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Function _execute has a Cognitive Complexity of 27 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, sources, alignment_stream, interval):
        sliding_window = sources[0].window(interval, force_calculation=True)
        try:
            t,doc = sliding_window.first()
            sliding_window_start = doc.start
Severity: Minor
Found in hyperstream/tools/sliding_listify/2016-12-02_v0.0.2.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 27 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, sources, alignment_stream, interval):
        sliding_window = sources[0].window(interval, force_calculation=True)
        try:
            t,doc = sliding_window.first()
            sliding_window_start = doc.start
Severity: Minor
Found in hyperstream/tools/sliding_listify/2016-12-02_v0.0.3.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 26 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, source, splitting_stream, interval, meta_data_id, output_plate_values):
        # time intervals could be a TimeIntervals object, a list of TimeInterval objects,
        # or a list of tuples of plate ids and TimeInterval objects
        try:
            time_intervals = splitting_stream.window(interval, force_calculation=True).last().value
Severity: Minor
Found in hyperstream/tools/splitter_time_aware_from_stream/2016-10-06_v0.0.1.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 26 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, sources, alignment_stream, interval):
        sliding_window = sources[0].window(interval, force_calculation=True)
        data = iter(sources[1].window(interval, force_calculation=True))
        
        window = []
Severity: Minor
Found in hyperstream/tools/sliding_listify/2016-12-02_v0.0.1.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 26 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, source, splitting_stream, interval, meta_data_id, output_plate_values):
        if splitting_stream is not None:
            raise NotImplementedError("This tool expects the splitting to be provided as a parameter")

        # time intervals could be a TimeIntervals object, a list of TimeInterval objects,
Severity: Minor
Found in hyperstream/tools/splitter_time_aware/2016-10-06_v0.0.1.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 25 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, source, splitting_stream, interval, meta_data_id,
                 output_plate_values):

        # Let's make the assumption that the first field is the timestamp
Severity: Minor
Found in plugins/data_importers/tools/csv_multi_reader/2017-07-21_v0.0.1.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function execute has a Cognitive Complexity of 25 (exceeds 5 allowed). Consider refactoring.
Open

    def execute(self, sources, sinks, interval):
        """
        Execute the tool over the given time interval.

        :param sources: The source streams
Severity: Minor
Found in hyperstream/tool/selector_tool.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function execute has a Cognitive Complexity of 24 (exceeds 5 allowed). Consider refactoring.
Open

    def execute(self, time_interval):
        """
        Execute the factor over the given time interval. Note that this is normally done by the workflow,
        but can also be done on the factor directly
Severity: Minor
Found in hyperstream/factor/factor.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 24 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, sources, alignment_stream, interval):
        for time, data in sources[0].window(interval, force_calculation=True):
            dict_sum = self.start_dict
            if dict_sum is None:
                dict_sum = dict()
Severity: Minor
Found in hyperstream/tools/list_dict_sum/2017-03-03_v0.0.1.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 23 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, sources, alignment_stream, interval):
        data_stream = sources[0]

        data = iter(data_stream.window(interval + self.relative_interval))
Severity: Minor
Found in hyperstream/tools/relative_window/2016-09-09_v0.0.1.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 23 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, source, splitting_stream, interval, meta_data_id, output_plate_values):
        for timestamp, data in source.window(interval, force_calculation=True):
            if self.element is None:
                data_element = data
            else:
Severity: Minor
Found in hyperstream/tools/asset_splitter/2017-03-17_v0.2.0.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _Tree__print_backend has a Cognitive Complexity of 22 (exceeds 5 allowed). Consider refactoring.
Open

    def _Tree__print_backend(self, nid=None, level=ROOT, idhidden=True, queue_filter=None,
                             key=None, reverse=False, line_type='ascii-emv',
                             data_property=None, func=print, iflast=None):
        """
        Another implementation of printing tree using Stack
Severity: Minor
Found in hyperstream/utils/containers.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 22 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, source, splitting_stream, interval, meta_data_id, output_plate_values):
        if splitting_stream is None:
            raise ValueError("Splitting stream required for this tool")

        if isinstance(splitting_stream, AssetStream):
Severity: Minor
Found in hyperstream/tools/splitter_from_stream/2016-12-12_v0.0.2.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

File workflow_manager.py has 292 lines of code (exceeds 250 allowed). Consider refactoring.
Open

# The MIT License (MIT)
# Copyright (c) 2014-2017 University of Bristol
# 
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
Severity: Minor
Found in hyperstream/workflow/workflow_manager.py - About 3 hrs to fix

Function get_plate_values has a Cognitive Complexity of 20 (exceeds 5 allowed). Consider refactoring.
Open

    def get_plate_values(self, plate_definition):
        """
        Gets the plate values from the global meta data according to the given plate definition
        :param plate_definition: The plate definition
        :return: The plate values
Severity: Minor
Found in hyperstream/plate/plate_manager.py - About 2 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function to_dict has a Cognitive Complexity of 20 (exceeds 5 allowed). Consider refactoring.
Open

    def to_dict(self, tool_long_names=True):
        """
        Get a representation of the workflow as a dictionary for display purposes

        :param tool_long_names: Indicates whether to use long names, such as
Severity: Minor
Found in hyperstream/workflow/workflow.py - About 2 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function update_channels has a Cognitive Complexity of 20 (exceeds 5 allowed). Consider refactoring.
Open

    def update_channels(self):
        """
        Pulls out all of the stream definitions from the database, and populates the channels with stream references
        """
        logging.info("Updating channels")
Severity: Minor
Found in hyperstream/channels/channel_manager.py - About 2 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 20 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, sources, alignment_stream, interval):
        sliding_window = sources[0].window(interval, force_calculation=True)
        data = iter(sources[1].window(interval, force_calculation=True))
        
        window = []
Severity: Minor
Found in hyperstream/tools/sliding_apply/2016-09-05_v0.0.1.py - About 2 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function check_input_stream_count has a Cognitive Complexity of 19 (exceeds 5 allowed). Consider refactoring.
Open

def check_input_stream_count(expected_number_of_streams):
    """
    Decorator for Tool._execute that checks the number of input streams

    :param expected_number_of_streams: The expected number of streams
Severity: Minor
Found in hyperstream/utils/decorators.py - About 2 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function _execute has a Cognitive Complexity of 19 (exceeds 5 allowed). Consider refactoring.
Open

    def _execute(self, sources, alignment_stream, interval):
        for tt, rows in sources[0].window(interval, force_calculation=True):
            values = defaultdict(list)

            for row in rows:
Severity: Minor
Found in hyperstream/tools/relative_apply2/2016-09-11_v0.0.2.py - About 2 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

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