Function formatResults has 105 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  formatResults(data, organism) {
    const results = data["top_kos"]["buckets"];
    const numResults = data["total_buckets"]["value"];

    const formattedResults = [];

Function getColDefs has 102 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  static getColDefs(query, organism, formattedData, taxonomicRanks) {
    const colDefs = [
      {
        headerName: "Modifications",
        field: "numModifications",

Function formatMetadata has 101 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  static formatMetadata(query, organism, processedData) {
    const sections = [];

    sections.push({
      id: "id",

Function getSideBarDef has 93 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  static getSideBarDef(query, organism, formattedData) {
    const sideBar = {
      toolPanels: [
        {
          id: "columns",

Function render has 91 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  render() {
    if (this.state.metadata && this.state.metadata.error404) {
      return <Error404 />;
    }

File Tutorial.js has 317 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import React, { Component } from "react";
import LazyLoad from "react-lazyload";
import one_home from "./images/1_home.png";
import search_top from "./images/searchBarTop.png";
import two_intermediate from "./images/2_intermediate.png";

Function configChart has 85 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  configChart() {
    if (!this.props.data.values.length) {
      return;
    }

Function formatData has a Cognitive Complexity of 23 (exceeds 5 allowed). Consider refactoring.

Open

  static formatData(query, organism, rawData) {
    const formattedData = [];

    for (const datum of rawData) {
      let enzymeName = null;

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Function getColDefs has a Cognitive Complexity of 23 (exceeds 5 allowed). Consider refactoring.

Open

  static getColDefs(query, organism, formattedData, taxonomicRanks) {
    const colDefs = [
      {
        headerName: "Concentration",
        field: "value",

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File ProteinModificationDataTable.js has 302 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import React, { Component } from "react";
import PropTypes from "prop-types";
import {
  getNumProperties,
  upperCaseFirstLetter,

Function processRelatedReactions has 76 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  static processRelatedReactions(organism, relatedReactions) {
    const formattedResults = [];

    for (const reaction of relatedReactions) {
      const id = reaction.kinlaw_id;

File ProteinAbundanceDataTable.js has 293 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import React, { Component } from "react";
import PropTypes from "prop-types";
import { getNumProperties, upperCaseFirstLetter } from "~/utils/utils";
import DataTable from "../DataTable/DataTable";
import { HtmlColumnHeader } from "../HtmlColumnHeader";

Function FullSiteRouter has 75 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  let FullSiteRouter = () => {
    return (
      <ErrorBoundary>
        <BrowserRouter>
          <ScrollToTop />

Function getDataFromApi has 74 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  getDataFromApi() {
    const route = parseHistoryLocationPathname(this.props.history);
    const query = route.query;
    const organism = route.organism;

Function processMetadata has a Cognitive Complexity of 21 (exceeds 5 allowed). Consider refactoring.

Open

  static processMetadata(query, organism, rawData) {
    let processedData = {};
    const met = rawData;
    processedData = {};
    processedData.synonyms = null;

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Function updateFilters has a Cognitive Complexity of 21 (exceeds 5 allowed). Consider refactoring.

Open

  updateFilters(event) {
    const filters = [];
    for (const colApi of event.columnApi.getAllGridColumns()) {
      const colDef = colApi.colDef;

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File utils.js has 286 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import React from "react";

function matchAll(string, regex) {
  const matches = [];
  string.replace(regex, function () {

File MetadataSection.js has 285 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import React, { Component } from "react";
import PropTypes from "prop-types";
import BaseMetadataSection from "../MetadataSection";
import { Link } from "react-router-dom";
import { LoadMetabolites } from "../LoadContent";

Function render has 70 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  render() {
    if (this.state.all.values == null) {
      return <div></div>;
    } else {
      return (

Function configChart has 69 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  configChart() {
    if (!this.props.data.values.length) {
      return;
    }