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File FSMRTemplateImpl.java has 567 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*******************************************************************************
 * Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
 * <p>
 * This program is free software: you can redistribute it and/or modify it under the terms of the
 * GNU General Public License as published by the Free Software Foundation, either version 3 of the
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/openfsmr/FSMRTemplateImpl.java - About 1 day to fix

File bootstrap-touchspin.js has 566 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*
 *  Bootstrap TouchSpin - v4.2.5
 *  A mobile and touch friendly input spinner component for Bootstrap 3 & 4.
 *  http://www.virtuosoft.eu/code/bootstrap-touchspin/
 *
Severity: Major
Found in de.bund.bfr.knime.js/src/js/lib/bootstrap-touchspin.js - About 1 day to fix

Method getTimeSeriesTuples has 239 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    public Map<String, KnimeTuple> getTimeSeriesTuples(File file, String sheet, Map<String, Object> columnMappings,
            String timeUnit, String concentrationUnit, String agentColumnName, Map<String, AgentXml> agentMappings,
            String matrixColumnName, Map<String, MatrixXml> matrixMappings, boolean preserveIds, List<Integer> usedIds)
                    throws Exception {
        Workbook wb = getWorkbook(file);
Severity: Major
Found in de.bund.bfr.knime.pmm.common/src/de/bund/bfr/knime/pmm/common/XLSReader.java - About 1 day to fix

File PlausibilityChecker.java has 563 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*******************************************************************************
 * Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
Severity: Major
Found in org.hsh.bfr.db/src/org/hsh/bfr/db/PlausibilityChecker.java - About 1 day to fix

OtherModelGeneralInformation has 65 methods (exceeds 20 allowed). Consider refactoring.
Open

@javax.annotation.Generated(value = "io.swagger.codegen.languages.JavaClientCodegen", date = "2019-07-02T16:22:48.194+02:00")
public class OtherModelGeneralInformation {
  @SerializedName("name")
  private String name = null;
Severity: Major
Found in de.bund.bfr.knime.fsklab.metadata.model/gen/de/bund/bfr/metadata/swagger/OtherModelGeneralInformation.java - About 1 day to fix

DoseResponseModelGeneralInformation has 65 methods (exceeds 20 allowed). Consider refactoring.
Open

@javax.annotation.Generated(value = "io.swagger.codegen.languages.JavaClientCodegen", date = "2019-07-02T16:22:48.194+02:00")
public class DoseResponseModelGeneralInformation {
  @SerializedName("modelName")
  private String modelName = null;
Severity: Major
Found in de.bund.bfr.knime.fsklab.metadata.model/gen/de/bund/bfr/metadata/swagger/DoseResponseModelGeneralInformation.java - About 1 day to fix

GenericModelGeneralInformation has 65 methods (exceeds 20 allowed). Consider refactoring.
Open

@javax.annotation.Generated(value = "io.swagger.codegen.languages.JavaClientCodegen", date = "2019-07-02T16:22:48.194+02:00")
public class GenericModelGeneralInformation {
  @SerializedName("name")
  private String name = null;
Severity: Major
Found in de.bund.bfr.knime.fsklab.metadata.model/gen/de/bund/bfr/metadata/swagger/GenericModelGeneralInformation.java - About 1 day to fix

PredictiveModelGeneralInformation has 65 methods (exceeds 20 allowed). Consider refactoring.
Open

@javax.annotation.Generated(value = "io.swagger.codegen.languages.JavaClientCodegen", date = "2019-07-02T16:22:48.194+02:00")
public class PredictiveModelGeneralInformation {
  @SerializedName("name")
  private String name = null;
Severity: Major
Found in de.bund.bfr.knime.fsklab.metadata.model/gen/de/bund/bfr/metadata/swagger/PredictiveModelGeneralInformation.java - About 1 day to fix

MyDBPanel has 65 methods (exceeds 20 allowed). Consider refactoring.
Open

public class MyDBPanel extends JPanel {
    
    /**
     * 
     */
Severity: Major
Found in org.hsh.bfr.db/src/org/hsh/bfr/db/gui/dbtable/MyDBPanel.java - About 1 day to fix

File WriterNodeModel.java has 562 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*
 ***************************************************************************************************
 * Copyright (c) 2017 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify it under the terms of the
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_9_0/de/bund/bfr/knime/fsklab/v1_9/writer/WriterNodeModel.java - About 1 day to fix

Function compile has 236 lines of code (exceeds 25 allowed). Consider refactoring.
Open

function compile(schema, root, localRefs, baseId) {
  /* jshint validthis: true, evil: true */
  /* eslint no-shadow: 0 */
  var self = this
    , opts = this._opts
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/js-src/de/bund/bfr/knime/fsklab/nodes/joiner/emfbundle/ajv.min.js - About 1 day to fix

Method computeSecondary has a Cognitive Complexity of 60 (exceeds 5 allowed). Consider refactoring.
Open

    public static List<KnimeTuple> computeSecondary(List<KnimeTuple> tuples) {
        Set<String> idSet = new LinkedHashSet<>();
        Map<String, String> formulaMap = new LinkedHashMap<>();
        Map<String, PmmXmlDoc> paramMap = new LinkedHashMap<>();
        Map<String, String> depVarMap = new LinkedHashMap<>();
Severity: Minor
Found in de.bund.bfr.knime.pmm.common/src/de/bund/bfr/knime/pmm/common/QualityMeasurementComputation.java - About 1 day to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

File ProcessParametersImpl.java has 556 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*
 * XML Type:  ProcessParameters
 * Namespace: http://www.bfr.bund.de/PCML-1_0
 * Java type: de.bund.bfr.pcml10.ProcessParameters
 *
Severity: Major
Found in de.bund.bfr.knime.foodprocess.pcml/lib/src/de/bund/bfr/pcml10/impl/ProcessParametersImpl.java - About 1 day to fix

SettingsHelper has 64 methods (exceeds 20 allowed). Consider refactoring.
Open

public class SettingsHelper {

    private static final String CFG_SELECTEDIDS = "SelectedIDs";
    private static final String CFG_PARAMXVALUES = "ParamXValues";
    private static final String CFG_TIMEVALUES = "TimeValues";
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/predictorview/SettingsHelper.java - About 1 day to fix

MyDBTable has 64 methods (exceeds 20 allowed). Consider refactoring.
Open

public class MyDBTable extends DBTable implements RowSorterListener, KeyListener, ListSelectionListener, MouseListener  {
    
    /**
     * 
     */
Severity: Major
Found in org.hsh.bfr.db/src/org/hsh/bfr/db/gui/dbtable/MyDBTable.java - About 1 day to fix

Method execute has 233 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    @Override
    protected BufferedDataTable[] execute(final BufferedDataTable[] inData, final ExecutionContext exec) throws Exception {

        db = null;
        /*
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelwriter/EstimatedModelWriterNodeModel.java - About 1 day to fix

Method itemStateChanged has a Cognitive Complexity of 59 (exceeds 5 allowed). Consider refactoring.
Open

        @Override
        public void itemStateChanged(ItemEvent e) {
            if (e.getStateChange() == ItemEvent.SELECTED) {
                for (String column : mappingBoxes.keySet()) {
                    if (e.getSource() == mappingBoxes.get(column)) {
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/timeseriescreator/TimeSeriesCreatorNodeDialog.java - About 1 day to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

File JoinerNodeModel.java has 551 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*
 ***************************************************************************************************
 * Copyright (c) 2017 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify it under the terms of the
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_9_0/de/bund/bfr/knime/fsklab/v1_9/joiner/JoinerNodeModel.java - About 1 day to fix

File editor.js has 551 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*jshint esversion: 6 */
/* global $ */
metadata_editor = function() {

    var softwareDic = {
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/js-src/de/bund/bfr/knime/fsklab/nodes/metadataeditor/editor.js - About 1 day to fix

File SecondaryJoiner.java has 550 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*******************************************************************************
 * Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/modelanddatajoiner/SecondaryJoiner.java - About 1 day to fix
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