yzhao062/Pyod

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File thresholds.py has 467 lines of code (exceeds 250 allowed). Consider refactoring.
Open

def AUCP(**kwargs):
    """AUCP class for Area Under Curve Precentage thresholder.

       Use the area under the curve to evaluate a non-parametric means
       to threshold scores generated by the decision_scores where outliers
Severity: Minor
Found in pyod/models/thresholds.py - About 7 hrs to fix

    Function generate_data_clusters has a Cognitive Complexity of 30 (exceeds 5 allowed). Consider refactoring.
    Open

    def generate_data_clusters(n_train=1000, n_test=500, n_clusters=2,
                               n_features=2, contamination=0.1, size='same',
                               density='same', dist=0.25, random_state=None,
                               return_in_clusters=False):
        """Utility function to generate synthesized data in clusters.
    Severity: Minor
    Found in pyod/utils/data.py - About 4 hrs to fix

    Cognitive Complexity

    Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

    A method's cognitive complexity is based on a few simple rules:

    • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
    • Code is considered more complex for each "break in the linear flow of the code"
    • Code is considered more complex when "flow breaking structures are nested"

    Further reading

    File dif.py has 324 lines of code (exceeds 250 allowed). Consider refactoring.
    Open

    # -*- coding: utf-8 -*-
    """Deep Isolation Forest for Anomaly Detection (DIF)
    """
    # Author: Hongzuo Xu <hongzuoxu@126.edu>
    # License: BSD 2 clause
    Severity: Minor
    Found in pyod/models/dif.py - About 3 hrs to fix

      File kpca.py has 324 lines of code (exceeds 250 allowed). Consider refactoring.
      Open

      # -*- coding: utf-8 -*-
      """Kernel Principal Component Analysis (KPCA) Outlier Detector
      """
      # Author: Akira Tamamori <tamamori5917@gmail.com>
      # License: BSD 2 clause
      Severity: Minor
      Found in pyod/models/kpca.py - About 3 hrs to fix

        Function generate_data_categorical has a Cognitive Complexity of 24 (exceeds 5 allowed). Consider refactoring.
        Open

        def generate_data_categorical(n_train=1000, n_test=500, n_features=2,
                                      n_informative=2, n_category_in=2,
                                      n_category_out=2, contamination=0.1,
                                      shuffle=True, random_state=None):
            """Utility function to generate synthesized categorical data.
        Severity: Minor
        Found in pyod/utils/data.py - About 3 hrs to fix

        Cognitive Complexity

        Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

        A method's cognitive complexity is based on a few simple rules:

        • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
        • Code is considered more complex for each "break in the linear flow of the code"
        • Code is considered more complex when "flow breaking structures are nested"

        Further reading

        Consider simplifying this complex logical expression.
        Open

            if (include_left and include_right) and (param < low or param > high):
                raise ValueError(
                    '{param_name} is set to {param}. '
                    'Not in the range of [{low}, {high}].'.format(
                        param=param, low=low, high=high, param_name=param_name))
        Severity: Critical
        Found in pyod/utils/utility.py - About 3 hrs to fix

          Function _calculate_outlier_scores has a Cognitive Complexity of 18 (exceeds 5 allowed). Consider refactoring.
          Open

          def _calculate_outlier_scores(X, bin_edges, hist, n_bins, alpha,
                                        tol):  # pragma: no cover
              """The internal function to calculate the outlier scores based on
              the bins and histograms constructed with the training data. The program
              is optimized through numba. It is excluded from coverage test for
          Severity: Minor
          Found in pyod/models/hbos.py - About 2 hrs to fix

          Cognitive Complexity

          Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

          A method's cognitive complexity is based on a few simple rules:

          • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
          • Code is considered more complex for each "break in the linear flow of the code"
          • Code is considered more complex when "flow breaking structures are nested"

          Further reading

          Function decision_function has a Cognitive Complexity of 18 (exceeds 5 allowed). Consider refactoring.
          Open

              def decision_function(self, X):
                  """Predict raw anomaly score of X using the fitted detector.
          
                  The anomaly score of an input sample is computed based on different
                  detector algorithms. For consistency, outliers are assigned with
          Severity: Minor
          Found in pyod/models/rgraph.py - About 2 hrs to fix

          Cognitive Complexity

          Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

          A method's cognitive complexity is based on a few simple rules:

          • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
          • Code is considered more complex for each "break in the linear flow of the code"
          • Code is considered more complex when "flow breaking structures are nested"

          Further reading

          Function _calculate_outlier_scores_auto has a Cognitive Complexity of 18 (exceeds 5 allowed). Consider refactoring.
          Open

          def _calculate_outlier_scores_auto(X, bin_edges, hist, alpha,
                                             tol):  # pragma: no cover
              """The internal function to calculate the outlier scores based on
              the bins and histograms constructed with the training data. The program
              is optimized through numba. It is excluded from coverage test for
          Severity: Minor
          Found in pyod/models/hbos.py - About 2 hrs to fix

          Cognitive Complexity

          Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

          A method's cognitive complexity is based on a few simple rules:

          • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
          • Code is considered more complex for each "break in the linear flow of the code"
          • Code is considered more complex when "flow breaking structures are nested"

          Further reading

          Function __init__ has 18 arguments (exceeds 4 allowed). Consider refactoring.
          Open

              def __init__(
          Severity: Major
          Found in pyod/models/kpca.py - About 2 hrs to fix

            Function scale_angles has a Cognitive Complexity of 16 (exceeds 5 allowed). Consider refactoring.
            Open

            def scale_angles(gammas, scaler1=None, scaler2=None):
                """
                Scale all angles in which angles <= 90
                degree will be scaled within [0 - 54.7] and
                angles > 90 will be scaled within [90 - 126]
            Severity: Minor
            Found in pyod/models/rod.py - About 2 hrs to fix

            Cognitive Complexity

            Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

            A method's cognitive complexity is based on a few simple rules:

            • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
            • Code is considered more complex for each "break in the linear flow of the code"
            • Code is considered more complex when "flow breaking structures are nested"

            Further reading

            Function _build_model has 52 lines of code (exceeds 25 allowed). Consider refactoring.
            Open

                def _build_model(self):
            
                    #### Decoder #####
                    dec_in = Input(shape=(self.latent_dim,), name='I1')
                    dec_1 = Dropout(self.dropout_rate)(dec_in)
            Severity: Major
            Found in pyod/models/alad.py - About 2 hrs to fix

              Function __init__ has 15 arguments (exceeds 4 allowed). Consider refactoring.
              Open

                  def __init__(self,
              Severity: Major
              Found in pyod/models/auto_encoder_torch.py - About 1 hr to fix

                Function __init__ has 15 arguments (exceeds 4 allowed). Consider refactoring.
                Open

                    def __init__(
                Severity: Major
                Found in pyod/models/kpca.py - About 1 hr to fix

                  Function __init__ has 15 arguments (exceeds 4 allowed). Consider refactoring.
                  Open

                      def __init__(self, c=None,
                  Severity: Major
                  Found in pyod/models/deep_svdd.py - About 1 hr to fix

                    Function __init__ has 15 arguments (exceeds 4 allowed). Consider refactoring.
                    Open

                        def __init__(self, activation_hidden='tanh',
                    Severity: Major
                    Found in pyod/models/anogan.py - About 1 hr to fix

                      Function active_support_elastic_net has a Cognitive Complexity of 14 (exceeds 5 allowed). Consider refactoring.
                      Open

                          def active_support_elastic_net(self, X, y, alpha, tau=1.0,
                                                         algorithm='lasso_lars', support_init='L2',
                                                         support_size=100, maxiter=40,
                                                         maxiter_lasso=1000):
                              """
                      Severity: Minor
                      Found in pyod/models/rgraph.py - About 1 hr to fix

                      Cognitive Complexity

                      Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

                      A method's cognitive complexity is based on a few simple rules:

                      • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
                      • Code is considered more complex for each "break in the linear flow of the code"
                      • Code is considered more complex when "flow breaking structures are nested"

                      Further reading

                      Function _build_model has a Cognitive Complexity of 14 (exceeds 5 allowed). Consider refactoring.
                      Open

                          def _build_model(self):
                      
                              #### Decoder #####
                              dec_in = Input(shape=(self.latent_dim,), name='I1')
                              dec_1 = Dropout(self.dropout_rate)(dec_in)
                      Severity: Minor
                      Found in pyod/models/alad.py - About 1 hr to fix

                      Cognitive Complexity

                      Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

                      A method's cognitive complexity is based on a few simple rules:

                      • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
                      • Code is considered more complex for each "break in the linear flow of the code"
                      • Code is considered more complex when "flow breaking structures are nested"

                      Further reading

                      Function __init__ has 13 arguments (exceeds 4 allowed). Consider refactoring.
                      Open

                          def __init__(
                      Severity: Major
                      Found in pyod/models/gmm.py - About 1 hr to fix

                        Function __init__ has 12 arguments (exceeds 4 allowed). Consider refactoring.
                        Open

                            def __init__(self, model_type="WEIGHT", n_neighbours=5, negative_sampling="MIXED",
                        Severity: Major
                        Found in pyod/models/lunar.py - About 1 hr to fix
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