tomopy/tomopy

Building TomoPy
===============


Installing dependencies
-----------------------
To build and run TomoPy, you will need to install at least the dependencies
listed in ``envs/{platform}-{version}.yml`` plus additional dependencies based
on your platform. For convenience, installing requirements for building
the Python 3.6 version on Linux can be accomplished as follows::

    $ conda env create -f envs/linux-36.yml [-n ENVIRONMENT]

This will create a new conda environment named tomopy with the build
dependencies. If you already have a conda environment named tomopy. Use the
`-n` option to name it something else.

Additional Windows Requirements
```````````````````````````````
The Windows VC++2017 compiler cannot be distributed through conda. The conda
package for this compiler creates link from the system provided compiler
to the conda environment into which it is installed. Install VC++2017 using
the Windows Build Tools installer; Visual Studio (the IDE) is not required
to build TomoPy.

Additional CUDA Requirements
````````````````````````````
The CUDA compiler cannot be distributed through conda. Building TomoPy with
GPU features requires the CUDA Toolkit and NVCC.


Compiling TomoPy
----------------

TomoPy is built/packaged in two parts: the python-only modules and the
compiled shared libraries. The python module searches the library path at
import time for the compiled shared libraries and raises an error/warning
if they are not located. Because the compiled and python parts are sepeparate,
developing the python parts does not require building the compiled parts; the
compiled parts may be installed precompiled using conda.

TomoPy (the python-only modules)
````````````````````````````````

After navigating to inside the `tomopy` directory, you can install TomoPy by
running the install script in the typical Python way::

    $ pip install . --no-deps

libtomo (the compiled shared libraries)
```````````````````````````````````````

The shared libraries are a `CMake
<https://cmake.org/cmake/help/latest/index.html>`_ project which are installed
in the typical way::

    $ mkdir build
    $ cd build
    $ cmake .. -GNinja -DCMAKE_INSTALL_PREFIX=$CONDA_PREFIX -DCMAKE_INSTALL_LIBDIR=lib
    $ cmake --build .
    $ cmake --install .