sanger/limber

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style: rubocop #3176
Stephen Hulme authored 362958ca
complete00:00:20
1
git clone
2
codeclimate validate-config
View output
codeclimate validate-config
No errors or warnings found in .codeclimate.json.
3
codeclimate prepare
View output
codeclimate prepare
4
builder pull-engines
View output
determining required images
5
structure
View output
12
Parser process id: 12
codeclimate-parser socket not present
waiting 1s...
W, [2024-09-20T09:22:38.258336 #1]  WARN -- : Skipping app/frontend/javascript/shared/transfersLayouts.js due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:38.258378 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:38.604920 #1]  WARN -- : Skipping app/frontend/javascript/multi-stamp/components/MultiStampLibrarySplitter.js due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:38.604958 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:39.496963 #1]  WARN -- : Skipping app/models/ongoing_tube.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:39.497009 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:39.539969 #1]  WARN -- : Skipping app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:39.540002 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:39.580014 #1]  WARN -- : Skipping app/models/concerns/presenters/creation_behaviour.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:39.580042 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:39.587580 #1]  WARN -- : Skipping app/models/concerns/presenters/extended_csv.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:39.587608 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:39.644599 #1]  WARN -- : Skipping app/models/concerns/labware_creators/tagged_plate_behaviour.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:39.644625 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:39.675978 #1]  WARN -- : Skipping app/models/ongoing_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:39.676004 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:39.759488 #1]  WARN -- : Skipping app/models/utility/pcr_cycles_csv_file_upload_config_base.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:39.759513 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:39.920661 #1]  WARN -- : Skipping app/models/presenters/plate_presenter.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:39.920686 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:39.986097 #1]  WARN -- : Skipping app/models/labels/tube_label.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:39.986121 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.026282 #1]  WARN -- : Skipping app/models/labels/tube_label_traction_compatible.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.026306 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.088618 #1]  WARN -- : Skipping app/models/state_changers.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.088642 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.108738 #1]  WARN -- : Skipping app/models/robots/bed/plate_to_tube_racks_bed.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.108763 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.241320 #1]  WARN -- : Skipping app/models/labware_metadata.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.241346 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.252732 #1]  WARN -- : Skipping app/models/print_job.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.252756 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.319496 #1]  WARN -- : Skipping app/models/limber/qc_file.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.319521 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.362039 #1]  WARN -- : Skipping app/models/sequencescape_submission.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.362064 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.420522 #1]  WARN -- : Skipping app/models/labware_creators/final_tube.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.420546 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.627857 #1]  WARN -- : Skipping app/models/labware_creators/tagged_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.627886 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.678427 #1]  WARN -- : Skipping app/models/labware_creators/quadrant_split_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.678453 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.687997 #1]  WARN -- : Skipping app/models/labware_creators/pooled_tubes_by_submission_with_phi_x.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.688021 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.735156 #1]  WARN -- : Skipping app/models/labware_creators/multi_stamp_tubes.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.735180 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.743795 #1]  WARN -- : Skipping app/models/labware_creators/base.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.743819 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.749867 #1]  WARN -- : Skipping app/models/labware_creators/pooled_tubes_base.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.749891 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.759959 #1]  WARN -- : Skipping app/models/labware_creators/multi_plate_pool.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.759984 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.765241 #1]  WARN -- : Skipping app/models/labware_creators/custom_tagged_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.765267 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.835567 #1]  WARN -- : Skipping app/models/labware_creators/plate_split_to_tube_racks.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.835592 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.905018 #1]  WARN -- : Skipping app/models/labware_creators/quadrant_stamp_base.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.905043 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.908755 #1]  WARN -- : Skipping app/models/labware_creators/pooled_tubes_by_sample.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.908779 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.941070 #1]  WARN -- : Skipping app/models/labware_creators/final_tube_from_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.941095 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:40.998148 #1]  WARN -- : Skipping app/helpers/page_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:40.998172 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.001458 #1]  WARN -- : Skipping app/helpers/plate_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.001483 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.003068 #1]  WARN -- : Skipping app/helpers/labware_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.003093 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.005700 #1]  WARN -- : Skipping app/helpers/application_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.005724 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.028261 #1]  WARN -- : Skipping app/helpers/barcode_labels_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.028286 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.030799 #1]  WARN -- : Skipping app/controllers/qc_files_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.030821 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.050612 #1]  WARN -- : Skipping app/controllers/concerns/work_completion_behaviour.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.050637 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.053142 #1]  WARN -- : Skipping app/controllers/concerns/sequencescape_submission_behaviour.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.053167 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.069742 #1]  WARN -- : Skipping app/controllers/pipeline_work_in_progress_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.069767 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.075886 #1]  WARN -- : Skipping app/controllers/search_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.075911 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.133380 #1]  WARN -- : Skipping app/controllers/labware_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.133405 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.171537 #1]  WARN -- : Skipping app/controllers/robots_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.171561 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.179826 #1]  WARN -- : Skipping app/sequencescape/sequencescape/api/v2.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.179852 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.308654 #1]  WARN -- : Skipping app/sequencescape/sequencescape/api/v2/shared/has_requests.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.308679 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.426031 #1]  WARN -- : Skipping lib/well_helpers.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.426057 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.444099 #1]  WARN -- : Skipping lib/robot_configuration.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.444142 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:41.453349 #1]  WARN -- : Skipping lib/purpose_config.rb due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:41.453374 #1]  WARN -- : Response status: 422
6
duplication
View output
12
Parser process id: 12
codeclimate-parser socket not present
waiting 1s...
W, [2024-09-20T09:22:44.677535 #1]  WARN -- : Skipping app/frontend/javascript/shared/transfersLayouts.js due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:44.677565 #1]  WARN -- : Response status: 422
W, [2024-09-20T09:22:45.168556 #1]  WARN -- : Skipping app/frontend/javascript/multi-stamp/components/MultiStampLibrarySplitter.js due to CC::Parser::Client::HTTPError
W, [2024-09-20T09:22:45.168757 #1]  WARN -- : Response status: 422
I, [2024-09-20T09:22:45.469732 #1]  INFO -- : Skipping file ./app/models/ongoing_tube.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :states))

I, [2024-09-20T09:22:45.498493 #1]  INFO -- : Skipping file ./app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb due to exception (Racc::ParseError): ./app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb:8 :: parse error on value ")" (tRPAREN)

I, [2024-09-20T09:22:45.534379 #1]  INFO -- : Skipping file ./app/models/concerns/presenters/creation_behaviour.rb due to exception (Racc::ParseError): ./app/models/concerns/presenters/creation_behaviour.rb:30 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:45.541820 #1]  INFO -- : Skipping file ./app/models/concerns/presenters/extended_csv.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:lvar, :index))

I, [2024-09-20T09:22:45.587319 #1]  INFO -- : Skipping file ./app/models/concerns/labware_creators/tagged_plate_behaviour.rb due to exception (Racc::ParseError): ./app/models/concerns/labware_creators/tagged_plate_behaviour.rb:11 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:45.605729 #1]  INFO -- : Skipping file ./app/models/ongoing_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :states))

I, [2024-09-20T09:22:45.672622 #1]  INFO -- : Skipping file ./app/models/utility/pcr_cycles_csv_file_upload_config_base.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :input_amount_desired_min))

I, [2024-09-20T09:22:45.768169 #1]  INFO -- : Skipping file ./app/models/presenters/plate_presenter.rb due to exception (Racc::ParseError): ./app/models/presenters/plate_presenter.rb:39 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:45.809705 #1]  INFO -- : Skipping file ./app/models/labels/tube_label.rb due to exception (Racc::ParseError): ./app/models/labels/tube_label.rb:9 :: parse error on value ":" (tSYMBEG)

I, [2024-09-20T09:22:45.825525 #1]  INFO -- : Skipping file ./app/models/labels/tube_label_traction_compatible.rb due to exception (Racc::ParseError): ./app/models/labels/tube_label_traction_compatible.rb:30 :: parse error on value ":" (tSYMBEG)

I, [2024-09-20T09:22:45.871779 #1]  INFO -- : Skipping file ./app/models/state_changers.rb due to exception (Racc::ParseError): ./app/models/state_changers.rb:28 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:45.889206 #1]  INFO -- : Skipping file ./app/models/robots/bed/plate_to_tube_racks_bed.rb due to exception (Racc::ParseError): ./app/models/robots/bed/plate_to_tube_racks_bed.rb:21 :: parse error on value "," (tCOMMA)

I, [2024-09-20T09:22:45.963052 #1]  INFO -- : Skipping file ./app/models/labware_metadata.rb due to exception (Racc::ParseError): ./app/models/labware_metadata.rb:8 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:45.967495 #1]  INFO -- : Skipping file ./app/models/print_job.rb due to exception (Racc::ParseError): ./app/models/print_job.rb:10 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.007892 #1]  INFO -- : Skipping file ./app/models/limber/qc_file.rb due to exception (Racc::ParseError): ./app/models/limber/qc_file.rb:7 :: parse error on value ":" (tSYMBEG)

I, [2024-09-20T09:22:46.070994 #1]  INFO -- : Skipping file ./app/models/sequencescape_submission.rb due to exception (Racc::ParseError): ./app/models/sequencescape_submission.rb:39 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.106323 #1]  INFO -- : Skipping file ./app/models/labware_creators/final_tube.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :parents))

I, [2024-09-20T09:22:46.151293 #1]  INFO -- : Skipping file ./app/models/labware_creators/pcr_cycles_binned_plate/csv_file_base.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pcr_cycles_binned_plate/csv_file_base.rb:18 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.251444 #1]  INFO -- : Skipping file ./app/models/labware_creators/tagged_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :tag_plate))

I, [2024-09-20T09:22:46.296794 #1]  INFO -- : Skipping file ./app/models/labware_creators/quadrant_split_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :uuid))

I, [2024-09-20T09:22:46.302080 #1]  INFO -- : Skipping file ./app/models/labware_creators/pooled_tubes_by_submission_with_phi_x.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pooled_tubes_by_submission_with_phi_x.rb:21 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.401078 #1]  INFO -- : Skipping file ./app/models/labware_creators/multi_stamp_tubes.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :transfers))

I, [2024-09-20T09:22:46.406684 #1]  INFO -- : Skipping file ./app/models/labware_creators/base.rb due to exception (Racc::ParseError): ./app/models/labware_creators/base.rb:21 :: parse error on value "%i[" (error)

I, [2024-09-20T09:22:46.428790 #1]  INFO -- : Skipping file ./app/models/labware_creators/pooled_tubes_base.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pooled_tubes_base.rb:26 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.433405 #1]  INFO -- : Skipping file ./app/models/labware_creators/multi_plate_pool.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :transfers))

I, [2024-09-20T09:22:46.481290 #1]  INFO -- : Skipping file ./app/models/labware_creators/custom_tagged_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :tag_plate))

I, [2024-09-20T09:22:46.567947 #1]  INFO -- : Skipping file ./app/models/labware_creators/plate_split_to_tube_racks.rb due to exception (Racc::ParseError): ./app/models/labware_creators/plate_split_to_tube_racks.rb:48 :: parse error on value "%i[" (error)

I, [2024-09-20T09:22:46.595637 #1]  INFO -- : Skipping file ./app/models/labware_creators/custom_pooled_tubes/csv_file.rb due to exception (Racc::ParseError): ./app/models/labware_creators/custom_pooled_tubes/csv_file.rb:12 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.619907 #1]  INFO -- : Skipping file ./app/models/labware_creators/quadrant_stamp_base.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :transfers))

I, [2024-09-20T09:22:46.629221 #1]  INFO -- : Skipping file ./app/models/labware_creators/pooled_tubes_by_sample.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pooled_tubes_by_sample.rb:20 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.668821 #1]  INFO -- : Skipping file ./app/models/labware_creators/final_tube_from_plate.rb due to exception (Racc::ParseError): ./app/models/labware_creators/final_tube_from_plate.rb:44 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.668859 #1]  INFO -- : Skipping file ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack.rb due to exception (Racc::ParseError): ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack.rb:54 :: parse error on value "]" (tRBRACK)

I, [2024-09-20T09:22:46.693800 #1]  INFO -- : Skipping file ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack_with_rack_barcode.rb due to exception (Racc::ParseError): ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack_with_rack_barcode.rb:31 :: parse error on value "]" (tRBRACK)

I, [2024-09-20T09:22:46.706761 #1]  INFO -- : Skipping file ./app/helpers/page_helper.rb due to exception (Racc::ParseError): ./app/helpers/page_helper.rb:5 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.717605 #1]  INFO -- : Skipping file ./app/helpers/plate_helper.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:lvar, :pool_id))

I, [2024-09-20T09:22:46.728167 #1]  INFO -- : Skipping file ./app/helpers/labware_helper.rb due to exception (Racc::ParseError): ./app/helpers/labware_helper.rb:5 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.735472 #1]  INFO -- : Skipping file ./app/helpers/application_helper.rb due to exception (Racc::ParseError): ./app/helpers/application_helper.rb:30 :: parse error on value ")" (tRPAREN)

I, [2024-09-20T09:22:46.765731 #1]  INFO -- : Skipping file ./app/helpers/barcode_labels_helper.rb due to exception (Racc::ParseError): ./app/helpers/barcode_labels_helper.rb:5 :: parse error on value ":" (tSYMBEG)

I, [2024-09-20T09:22:46.766494 #1]  INFO -- : Skipping file ./app/controllers/qc_files_controller.rb due to exception (Racc::ParseError): ./app/controllers/qc_files_controller.rb:11 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.804068 #1]  INFO -- : Skipping file ./app/controllers/concerns/work_completion_behaviour.rb due to exception (Racc::ParseError): ./app/controllers/concerns/work_completion_behaviour.rb:20 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.809627 #1]  INFO -- : Skipping file ./app/controllers/concerns/sequencescape_submission_behaviour.rb due to exception (Racc::ParseError): ./app/controllers/concerns/sequencescape_submission_behaviour.rb:23 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.885718 #1]  INFO -- : Skipping file ./app/controllers/pipeline_work_in_progress_controller.rb due to exception (Racc::ParseError): ./app/controllers/pipeline_work_in_progress_controller.rb:20 :: parse error on value "&." (error)

I, [2024-09-20T09:22:46.897167 #1]  INFO -- : Skipping file ./app/controllers/search_controller.rb due to exception (Racc::ParseError): ./app/controllers/search_controller.rb:8 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.973559 #1]  INFO -- : Skipping file ./app/controllers/labware_controller.rb due to exception (Racc::ParseError): ./app/controllers/labware_controller.rb:11 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:46.994100 #1]  INFO -- : Skipping file ./app/controllers/robots_controller.rb due to exception (Racc::ParseError): ./app/controllers/robots_controller.rb:14 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:47.017369 #1]  INFO -- : Skipping file ./app/sequencescape/sequencescape/api/v2.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :child_plates))

I, [2024-09-20T09:22:47.084750 #1]  INFO -- : Skipping file ./app/sequencescape/sequencescape/api/v2/shared/has_requests.rb due to exception (Racc::ParseError): ./app/sequencescape/sequencescape/api/v2/shared/has_requests.rb:44 :: parse error on value "&." (error)

I, [2024-09-20T09:22:47.163541 #1]  INFO -- : Skipping file ./lib/well_helpers.rb due to exception (Racc::ParseError): ./lib/well_helpers.rb:9 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:47.180078 #1]  INFO -- : Skipping file ./lib/robot_configuration.rb due to exception (Racc::ParseError): ./lib/robot_configuration.rb:9 :: parse error on value ":" (tCOLON)

I, [2024-09-20T09:22:47.199621 #1]  INFO -- : Skipping file ./lib/purpose_config.rb due to exception (Racc::ParseError): ./lib/purpose_config.rb:47 :: parse error on value ":" (tSYMBEG)