Method merge_with has a Cognitive Complexity of 153 (exceeds 5 allowed). Consider refactoring.

Open

  def merge_with(person_id)
    return false if person_id == id
    if r_person = Person.find(person_id) # get the person to merge to this person
      begin
        ApplicationRecord.transaction do

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File soft_validation_extensions.rb has 981 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module Protonym::SoftValidationExtensions

  module Klass

    VALIDATIONS = {

Class TaxonName has 124 methods (exceeds 20 allowed). Consider refactoring.

Open

class TaxonName < ApplicationRecord
  # @return class
  #   this method calls Module#module_parent
  # TODO: This method can be placed elsewhere inside this class (or even removed if not used)
  #       when https://github.com/ClosureTree/closure_tree/issues/346 is fixed.

File taxon_name.rb has 972 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require_dependency Rails.root.to_s + '/app/models/taxon_name_classification.rb'
require_dependency Rails.root.to_s + '/app/models/taxon_name_relationship.rb'

# A taxonomic name (nomenclature only). See also NOMEN.
#

Method build_dwca has a Cognitive Complexity of 113 (exceeds 5 allowed). Consider refactoring.

Open

    def build_dwca
      line_counter = 1 # accounting for headers

      tasks = triage(csv.headers, tasks_)
      csv.each do |row|

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File geographic_item.rb has 768 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require 'rgeo'

# A GeographicItem is one and only one of [point, line_string, polygon, multi_point, multi_line_string,
# multi_polygon, geometry_collection] which describes a position, path, or area on the globe, generally associated
# with a geographic_area (through a geographic_area_geographic_item entry), and sometimes only with a georeference.

Class GeographicItem has 90 methods (exceeds 20 allowed). Consider refactoring.

Open

class GeographicItem < ApplicationRecord
  include Housekeeping::Users
  include Housekeeping::Timestamps
  include Shared::IsData
  include Shared::SharedAcrossProjects

File dates.rb has 728 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module Utilities::Dates

  EARLIEST_DATE = '1700/01/10'.freeze # Reconcile with in-app

  LONG_MONTHS = %w{january february march april may june july august september october november december}.freeze

Method sv_potential_species_homonyms has a Cognitive Complexity of 84 (exceeds 5 allowed). Consider refactoring.

Open

    def sv_potential_species_homonyms
      if persisted? && is_species_rank? && is_available?
        if TaxonNameRelationship.where_subject_is_taxon_name(self).homonym_or_suppressed.empty?
          if self.id == self.lowest_rank_coordinated_taxon.id
            name1 = self.cached_primary_homonym ? self.cached_primary_homonym : nil

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File protonym.rb has 698 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require_dependency Rails.root.to_s + '/app/models/taxon_name_relationship.rb'
#
# Force the loading of TaxonNameRelationships in all worlds.  This allows us to edit without restarting in development.
# Dir[Rails.root.to_s + '/app/models/taxon_name_relationship/**/*.rb'].sort.each {|file| require_dependency file }
#

File collecting_event.rb has 661 lines of code (exceeds 250 allowed). Consider refactoring.

Open

class CollectingEvent < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::DataAttributes
  include Shared::HasRoles

Class CollectingEvent has 79 methods (exceeds 20 allowed). Consider refactoring.

Open

class CollectingEvent < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::DataAttributes
  include Shared::HasRoles

File dwca.rb has 632 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module BatchLoad
  # TODO: Originally transliterated from Import::CollectingEvents: Remove this to-do after successful operation.
  class Import::DWCA < BatchLoad::Import

    attr_accessor :collecting_events

Function init has 234 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  init: function () {
    var soft_validations = undefined;
    function fillSoftValidation() {
      if (soft_validations == undefined) {
        if ($('[data-global-id]').length) {

Method date_regex_from_verbatim_label has 228 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  def self.date_regex_from_verbatim_label(text)
    return nil if text.blank?
    text = ' ' + text.downcase + ' '

    date = {}

File data.rb has 542 lines of code (exceeds 250 allowed). Consider refactoring.

Open

concern :data_routes do |options|
  collection do
    get 'download'
    get 'list'
    post 'batch_create'

File bibtex.rb has 521 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require 'citeproc'
require 'csl/styles'
require 'namecase'

# Bibtex - Subclass of Source that represents most references.

Class Protonym has 57 methods (exceeds 20 allowed). Consider refactoring.

Open

class Protonym < TaxonName

  extend Protonym::SoftValidationExtensions::Klass
  include Protonym::SoftValidationExtensions::Instance
  include Protonym::Becomes

Class TaxonNameRelationship has 56 methods (exceeds 20 allowed). Consider refactoring.

Open

class TaxonNameRelationship < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::Notes
  include Shared::IsData

Method sv_species_gender_agreement has a Cognitive Complexity of 51 (exceeds 5 allowed). Consider refactoring.

Open

    def sv_species_gender_agreement
      if is_species_rank?
        s = part_of_speech_name
        if !s.nil? && is_available?
          if %w{adjective participle}.include?(s)

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