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SiLeBAT/FSK-Lab

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Showing 6,856 of 14,752 total issues

Method getCachedTable has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

    private ResultSet getCachedTable(String cacheTable, String selectSQL, String whereSQL, String cacheWhereSQL, String[] relevantTables) throws SQLException {
Severity: Minor
Found in de.bund.bfr.knime.pmm.bfrdbiface.lib/src/de/bund/bfr/knime/pmm/bfrdbiface/lib/Bfrdb.java - About 35 mins to fix

Method createSBML has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  private static SBMLDocument createSBML(FskPortObject fskObj, CombineArchive archive,
      String ModelId, Map<String, URI> URIS, String filePrefix) throws IOException {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_9_0/de/bund/bfr/knime/fsklab/v1_9/writer/WriterNodeModel.java - About 35 mins to fix

Method createExtSubModel has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  public static ExternalModelDefinition createExtSubModel(SBMLDocument doc, String externalFileName,
      CompSBMLDocumentPlugin compDoc, CompModelPlugin compMainModel, String subModelName)
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_9_0/de/bund/bfr/knime/fsklab/v1_9/writer/WriterNodeModel.java - About 35 mins to fix

Method getListCellRendererComponent has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

      public Component getListCellRendererComponent(JList list, Object value, int index,
          boolean isSelected, boolean cellHasFocus) {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_9_0/de/bund/bfr/knime/fsklab/v1_9/CombinedFskPortObject.java - About 35 mins to fix

Method getListCellRendererComponent has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

      public Component getListCellRendererComponent(JList list, Object value, int index,
          boolean isSelected, boolean cellHasFocus) {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_9_0/de/bund/bfr/knime/fsklab/v1_9/FskPortObject.java - About 35 mins to fix

Method stepIntoSubModel has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  private FskPortObject stepIntoSubModel(FskPortObject fskObj,
      FskSimulation fskSimulation,
      LinkedHashMap<String, String> orignialParameters,
      ScriptHandler handler,
      final ExecutionContext exec ) {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_9_0/de/bund/bfr/knime/fsklab/v1_9/runner/RunnerNodeModel.java - About 35 mins to fix

Method createExtSubModel has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  public static ExternalModelDefinition createExtSubModel(SBMLDocument doc, String externalFileName,
      CompSBMLDocumentPlugin compDoc, CompModelPlugin compMainModel, String subModelName)
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_7_2/de/bund/bfr/knime/fsklab/nodes/v1_7_2/writer/WriterNodeModel.java - About 35 mins to fix

Method runFskPortObject has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  public FskPortObject runFskPortObject(FskPortObject fskObj,
      FskSimulation combinedSim,
      ExecutionContext exec,
      List<JoinRelationAdvanced> joinRelationList,
      String suffix) throws Exception {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/v2_0/runner/RunnerNodeModel.java - About 35 mins to fix

Method runSnippet has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

      final FskPortObject fskObj,
      final FskSimulation simulation,
      final ExecutionContext exec,
      List<JoinRelationAdvanced> joinRelationList,
      String suffix) throws Exception {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/v2_0/runner/RunnerNodeModel.java - About 35 mins to fix

Method runSnippet has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  public final void runSnippet(final FskPortObject fskObj, final FskSimulation simulation,
      final ExecutionContext exec, NodeLogger LOGGER, File imageFile) throws Exception {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_9_0/de/bund/bfr/knime/fsklab/nodes/v1_9/ScriptHandler.java - About 35 mins to fix

Method getListCellRendererComponent has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

            public Component getListCellRendererComponent(JList list, Object value, int index, boolean isSelected,
                    boolean cellHasFocus) {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_7_2/de/bund/bfr/knime/fsklab/FskPortObject.java - About 35 mins to fix

Method createSBML has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  private static SBMLDocument createSBML(FskPortObject fskObj, CombineArchive archive,
      String ModelId, Map<String, URI> URIS, String filePrefix) throws IOException {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_7_2/de/bund/bfr/knime/fsklab/nodes/v1_7_2/writer/WriterNodeModel.java - About 35 mins to fix

Method getListCellRendererComponent has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

            public Component getListCellRendererComponent(JList list, Object value, int index, boolean isSelected,
                    boolean cellHasFocus) {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_7_2/de/bund/bfr/knime/fsklab/CombinedFskPortObject.java - About 35 mins to fix

Method createExtSubModel has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  public static ExternalModelDefinition createExtSubModel(SBMLDocument doc, String externalFileName,
      CompSBMLDocumentPlugin compDoc, CompModelPlugin compMainModel, String subModelName)
Severity: Minor
Found in de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/v2_0/writer/WriterNodeModel.java - About 35 mins to fix

Method generateColorMap has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  public static LinkedHashMap<String, Object[]> generateColorMap(FskPortObject portObject,
      LinkedHashMap<String, Object[]> originalNamesMap, List<Parameter> topLevelJoinedModelParams, 
       AtomicInteger index, AtomicInteger generatedColorInt) {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/v2_0/joiner/JoinerNodeUtil.java - About 35 mins to fix

Method writeFSKObject has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  public static void writeFSKObject(FskPortObject fskObj, CombineArchive archive, String filePrefix,
      Map<String, URI> URIS, ScriptHandler scriptHandler) throws Exception {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/v2_0/writer/WriterNodeModel.java - About 35 mins to fix

Method createSBML has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  private static SBMLDocument createSBML(FskPortObject fskObj, CombineArchive archive,
      String ModelId, Map<String, URI> URIS, String filePrefix) throws IOException {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/v2_0/writer/WriterNodeModel.java - About 35 mins to fix

Method addParameter has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  public void addParameter(Parameter parameter, String modelId, String data, String parameterType,
      String language) {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/nodes/ParameterJson.java - About 35 mins to fix

Method addIdentifierToParametersAndStoreInMap has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  private static void addIdentifierToParametersAndStoreInMap(FskPortObject portObject,
      String suffix, int suffixInsertionIndex,
      final Map<String, List<String>> unModifiedParamsNames,
      Map<String, Map<String, String>> old_new_pramsMap) {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/v2_0/joiner/JoinerNodeUtil.java - About 35 mins to fix

Method getParameterMap has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  private static Map<String, List<String>> getParameterMap(FskPortObject jFirstInputPort,
      FskPortObject jSecondInputPort, FskPortObject jThirdInputPort, FskPortObject jFourthInputPort,
      Map<String, FskPortObject> fskID_to_fskObject) {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/v2_0/joiner/JoinerNodeModel.java - About 35 mins to fix
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