Avoid deeply nested control flow statements.

Open

                        for(int k = j + 1; k < properChildrenSize; k ++)
                            if(!SetHelper.intersection(childrenGroup.get(properChildren.get(j)), childrenGroup.get(properChildren.get(k))).isEmpty())
                                //TODO
                                throw new IllegalStateException("Children are not disjointed, please report this case to the developer, thank you");

Method emitArc has 6 arguments (exceeds 4 allowed). Consider refactoring.

Open

    private static int emitArc(final ByteBuffer bb, final OutputStream os, final int gtl, int flags, final byte label, final int targetOffset)

Method enforceNextCompoundCase has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    private static String enforceNextCompoundCase(final char lastChar, String nextCompound, final StringHelper.Casing lastWordCasing,
            final StringHelper.Casing nextWordCasing){
        final char nextChar = nextCompound.charAt(0);
        if(Character.isLetter(lastChar) && Character.isLetter(nextChar)){
            final Set<StringHelper.Casing> collisions = COMPOUND_WORD_BOUNDARY_COLLISIONS.get(lastWordCasing);

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Method emitNodes has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    private int emitNodes(final FSAAbstract fsa, final OutputStream os, final DynamicIntArray linearized) throws IOException{
        int offset = 0;

        //add epsilon state
        offset += emitNodeData(os, 0);

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Avoid deeply nested control flow statements.

Open

                        for(int m = 0; m < size; m ++){
                            final Inflection inflection = inflections.get(m);
                            if(inflection.hasContinuationFlag(flag))
                                dicEntriesPerFlag.add(inflection);
                        }

Avoid deeply nested control flow statements.

Open

                        if(restart)
                            continue;

Method getTableCellRendererComponent has 6 arguments (exceeds 4 allowed). Consider refactoring.

Open

    public final Component getTableCellRendererComponent(final JTable table, final Object value, final boolean isSelected,
            final boolean hasFocus, final int row, final int column){

Method next has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    @Override
    public final WordData next(){
        final ByteBuffer entryBuffer = entriesItr.next();
        final byte[] array = entryBuffer.array();
        final int limit = entryBuffer.remaining();

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Method hyphenate has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    @Override
    public final Hyphenation hyphenate(final String word){
        //apply first level hyphenation
        final Map<HyphenationParser.Level, AhoCorasickTrie<String>> patterns = hypParser.getPatterns();
        HyphenationOptions options = hypParser.getOptions().getNonCompoundOptions();

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Method serialize has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    @Override
    public final <T extends OutputStream> T serialize(final FSAAbstract fsa, final T os, final ProgressCallback progressCallback)
            throws IOException{
        //calculate the most frequent labels and build indexed labels dictionary
        computeLabelsIndex(fsa);

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Avoid deeply nested control flow statements.

Open

                        for(int j = 1; !restart && j < branchSize; j ++){
                            final LineEntry child = branch.get(j);
                            if(!parent.from.containsAll(child.from))
                                //TODO
                                throw new IllegalStateException("No proper children found, please report this case to the developer, thank you");

Avoid deeply nested control flow statements.

Open

                        if(inflections.size() > limit)
                            break;

Method enforceNoHyphens has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    public final void enforceNoHyphens(final List<String> syllabes, final Iterable<String> noHyphen){
        if(syllabes.size() > 1){
            int wordLength = 0;
            for(int i = 0; i < syllabes.size(); i ++)
                wordLength += syllabes.get(i).length();

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Avoid deeply nested control flow statements.

Open

                            for(final AffixEntry candidateAppliedRule : candidate.getInflection().getAppliedRules())
                                candidateAppliedRules.remove(candidateAppliedRule.getFlag());

Method maxRepeating has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    public static int maxRepeating(final CharSequence text, final char chr){
        final int n = text.length();
        int count = 0;
        int currentCount = 1;
        //traverse string except last character

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Method splitAndSortFiles has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    @SuppressWarnings("OverlyBroadThrowsClause")
    private static List<File> splitAndSortFiles(final File file, final ExternalSorterOptions options) throws IOException{
        //extract uncompressed file size
        final long dataLength = FileHelper.getFileSize(file);
        final long availableMemory = JavaHelper.estimateAvailableMemory();

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Method notifyListeners has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    private void notifyListeners(final WatchKey key){
        final List<WatchEvent<?>> pollEvents = key.pollEvents();
        for(final WatchEvent<?> event : pollEvents){
            final WatchEvent.Kind<?> eventKind = event.kind();

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Avoid deeply nested control flow statements.

Open

                            for(final AffixEntry otherAppliedRule : other.getInflection().getAppliedRules())
                                otherAppliedRules.remove(otherAppliedRule.getFlag());

Avoid deeply nested control flow statements.

Open

                            if(candidateAppliedRules.isEmpty()){
                                final String info = candidate.getWord()
                                    + (equalProduction && ! other.getWord().equals(candidate.getWord())? " (or " + other.getWord() + ")": "")
                                    + " is a candidate for removal";
                                if(!sj.toString().endsWith(info))

Method append has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.

Open

    @Override
    protected final void append(final ILoggingEvent eventObject){
        if((!TEXT_AREAS.isEmpty() || !TEXT_PANES.isEmpty() || !LABELS.isEmpty()) && encoder != null){
            final Level level = eventObject.getLevel();
            if(level == Level.WARN && !preferences.getBoolean(ReportWarningsAction.REPORT_WARNINGS, true))

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