Method merge_with has a Cognitive Complexity of 148 (exceeds 5 allowed). Consider refactoring.

Open

  def merge_with(person_id)
    return false if person_id == id
    if r_person = Person.find(person_id) # get the new (merged into self) person
      begin
        ApplicationRecord.transaction do

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Class TaxonName has 126 methods (exceeds 20 allowed). Consider refactoring.

Open

class TaxonName < ApplicationRecord

  has_closure_tree

  include Housekeeping

File taxon_name.rb has 942 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require_dependency Rails.root.to_s + '/app/models/taxon_name_classification.rb'
require_dependency Rails.root.to_s + '/app/models/taxon_name_relationship.rb'

# A taxonomic name (nomenclature only). See also NOMEN.
#

Method build_dwca has a Cognitive Complexity of 113 (exceeds 5 allowed). Consider refactoring.

Open

    def build_dwca
      line_counter = 1 # accounting for headers

      tasks = triage(csv.headers, tasks_)
      csv.each do |row|

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File routes.rb has 859 lines of code (exceeds 250 allowed). Consider refactoring.

Open

Rails.application.eager_load!

TaxonWorks::Application.routes.draw do

  get :ping, controller: 'ping',  defaults: { format: :json }

File geographic_item.rb has 766 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require 'rgeo'

# A GeographicItem is one and only one of [point, line_string, polygon, multi_point, multi_line_string,
# multi_polygon, geometry_collection] which describes a position, path, or area on the globe, generally associated
# with a geographic_area (through a geographic_area_geographic_item entry), and sometimes only with a georeference.

Class GeographicItem has 90 methods (exceeds 20 allowed). Consider refactoring.

Open

class GeographicItem < ApplicationRecord
  include Housekeeping::Users
  include Housekeeping::Timestamps
  include Shared::IsData
  include Shared::SharedAcrossProjects

Method sv_potential_homonyms has a Cognitive Complexity of 84 (exceeds 5 allowed). Consider refactoring.

Open

    def sv_potential_homonyms
      if self.parent && !self.cached_misspelling && !self.name_is_missapplied?
        unless classification_invalid_or_unavailable? || !Protonym.with_taxon_name_relationships_as_subject.with_homonym_or_suppressed.empty? #  self.unavailable_or_invalid?
          if self.id == self.lowest_rank_coordinated_taxon.id
            rank_base = self.rank_class.parent.to_s

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Class CollectingEvent has 77 methods (exceeds 20 allowed). Consider refactoring.

Open

class CollectingEvent < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::DataAttributes
  include Shared::HasRoles

File dwca.rb has 634 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module BatchLoad
  # TODO: Originally transliterated from Import::CollectingEvents: Remove this to-do after successful operation.
  class Import::DWCA < BatchLoad::Import

    attr_accessor :collecting_events

File collecting_event.rb has 628 lines of code (exceeds 250 allowed). Consider refactoring.

Open

class CollectingEvent < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::DataAttributes
  include Shared::HasRoles

File taxon_name_relationship.rb has 592 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require_dependency Rails.root.to_s + '/app/models/taxon_name_classification.rb'  

# A NOMEN https://github.com/SpeciesFileGroup/nomen relationship between two Protonyms.
#
# Unless otherwise noted relationships read left to right, and can be interpreted by inserting "of" after the class name.

File protonym.rb has 557 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require_dependency Rails.root.to_s + '/app/models/taxon_name_relationship.rb'  
#
# Force the loading of TaxonNameRelationships in all worlds.  This allows us to edit without restarting in development.
# Dir[Rails.root.to_s + '/app/models/taxon_name_relationship/**/*.rb'].sort.each {|file| require_dependency file }
#

Method sv_species_gender_agreement has a Cognitive Complexity of 59 (exceeds 5 allowed). Consider refactoring.

Open

    def sv_species_gender_agreement
      if is_species_rank?
        s = part_of_speech_name
        unless part_of_speech_name.nil?
          if %w{adjective participle}.include?(s)

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File bibtex.rb has 512 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require 'citeproc'
require 'csl/styles'

# Bibtex - Subclass of Source that represents most references.
#   Cached values are formatted using the 'zootaxa' style from 'csl/styles'

Class TaxonNameRelationship has 55 methods (exceeds 20 allowed). Consider refactoring.

Open

class TaxonNameRelationship < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::Notes
  include Shared::IsData

File dates.rb has 493 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module Utilities::Dates

  LONG_MONTHS = %w{january february march april may june july august september october november december}.freeze
  SHORT_MONTHS = %w{jan feb mar apr may jun jul aug sep oct nov dec}.freeze
  ROMAN_MONTHS = %i{i ii iii iv v vi vii viii ix x xi xii}.freeze

Function init has 194 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  init: function () {
    var soft_validations = undefined;
    function fillSoftValidation() {
      if (soft_validations == undefined) {
        if ($('[data-global-id]').length) {

File collection_object.rb has 480 lines of code (exceeds 250 allowed). Consider refactoring.

Open

class CollectionObject < ApplicationRecord

  include GlobalID::Identification
  include Housekeeping
  include Shared::Citations

Method build_dwca has 184 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    def build_dwca
      line_counter = 1 # accounting for headers

      tasks = triage(csv.headers, tasks_)
      csv.each do |row|