Method merge_with has a Cognitive Complexity of 156 (exceeds 5 allowed). Consider refactoring.

Open

  def merge_with(person_id)
    if r_person = Person.find(person_id) # get the new (merged into self) person
      # r_err         = nil
      begin
        ApplicationRecord.transaction do

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Class TaxonName has 123 methods (exceeds 20 allowed). Consider refactoring.

Open

class TaxonName < ApplicationRecord

  has_closure_tree

  include Housekeeping

Method build_dwca has a Cognitive Complexity of 113 (exceeds 5 allowed). Consider refactoring.

Open

    def build_dwca
      line_counter = 1 # accounting for headers

      tasks = triage(csv.headers, tasks_)
      csv.each do |row|

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File taxon_name.rb has 927 lines of code (exceeds 250 allowed). Consider refactoring.

Open

class TaxonName < ApplicationRecord

  has_closure_tree

  include Housekeeping

File routes.rb has 834 lines of code (exceeds 250 allowed). Consider refactoring.

Open

TaxonWorks::Application.routes.draw do

  get :ping, controller: 'ping',  defaults: { format: :json }
  get :pingz, controller: 'ping',  defaults: { format: :json }

File geographic_item.rb has 749 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require 'rgeo'

# A GeographicItem is one and only one of [point, line_string, polygon, multi_point, multi_line_string,
# multi_polygon, geometry_collection] which describes a position, path, or area on the globe, generally associated
# with a geographic_area (through a geographic_area_geographic_item entry), and sometimes only with a georeference.

Class GeographicItem has 89 methods (exceeds 20 allowed). Consider refactoring.

Open

class GeographicItem < ApplicationRecord
  include Housekeeping::Users
  include Housekeeping::Timestamps
  include Shared::IsData
  include Shared::SharedAcrossProjects

Method sv_potential_homonyms has a Cognitive Complexity of 83 (exceeds 5 allowed). Consider refactoring.

Open

    def sv_potential_homonyms
      if self.parent
        unless classification_invalid_or_unavailable? || !Protonym.with_taxon_name_relationships_as_subject.with_homonym_or_suppressed.empty? #  self.unavailable_or_invalid?
          if self.id == self.lowest_rank_coordinated_taxon.id
            rank_base = self.rank_class.parent.to_s

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File collecting_event.rb has 679 lines of code (exceeds 250 allowed). Consider refactoring.

Open

class CollectingEvent < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::DataAttributes
  include Shared::HasRoles

Class CollectingEvent has 79 methods (exceeds 20 allowed). Consider refactoring.

Open

class CollectingEvent < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::DataAttributes
  include Shared::HasRoles

File dwca.rb has 634 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module BatchLoad
  # TODO: Originally transliterated from Import::CollectingEvents: Remove this to-do after successful operation.
  class Import::DWCA < BatchLoad::Import

    attr_accessor :collecting_events

File protonym.rb has 595 lines of code (exceeds 250 allowed). Consider refactoring.

Open

Dir[Rails.root.to_s + '/app/models/taxon_name_relationship/**/*.rb'].sort.each {|file| require_dependency file }

# A *monomial* TaxonName, a record implies a first usage. This follows Pyle's concept almost exactly.
#
# We inject a lot of relationship helper methods here, in this format.

File taxon_name_relationship.rb has 584 lines of code (exceeds 250 allowed). Consider refactoring.

Open

class TaxonNameRelationship < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::Notes
  include Shared::IsData

Method sv_species_gender_agreement has a Cognitive Complexity of 59 (exceeds 5 allowed). Consider refactoring.

Open

    def sv_species_gender_agreement
      if is_species_rank?
        s = part_of_speech_name
        unless part_of_speech_name.nil?
          if %w{adjective participle}.include?(s)

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File bibtex.rb has 501 lines of code (exceeds 250 allowed). Consider refactoring.

Open

require 'citeproc'
require 'csl/styles'

# Bibtex - Subclass of Source that represents most references.
#   Cached values are formatted using the 'zootaxa' style from 'csl/styles'

File dates.rb has 493 lines of code (exceeds 250 allowed). Consider refactoring.

Open

module Utilities::Dates

  LONG_MONTHS = %w{january february march april may june july august september october november december}.freeze
  SHORT_MONTHS = %w{jan feb mar apr may jun jul aug sep oct nov dec}.freeze
  ROMAN_MONTHS = %i{i ii iii iv v vi vii viii ix x xi xii}.freeze

Function init has 194 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  init: function () {
    var soft_validations = undefined;
    function fillSoftValidation() {
      if (soft_validations == undefined) {
        if ($('[data-global-id]').length) {

Class TaxonNameRelationship has 54 methods (exceeds 20 allowed). Consider refactoring.

Open

class TaxonNameRelationship < ApplicationRecord
  include Housekeeping
  include Shared::Citations
  include Shared::Notes
  include Shared::IsData

File collection_object.rb has 478 lines of code (exceeds 250 allowed). Consider refactoring.

Open

class CollectionObject < ApplicationRecord

  include GlobalID::Identification
  include Housekeeping
  include Shared::Citations

Method get_original_combination has a Cognitive Complexity of 48 (exceeds 5 allowed). Consider refactoring.

Open

  def get_original_combination
    # strategy is to get the original hash, and swap in values for pertinent relationships
    str = nil

    if is_genus_or_species_rank?

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