LucaCappelletti94/encodeproject

View on GitHub

Showing 4 of 6 total issues

Function biosample has a Cognitive Complexity of 16 (exceeds 5 allowed). Consider refactoring.
Open

def biosample(
    accession: str,
    to_dataframe: bool = True,
    status: str = "released",
    organism: str = "human",
Severity: Minor
Found in encodeproject/query.py - About 2 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function download has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.
Open

def download(url: str, path: str = None, block_size: int = 32768, cache: bool = False, append: bool = False):
    """Download file at given url showing a loading bar.

    Parameters
    ----------------------
Severity: Minor
Found in encodeproject/utils.py - About 45 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function download has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

def download(url: str, path: str = None, block_size: int = 32768, cache: bool = False, append: bool = False):
Severity: Minor
Found in encodeproject/utils.py - About 35 mins to fix

    Function sample_files_informations has a Cognitive Complexity of 7 (exceeds 5 allowed). Consider refactoring.
    Open

    def sample_files_informations(sample: Dict) -> List[Dict]:
        """Return list of informations for every files in the sample.
            sample:Dict, the sample from which to extract the files informations.
        """
        if len(sample["files"]) == 0:
    Severity: Minor
    Found in encodeproject/utils.py - About 35 mins to fix

    Cognitive Complexity

    Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

    A method's cognitive complexity is based on a few simple rules:

    • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
    • Code is considered more complex for each "break in the linear flow of the code"
    • Code is considered more complex when "flow breaking structures are nested"

    Further reading

    Severity
    Category
    Status
    Source
    Language