pombo-lab/gamtools

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NameLines of codeMaintainabilityTest coverage
.codeclimate.yml
.github/workflows/tox-test.yml
.gitignore
.pylintrc
.travis.yml
CHANGELOG.md
CONTRIBUTORS.md
Gam_Matrix_README.md
LICENSE
MANIFEST.in
README.md
docs/Makefile
docs/api_docs/gamtools.bias.rst
docs/api_docs/gamtools.call_windows.rst
docs/api_docs/gamtools.compaction.rst
docs/api_docs/gamtools.cosegregation.rst
docs/api_docs/gamtools.enrichment.rst
docs/api_docs/gamtools.matrix.rst
docs/api_docs/gamtools.npmi.rst
docs/api_docs/gamtools.permutation.rst
docs/api_docs/gamtools.radial_position.rst
docs/api_docs/gamtools.resolution.rst
docs/api_docs/gamtools.segregation.rst
docs/api_docs/index.rst
docs/conf.py43
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0 mins
docs/content/installation.rst
docs/content/overview.rst
docs/content/tutorial.rst
docs/img/chr19_30kb_matrix.png
docs/img/chr19_50kb_coseg_matrix.png
docs/img/chr19_50kb_matrix.png
docs/img/chr19_large_50kb_matrix.png
docs/index.rst
docs/make.bat
docs/tools/bias.rst
docs/tools/call_windows.rst
docs/tools/compaction.rst
docs/tools/convert.rst
docs/tools/enrichment.rst
docs/tools/matrix.rst
docs/tools/permute_segregation.rst
docs/tools/process_nps.rst
docs/tools/radial_pos.rst
docs/tools/resolution_qc.rst
docs/tools/select.rst
lib/gamtools/__init__.py11
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lib/gamtools/bias.py145
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0 mins
lib/gamtools/call_windows.py299
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4 hrs
lib/gamtools/compaction.py26
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1 hr
lib/gamtools/cosegregation.py444
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1 day