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SiLeBAT/FSK-Lab

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Showing 6,856 of 14,752 total issues

Method equals has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  @Override
  public boolean equals(java.lang.Object o) {
    if (this == o) {
      return true;
    }
Severity: Minor
Found in de.bund.bfr.knime.fsklab.metadata.model/gen/de/bund/bfr/metadata/swagger/OtherModelGeneralInformation.java - About 1 hr to fix

Method saveToNodeSettings has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    @Override
    public void saveToNodeSettings(NodeSettingsWO settings) {
        settings.addString(ModelPlotterViewConfig.CHART_TITLE, getChartTitle());
        settings.addDouble(ModelPlotterViewConfig.Y0, getY0());
        settings.addString(ModelPlotterViewConfig.FUNCTION, getFunc());
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/js/modelplotter/ModelPlotterViewValue.java - About 1 hr to fix

Method equals has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  @Override
  public boolean equals(java.lang.Object o) {
    if (this == o) {
      return true;
    }
Severity: Minor
Found in de.bund.bfr.knime.fsklab.metadata.model/gen/de/bund/bfr/metadata/swagger/PredictiveModelGeneralInformation.java - About 1 hr to fix

Method saveSettingsTo has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    @Override
    protected void saveSettingsTo(NodeSettingsWO settings)
            throws InvalidSettingsException {
        set.setSelectedIDs(selectionPanel.getSelectedIDs());
        set.setColors(selectionPanel.getColors());
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/primarymodelviewandselect/PrimaryModelViewAndSelectNodeDialog.java - About 1 hr to fix

Method equals has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  @Override
  public boolean equals(java.lang.Object o) {
    if (this == o) {
      return true;
    }
Severity: Minor
Found in de.bund.bfr.knime.fsklab.metadata.model/gen/de/bund/bfr/metadata/swagger/GenericModelGeneralInformation.java - About 1 hr to fix

Method equals has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  @Override
  public boolean equals(java.lang.Object o) {
    if (this == o) {
      return true;
    }
Severity: Minor
Found in de.bund.bfr.knime.fsklab.metadata.model/gen/de/bund/bfr/metadata/swagger/DoseResponseModelGeneralInformation.java - About 1 hr to fix

Method buttonPressed has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    @Override
    public void buttonPressed() {
        InitParamDialog dialog = new InitParamDialog(getPanel(), tuples,
                set.getConcentrationParameters(), set.getLagParameters());
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/predictorview/PredictorViewNodeDialog.java - About 1 hr to fix

Method fileChanged has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    @Override
    public void fileChanged(FilePanel source) {
        set.setFileName(filePanel.getFileName());

        try {
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/xlstimeseriesreader/XLSTimeSeriesReaderNodeDialog.java - About 1 hr to fix

Method saveSettings has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    public void saveSettings(NodeSettingsWO settings) {
        settings.addString(CFGKEY_ADDEDCONDITIONS,
                XmlConverter.objectToXml(addedConditions));
        settings.addString(CFGKEY_ADDEDCONDITIONVALUES,
                XmlConverter.objectToXml(addedConditionValues));
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/microbialdataedit/SettingsHelper.java - About 1 hr to fix

Method createOutputDataTables has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private BufferedDataTable[] createOutputDataTables(final ExecutionContext exec) {
        ModelPlotterViewValue value = getViewValue();
        DataTableSpec[] outSpces = createOutputDataTableSpecs();
        
        BufferedDataContainer constBC = exec.createDataContainer(outSpces[0]);
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/js/modelplotter/ModelPlotterNodeModel.java - About 1 hr to fix

Method getDBLits has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  public synchronized static List<LiteratureItem> getDBLits() {
    if (dbLits == null) {
      dbLits = new LinkedList<>();

      try (ResultSet rs = DBKernel.getResultSet("SELECT * FROM \"Literatur\"", true)) {
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/dbutil/DBLits.java - About 1 hr to fix

Method write has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

        @Override
        public void write(List<KnimeTuple> tuples, boolean isPMFX, String dir, String mdName, Metadata metadata,
                boolean splitModels, String notes, ExecutionContext exec) throws Exception {

            // Group tuples according to its secondary model
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/common/writer/WriterUtils.java - About 1 hr to fix

Method readSecondaryTable has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private void readSecondaryTable(BufferedDataTable table) {
        readPrimaryTable(table);

        KnimeRelationReader reader = new KnimeRelationReader(
                SchemaFactory.createM2Schema(), table);
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/modelestimation/ModelEstimationNodeDialog.java - About 1 hr to fix

Method write has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

        @Override
        public void write(List<KnimeTuple> tuples, boolean isPMFX, String dir, String mdName, Metadata metadata,
                boolean splitModels, String notes, ExecutionContext exec) throws Exception {

            // Group tuples according to its secondary model
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/common/writer/WriterUtils.java - About 1 hr to fix

Method configure has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    @Override
    protected DataTableSpec[] configure(final DataTableSpec[] inSpecs)
            throws InvalidSettingsException {
        if (set.getFittingType().equals(SettingsHelper.NO_FITTING)) {
            throw new InvalidSettingsException("Node has to be configured!");
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/modelestimation/ModelEstimationNodeModel.java - About 1 hr to fix

Method readPrimaryTable has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private void readPrimaryTable(BufferedDataTable table) {
        parameterLimits = new LinkedHashMap<>();

        KnimeRelationReader reader = new KnimeRelationReader(
                SchemaFactory.createM1Schema(), table);
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/modelestimation/ModelEstimationNodeModel.java - About 1 hr to fix

Method mergeTuples has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  private static KnimeTuple mergeTuples(final KnimeTuple dataTuple, final KnimeTuple m1Tuple) {
    final KnimeTuple tuple = new KnimeTuple(SchemaFactory.createM1DataSchema());

    // Copies data columns
    tuple.setValue(TimeSeriesSchema.ATT_CONDID, dataTuple.getInt(TimeSeriesSchema.ATT_CONDID));
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/sbmlreader/SBMLReaderNodeModel.java - About 1 hr to fix

Method writeSettingsToVariables has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private void writeSettingsToVariables() {
        if (!selectionPanel.getSelectedIDs().isEmpty()) {
            set.setSelectedID(selectionPanel.getSelectedIDs().get(0));
        } else {
            set.setSelectedID(null);
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/fittedparameterview/FittedParameterViewNodeDialog.java - About 1 hr to fix

Method readSecondaryTable has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private void readSecondaryTable(BufferedDataTable table) {
        readPrimaryTable(table);

        KnimeRelationReader reader = new KnimeRelationReader(
                SchemaFactory.createM2Schema(), table);
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/modelestimation/ModelEstimationNodeModel.java - About 1 hr to fix

Method combase2XMLNew has 26 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private PmmXmlDoc combase2XMLNew(String misc) {
        PmmXmlDoc result = null;
        if (misc != null) {
            result = new PmmXmlDoc();
            for (String s : misc.split(";")) {
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/combaseio/lib/CombaseReader.java - About 1 hr to fix
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