Showing 4 of 4 total issues

Method add_trace_to_worker has 46 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    def add_trace_to_worker(worker_sample_blocks, worker_sh, output_prefix, params)  

      sample =  worker_sample_blocks[0][0]
      filename = sample+'/'+sample+'.log'
      workflow = params[:workflow]
Severity: Minor
Found in lib/ripe/worker_controller.rb - About 1 hr to fix

    Method initialize has a Cognitive Complexity of 12 (exceeds 5 allowed). Consider refactoring.
    Open

        def initialize(workflow, samples, output_prefix, params = {})
          
          # Checking for valid output_prefix
          if samples.length > 0 && !File.directory?(output_prefix)
            if output_prefix.include? "/"
    Severity: Minor
    Found in lib/ripe/worker_controller.rb - About 1 hr to fix

    Cognitive Complexity

    Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

    A method's cognitive complexity is based on a few simple rules:

    • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
    • Code is considered more complex for each "break in the linear flow of the code"
    • Code is considered more complex when "flow breaking structures are nested"

    Further reading

    Method initialize has 26 lines of code (exceeds 25 allowed). Consider refactoring.
    Open

        def initialize(workflow, samples, output_prefix, params = {})
          
          # Checking for valid output_prefix
          if samples.length > 0 && !File.directory?(output_prefix)
            if output_prefix.include? "/"
    Severity: Minor
    Found in lib/ripe/worker_controller.rb - About 1 hr to fix

      Method initialize has 5 arguments (exceeds 4 allowed). Consider refactoring.
      Open

          def initialize(sample, block, id, parent_worker, handle)
      Severity: Minor
      Found in lib/ripe/task.rb - About 35 mins to fix
        Severity
        Category
        Status
        Source
        Language