Consider simplifying this complex logical expression.

Open

                        if ( forward && useCache ) {

                            // Seek `elem` from a previously-cached index

                            // ...in a gzip-friendly way

Function deepEq has 66 lines of code (exceeds 25 allowed). Consider refactoring.

Open

  function deepEq(a, b, aStack, bStack) {
    // Unwrap any wrapped objects.
    if (a instanceof _$1) a = a._wrapped;
    if (b instanceof _$1) b = b._wrapped;
    // Compare `[[Class]]` names.

Function __init__ has 21 arguments (exceeds 4 allowed). Consider refactoring.

Open

    def __init__(

Function superMatcher has 65 lines of code (exceeds 25 allowed). Consider refactoring.

Open

        superMatcher = function( seed, context, xml, results, outermost ) {
            var elem, j, matcher,
                matchedCount = 0,
                i = "0",
                unmatched = seed && [],

Function supervised_tagging has a Cognitive Complexity of 19 (exceeds 5 allowed). Consider refactoring.

Open

def supervised_tagging(
    coord_object: coordinates,
    raw_coords: table_dict,
    coords: table_dict,
    dists: table_dict,

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Function plot_enrichment has 20 arguments (exceeds 4 allowed). Consider refactoring.

Open

def plot_enrichment(

Function performObjectSearch has a Cognitive Complexity of 18 (exceeds 5 allowed). Consider refactoring.

Open

  performObjectSearch: (object, objectTerms) => {
    const filenames = Search._index.filenames;
    const docNames = Search._index.docnames;
    const objects = Search._index.objects;
    const objNames = Search._index.objnames;

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Function get_training_set has a Cognitive Complexity of 18 (exceeds 5 allowed). Consider refactoring.

Open

    def get_training_set(
        self, current_table_dict: table_dict, test_videos: int = 0
    ) -> tuple:
        """Generate training and test sets as numpy.array objects for model training.

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Function get_areas has a Cognitive Complexity of 18 (exceeds 5 allowed). Consider refactoring.

Open

    def get_areas(self, speed: int = 0, selected_id: str = "all") -> table_dict:
        """Return a table_dict object with all relevant areas (head, torso, back, full). Unless specified otherwise, the areas are computed for all animals.

        Args:
            speed (int): The derivative to use for speed.

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Function plot_enrichment has a Cognitive Complexity of 18 (exceeds 5 allowed). Consider refactoring.

Open

def plot_enrichment(
    coordinates: coordinates,
    embeddings: table_dict = None,
    soft_counts: table_dict = None,
    breaks: table_dict = None,

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Function _process_animation_data has a Cognitive Complexity of 18 (exceeds 5 allowed). Consider refactoring.

Open

def _process_animation_data(
    coordinates,
    experiment_id,
    animal_id,
    center,

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Function domManip has 60 lines of code (exceeds 25 allowed). Consider refactoring.

Open

function domManip( collection, args, callback, ignored ) {

    // Flatten any nested arrays
    args = flat( args );

Function ajaxConvert has 59 lines of code (exceeds 25 allowed). Consider refactoring.

Open

function ajaxConvert( s, response, jqXHR, isSuccess ) {
    var conv2, current, conv, tmp, prev,
        converters = {},

        // Work with a copy of dataTypes in case we need to modify it for conversion

Function highlightText has a Cognitive Complexity of 17 (exceeds 5 allowed). Consider refactoring.

Open

jQuery.fn.highlightText = function(text, className) {
    function highlight(node, addItems) {
        if (node.nodeType === 3) {
            var val = node.nodeValue;
            var pos = val.toLowerCase().indexOf(text);

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Function set_up_project_directory has a Cognitive Complexity of 17 (exceeds 5 allowed). Consider refactoring.

Open

    def set_up_project_directory(self, debug=False):
        """Create a project directory where to save all produced results."""
        # Create a project directory, as well as subfolders for videos and tables
        project_path = os.path.join(self.project_path, self.project_name)

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Function init has 54 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    init = jQuery.fn.init = function( selector, context, root ) {
        var match, elem;

        // HANDLE: $(""), $(null), $(undefined), $(false)
        if ( !selector ) {

Function plot_heatmaps has 17 arguments (exceeds 4 allowed). Consider refactoring.

Open

def plot_heatmaps(

Function supervised_annotation has a Cognitive Complexity of 16 (exceeds 5 allowed). Consider refactoring.

Open

    def supervised_annotation(
        self,
        params: Dict = {},
        center: str = "Center",
        align: str = "Spine_1",

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Function load_table has a Cognitive Complexity of 16 (exceeds 5 allowed). Consider refactoring.

Open

def load_table(
    tab: str,
    table_path: str,
    table_format: str,
    rename_bodyparts: list = None,

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Function remove has 52 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    remove: function( elem, types, handler, selector, mappedTypes ) {

        var j, origCount, tmp,
            events, t, handleObj,
            special, handlers, type, namespaces, origType,