File useGraph.js has 388 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import { reactive, computed, toRefs } from 'vue'
import {
  BiologicalAssociation,
  BiologicalAssociationGraph,
  Citation

Class Autocomplete has 39 methods (exceeds 20 allowed). Consider refactoring.

Open

  class Query::Autocomplete < Queries::Query

    include Arel::Nodes

    include Queries::Concerns::Identifiers

Class Result has 39 methods (exceeds 20 allowed). Consider refactoring.

Open

    class Result
      # query string
      attr_accessor :name

      # how to match

Method using_iccn_class has a Cognitive Complexity of 34 (exceeds 5 allowed). Consider refactoring.

Open

  def using_iccn_class
    unless identifier.nil?
      lccn = identifier

      # '200112345', '2010549727', '2003064850', '|a  2003064850', '88156495', '68-004897', '2001-459440'

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Function handleEvents has 127 lines of code (exceeds 25 allowed). Consider refactoring.

Open

FilterHub.prototype.handleEvents = function (that) {
  const elements = [...document.querySelectorAll('#task_carrousel')]

  that.arrayTasks = elements.map(
    (element) =>

File dwc_extensions.rb has 371 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module FieldOccurrence::DwcExtensions

  extend ActiveSupport::Concern

  # include FieldOccurrence::DwcExtensions::TaxonworksExtensions

Function makeInitialState has 120 lines of code (exceeds 25 allowed). Consider refactoring.

Open

function makeInitialState() {
  return {
    loadState: {
      assertedDistribution: false,
      biologicalAssociations: true,

Function init has a Cognitive Complexity of 32 (exceeds 5 allowed). Consider refactoring.

Open

  init: function () {
    let softValidations

    function fillSoftValidation() {
      if (!softValidations) {

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Method add_original_combination has a Cognitive Complexity of 32 (exceeds 5 allowed). Consider refactoring.

Open

  def self.add_original_combination(t, csv, origin_citation, name_remarks_vocab_id, project_members)
    e = t.original_combination_elements

    infraspecific_element = t.original_combination_infraspecific_element(e, remove_sic: true)

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Class TaxonNamesController has 35 methods (exceeds 20 allowed). Consider refactoring.

Open

class TaxonNamesController < ApplicationController
  include DataControllerConfiguration::ProjectDataControllerConfiguration

  before_action :set_taxon_name, only: [:show, :edit, :update, :destroy, :browse, :original_combination, :catalog, :api_show, :api_summary, :api_catalog]
  after_action -> { set_pagination_headers(:taxon_names) }, only: [:index, :api_index, :origin_citation], if: :json_request?

Class Data has 35 methods (exceeds 20 allowed). Consider refactoring.

Open

  class Data

    attr_accessor :data

    attr_accessor :eml

Method sv_species_gender_agreement has a Cognitive Complexity of 30 (exceeds 5 allowed). Consider refactoring.

Open

    def sv_species_gender_agreement
      if is_species_rank?
        s = part_of_speech_name
        if !s.nil? && is_available?
          if %w{adjective participle}.include?(s)

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Class Filter has 34 methods (exceeds 20 allowed). Consider refactoring.

Open

  class Query::Filter < Queries::Query

    include Queries::Concerns::Users
    # include Queries::Concerns::Identifiers # Presently in Queries for other use in autocompletes

Method coordinates_regex_from_verbatim_label has 108 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    def self.coordinates_regex_from_verbatim_label(text)
      return nil if text.blank?
      text = text.gsub("''", '"')
        .gsub('´´', '"')
        .gsub('ʹʹ', '"')

Method using_isbn_class has a Cognitive Complexity of 29 (exceeds 5 allowed). Consider refactoring.

Open

  def using_isbn_class
    unless identifier.nil?
      isbn = identifier.upcase
      # 'ISBN-13: 978-0-596-52068-7'
      isbn.gsub!('ISBN-10', '')

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Method validate_subject_and_object_ranks has a Cognitive Complexity of 29 (exceeds 5 allowed). Consider refactoring.

Open

  def validate_subject_and_object_ranks
    tname = self.type_name

    if tname =~ /TaxonNameRelationship::(Icnp|Icn|Iczn|Icvcn)/ && tname != 'TaxonNameRelationship::Iczn::Validating::UncertainPlacement'
      rank_group = self.subject_taxon_name.rank_class.try(:parent)

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Method nexml_descriptors has a Cognitive Complexity of 29 (exceeds 5 allowed). Consider refactoring.

Open

  def nexml_descriptors(options = {})
    opt = {target: ''}.merge!(options)
    xml = Builder::XmlMarkup.new(target: opt[:target])
    m = opt[:observation_matrix]
    # Multistate characters

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Method generate has a Cognitive Complexity of 29 (exceeds 5 allowed). Consider refactoring.

Open

  def self.generate(otu, project_members, reference_csv = nil)
     name_total = 0
    ::CSV.generate(col_sep: "\t") do |csv|
      csv << %w{
        ID

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Method row_hash_initiate has a Cognitive Complexity of 29 (exceeds 5 allowed). Consider refactoring.

Open

  def row_hash_initiate
    h = {}
    rows = nil # Of either Otu or ObservationMatrixRow of type Otu !! TODO:
    if observation_matrix_id.to_i == 0 && !otu_filter.blank?

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Class TaxonNameClassification has 33 methods (exceeds 20 allowed). Consider refactoring.

Open

class TaxonNameClassification < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::Notes
  include Shared::IsData