wc_lang/migrations/__init__.py | 0 | A 0 mins | F 0% |
wc_lang/migrations/custom_io_classes.py | 7 | A 0 mins | F 0% |
wc_lang/sbml/__init__.py | 0 | A 0 mins | F 0% |
wc_lang/transform/create_implicit_dfba_ex_rxns.py | 83 | B 5 hrs | A 98% |
wc_lang/core.py | 4,288 | F 2 wks | A 99% |
wc_lang/__init__.py | 15 | A 0 mins | A 100% |
wc_lang/__main__.py | 325 | F 3 days | A 100% |
wc_lang/_version.py | 1 | A 0 mins | A 100% |
wc_lang/config/__init__.py | 1 | A 0 mins | A 100% |
wc_lang/config/core.py | 73 | A 0 mins | A 100% |
wc_lang/io.py | 249 | C 1 day | A 100% |
wc_lang/sbml/io.py | 207 | A 2 hrs | A 100% |
wc_lang/sbml/util.py | 876 | F 5 days | A 100% |
wc_lang/transform/__init__.py | 11 | A 0 mins | A 100% |
wc_lang/transform/change_value.py | 89 | A 0 mins | A 100% |
wc_lang/transform/core.py | 47 | A 0 mins | A 100% |
wc_lang/transform/create_implicit_dist_zero_init_concs.py | 31 | A 0 mins | A 100% |
wc_lang/transform/merge_submodels.py | 106 | F 3 days | A 100% |
wc_lang/transform/nullify_attrs.py | 35 | A 0 mins | A 100% |
wc_lang/transform/prep_for_sbml.py | 27 | A 0 mins | A 100% |
wc_lang/transform/prep_for_wc_sim.py | 34 | A 0 mins | A 100% |
wc_lang/transform/set_finite_dfba_flux_bounds.py | 62 | C 1 day | A 100% |
wc_lang/transform/split_reversible_reactions.py | 144 | D 2 days | A 100% |
wc_lang/util.py | 59 | A 0 mins | A 100% |
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.gitignore | |
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.karr_lab_build_utils.yml | |
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LICENSE | |
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MANIFEST.in | |
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README.md | |
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docs/about.rst | |
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docs/index.rst | |
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docs/installation.rst | |
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docs/overview.rst | |
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docs/references.bib | |
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docs/references.rst | |
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docs/requirements.rtd.txt | |
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docs/requirements.txt | |
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docs/tutorial.rst | |
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examples/jupyter_examples/Expression utils demo.ipynb | |
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examples/jupyter_examples/Math expressions.ipynb | |
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pytest.ini | |
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requirements.txt | |
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setup.cfg | |
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wc_lang/config/core.default.cfg | |
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wc_lang/config/core.schema.cfg | |
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wc_lang/config/debug.default.cfg | |
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wc_lang/grammar/evidences.lark | |
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wc_lang/grammar/identifiers.lark | |
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