Function readGraphStructure has a Cognitive Complexity of 178 (exceeds 5 allowed). Consider refactoring.

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function readGraphStructure(){
    //First: load data
    if (file) {
        var fr = new FileReader();
        var fileData = new Blob([file]);            //TODO Don't load the whole file into memory at once!

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Function readGraphStructure has 244 lines of code (exceeds 25 allowed). Consider refactoring.

Open

function readGraphStructure(){
    //First: load data
    if (file) {
        var fr = new FileReader();
        var fileData = new Blob([file]);            //TODO Don't load the whole file into memory at once!

Function onload has 237 lines of code (exceeds 25 allowed). Consider refactoring.

Open

        fr.onload = function () {
            var arrayBuffer = fr.result;
            var bytes = new Uint8Array(arrayBuffer);
            //console.log(bytes);

File samediff-ui.js has 332 lines of code (exceeds 250 allowed). Consider refactoring.

Open

/*
 *  ******************************************************************************
 *  *
 *  *
 *  * This program and the accompanying materials are made available under the

Avoid deeply nested control flow statements.

Open

                        for (var j = 0; j < cdLength; j++) {
                            var varName = o.controlDeps(j);
                            //If placeholder, variable or constant, make edge from variable node
                            //If array, make edge from op node

Avoid deeply nested control flow statements.

Open

                        if (extraLabel != null && extraLabel !== "") {
                            n = n + "\n" + extraLabel;
                        }

Avoid deeply nested control flow statements.

Open

                        if (v.inputsForOpLength() > 0) {
                            for (var j = 0; j < v.inputsForOpLength(); j++) {
                                var opName = v.inputsForOp(j);
                                opName = idEscapeSlashes(opName);
                                var edgeObj = {

Avoid deeply nested control flow statements.

Open

                        if (vcdCount > 0) {
                            for (var j = 0; j < vcdCount; j++) {
                                var vcd = v.controlDeps(j);

                                //2 possibilities: variable is a variable/constant/placeholder: source is from variable node

Avoid deeply nested control flow statements.

Open

                        if (vType === nd4j.graph.VarType.VARIABLE) {
                            renderStyle = "uivariable variable";
                        } else if (vType === nd4j.graph.VarType.PLACEHOLDER) {
                            renderStyle = "uivariable placeholder";
                        } else if (vType === nd4j.graph.VarType.CONSTANT) {

Avoid deeply nested control flow statements.

Open

                        if (vType === nd4j.graph.VarType.CONSTANT) {
                            var constArr = v.constantValue();
                            if (constArr != null) {
                                if (constArr.shapeLength() === 0 && constArr.bufferLength() > 0) {
                                    var scalar = scalarFromFlatArray(constArr);

Avoid deeply nested control flow statements.

Open

                        for (var j = 0; j < ol; j++) {
                            var outVarName = o.outputs(j);
                            var outVar = sdGraphVariableMap.get(outVarName);
                            var outVarInputCount = outVar.inputsForOpLength();

Identical blocks of code found in 3 locations. Consider refactoring.

Open

                            if (vType === nd4j.graph.VarType.CONSTANT || vType === nd4j.graph.VarType.PLACEHOLDER || vType === nd4j.graph.VarType.VARIABLE) {
                                edgeObj = {
                                    source: "var-" + varName,
                                    target: id,
                                    label: ""

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Identical blocks of code found in 3 locations. Consider refactoring.

Open

                    if (vType === nd4j.graph.VarType.CONSTANT || vType === nd4j.graph.VarType.PLACEHOLDER || vType === nd4j.graph.VarType.VARIABLE) {
                        var dt = dataTypeToString(v.datatype());
                        var shape = varShapeToString(v);
                        var n = "\"" + name + "\"\n" + varTypeToString(vType) + "\n" + dt + " " + shape;

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