Avoid deeply nested control flow statements.

Open

                        for i in range(len(self._alpha_sis_basic[k])):
                            newalpha += [
                                _ + self._alpha_sis_basic[k][i] for _ in alpha
                            ]
                        alpha = newalpha

Avoid deeply nested control flow statements.

Open

                        if (
                            i == 0
                            and i + 1 < elen
                            and ename[i + 2 : i + 3] not in self._uc_v_set
                        ):

Avoid deeply nested control flow statements.

Open

                        if not (col_covered[col] | row_covered[row]):
                            break
                    else:

Function __init__ has 6 arguments (exceeds 4 allowed). Consider refactoring.

Open

    def __init__(

Avoid deeply nested control flow statements.

Open

                        if not any(
                            abbr in fname for abbr in ('i.', 'v.', 'x.')
                        ):
                            full_name = full_name[:loc]
                            toolcode[7] += '{:03d}'.format(num) + 'a'

Avoid deeply nested control flow statements.

Open

                        for key, value in tar_feat[i].items():
                            if key != 'supplemental':
                                tar_feat[j][key] = value
                        j = 0

Avoid deeply nested control flow statements.

Open

                        for key, value in src_feat[i].items():
                            if key != 'supplemental':
                                src_feat[j][key] = value
                        j = 0

Function corr has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    def corr(self, src: str, tar: str) -> float:
        """Return the Hurlbert correlation of two strings.

        Parameters
        ----------

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Function sim_matrix has 6 arguments (exceeds 4 allowed). Consider refactoring.

Open

    def sim_matrix(

Avoid deeply nested control flow statements.

Open

                        for row in range(n):
                            if (
                                not (row_covered[row])
                                and arr[row, col] < h_val
                            ):

Avoid deeply nested control flow statements.

Open

                        if backtrace:
                            trace_mat[i + 1, j + 1] = 2
        if backtrace:

Avoid deeply nested control flow statements.

Open

                        if (
                            abs(sp - tp) <= self._max_dist
                            and sp not in src_matched
                            and tp not in tar_matched
                        ):

Avoid deeply nested control flow statements.

Open

                        if not (col_covered[col] | row_covered[row]):
                            primed[row, col] = True
                            z_cols = (starred[row, :]).nonzero()[0]
                            if not z_cols.size:
                                step = 2

Avoid deeply nested control flow statements.

Open

                        if i == src_len or j == tar_len:
                            sg_max = s_mat[i, j]
                    else:

Avoid deeply nested control flow statements.

Open

                        if roman:
                            if not any(
                                abbr in fname for abbr in ('i.', 'v.', 'x.')
                            ):
                                full_name = (

Function sim has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    def sim(self, src: str, tar: str) -> float:
        """Return the BI-SIM similarity of two strings.

        Parameters
        ----------

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Function decode has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    def decode(self, text: str) -> str:
        r"""Perform decoding of run-length-encoding (RLE).

        Parameters
        ----------

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  Read up

Function sim_score has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    def sim_score(self, src: str, tar: str) -> float:
        """Return the Morisita similarity of two strings.

        Parameters
        ----------

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  Read up

Function __init__ has 6 arguments (exceeds 4 allowed). Consider refactoring.

Open

    def __init__(

Avoid deeply nested control flow statements.

Open

                        if backtrace:
                            trace_mat[i + 1, j + 1] = 2