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| .coveragerc | |
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| .karr_lab_build_utils.yml | |
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| LICENSE | |
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| docs/conf.py | 98 | A 0 mins |
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| examples/Read and plot wc_simulate dataframe.ipynb | |
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| examples/__init__.py | 0 | A 0 mins | F 0% |
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| examples/config/core.py | 33 | B 4 hrs |
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| examples/debug_logs.py | 10 | A 30 mins |
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| examples/simulation_run.py | 26 | A 0 mins | A 100% |
| examples/transcription_translation_hybrid_model/model.xlsx | |
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| examples/transcription_translation_hybrid_model/run_with_custom_code.py | 207 | B 6 hrs |
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| examples/transcription_translation_hybrid_model/run_with_wc_sim.py | 72 | C 1 day |
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| examples/translation_metabolism_hybrid_model/model.xlsx | |
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| examples/translation_metabolism_hybrid_model/run.py | 91 | F 3 days |
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| migrations/data_schema_migration_conf--wc_sim--wc_lang--2019-06-25-22-43-31.yaml | |
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| migrations/data_schema_migration_conf--wc_sim--wc_lang--2019-07-12-12-55-44.yaml | |
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| multialg_analysis/README.txt | |
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| multialg_analysis/code/analyze_ode_steps.py | 73 | A 50 mins |
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| multialg_analysis/data/plots/ode_modes_species_trajectories.pdf | |
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| presentation_2020_07_06_WC_sim_for_H1_model/expr_dependencies_figs.py | 21 | A 0 mins |
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| presentation_2020_07_06_WC_sim_for_H1_model/h1_model_properties.py | 98 | A 3 hrs |
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| setup.py | 60 | A 0 mins |
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| temp_wc_analysis/__init__.py | 0 | A 0 mins |
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| temp_wc_analysis/analysis.py | 76 | B 5 hrs |
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