File csl_styles.rb has 2212 lines of code (exceeds 250 allowed). Consider refactoring.

Open

CSL_STYLES = {
"http://www.zotero.org/styles/vancouver-brackets-only-year-no-issue" => "Vancouver (brackets, only year in date, no issue numbers)",
"http://www.zotero.org/styles/physiologia-plantarum" => "Physiologia Plantarum",
"http://www.zotero.org/styles/orthopedic-clinics-of-north-america" => "Orthopedic Clinics of North America",
"http://www.zotero.org/styles/asa-cssa-sssa" => "American Society of Agronomy, Crop Science Society of America, Soil Science Society of America",

Method useful_descriptors has a Cognitive Complexity of 197 (exceeds 5 allowed). Consider refactoring.

Open

  def useful_descriptors
    list_of_remaining_taxa = {}
    language = language_id.blank? ? nil : language_id.to_i
    row_hash.each do |r_key, r_value|
      if r_value[:status] != 'eliminated'

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File soft_validation_extensions.rb has 1461 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module Protonym::SoftValidationExtensions

  module Klass
    VALIDATIONS = {
      sv_validate_name: {

File dwcTerms.js has 997 lines of code (exceeds 250 allowed). Consider refactoring.

Open

export default [
  {
    name: 'type',
    qualName: 'http://purl.org/dc/terms/type',
    description: 'The nature or genre of the resource. For Darwin Core, recommended best practice is to use the name of the class that defines the root of the record.',

File dates.rb has 797 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module Utilities::Dates

  EARLIEST_DATE = '1700/01/10'.freeze # Reconcile with in-app

  LONG_MONTHS = %w{january february march april may june july august september october november december}.freeze

Method get_otu_contents has a Cognitive Complexity of 85 (exceeds 5 allowed). Consider refactoring.

Open

  def get_otu_contents(options = {})
    opt = {otus: []}.merge!(options)
    m = opt[:observation_matrix]

    otus = Otu.select('otus.*, observation_matrix_rows.id AS row_id').

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Function useGraph has 337 lines of code (exceeds 25 allowed). Consider refactoring.

Open

export function useGraph() {
  const state = reactive(initState())

  const nodes = computed(() =>
    Object.fromEntries(

Method sv_potential_species_homonyms has a Cognitive Complexity of 84 (exceeds 5 allowed). Consider refactoring.

Open

    def sv_potential_species_homonyms
      if persisted? && is_species_rank? && is_available?
        if TaxonNameRelationship.where_subject_is_taxon_name(self).homonym_or_suppressed.empty?
          if self.id == self.lowest_rank_coordinated_taxon.id
            name1 = self.cached_primary_homonym ? self.cached_primary_homonym : nil

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File data.rb has 678 lines of code (exceeds 250 allowed). Consider refactoring.

Open

concern :data_routes do |options|
  collection do
    get 'download'
    get 'list'
    post 'batch_create'

Method date_regex_from_verbatim_label has 266 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  def self.date_regex_from_verbatim_label(text)
    return nil if text.blank?
    text = ' ' + text.downcase.squish + ' '

    date = {}

Method remaining_taxa has a Cognitive Complexity of 67 (exceeds 5 allowed). Consider refactoring.

Open

  def remaining_taxa
    h = {}
    language = language_id.blank? ? nil : language_id.to_i

    row_hash.each do |r_key, r_value|

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Function init has 241 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  init: function () {
    let softValidations

    function fillSoftValidation() {
      if (!softValidations) {

File filter.rb has 567 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module Queries
  module BiologicalAssociation

    class Filter < Query::Filter
      include Queries::Concerns::Notes

Class Filter has 64 methods (exceeds 20 allowed). Consider refactoring.

Open

    class Filter < Query::Filter
      include Queries::Concerns::Notes
      include Queries::Concerns::Tags
      include Queries::Concerns::Citations
      include Queries::Concerns::Depictions

File tasks.rb has 554 lines of code (exceeds 250 allowed). Consider refactoring.

Open

scope :tasks do
  scope :leads do
    scope :hub, controller: 'tasks/leads/hub' do
      get '/', action: :index, as: 'leads_hub_task'
    end

File geo.rb has 533 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module Utilities
  # Special general routines for Geo-specific itams
  module Geo

    # !!

Class TaxonNameRelationship has 60 methods (exceeds 20 allowed). Consider refactoring.

Open

class TaxonNameRelationship < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::Notes
  include Shared::IsData

File taxon_name_relationship.rb has 504 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require_dependency Rails.root.to_s + '/app/models/taxon_name_classification.rb'

# A NOMEN https://github.com/SpeciesFileGroup/nomen relationship between two Protonyms.
#
# Unless otherwise noted relationships read left to right, and can be interpreted by inserting "of" after the class name.

File data.rb has 473 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require 'zip'

module Export::Dwca

  # !!

Method extract_dates has 180 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  def self.extract_dates(trial, match_data)
    end_date_year, end_date_month, end_date_day = 0, 0, 0
    case trial[:method].downcase.to_sym
      when :month_dd_yyyy_2
        start_date_year = 3