sanger/limber

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style: prettier #3248
Stephen Hulme authored c43edf83
complete00:00:28
1
git clone
2
codeclimate validate-config
View output
codeclimate validate-config
No errors or warnings found in .codeclimate.json.
3
codeclimate prepare
View output
codeclimate prepare
4
builder pull-engines
View output
determining required images
5
structure
View output
12
Parser process id: 12
codeclimate-parser socket not present
waiting 1s...
W, [2024-09-25T13:30:08.279068 #1]  WARN -- : Skipping app/frontend/javascript/shared/transfersLayouts.js due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:08.279109 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:08.864333 #1]  WARN -- : Skipping app/frontend/javascript/multi-stamp/components/MultiStampLibrarySplitter.js due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:08.864371 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:10.323532 #1]  WARN -- : Skipping app/models/ongoing_tube.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:10.323855 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:10.392222 #1]  WARN -- : Skipping app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:10.392269 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:10.461566 #1]  WARN -- : Skipping app/models/concerns/presenters/creation_behaviour.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:10.461606 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:10.474069 #1]  WARN -- : Skipping app/models/concerns/presenters/extended_csv.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:10.474111 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:10.574902 #1]  WARN -- : Skipping app/models/concerns/labware_creators/tagged_plate_behaviour.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:10.575069 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:10.631964 #1]  WARN -- : Skipping app/models/ongoing_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:10.632017 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:10.776918 #1]  WARN -- : Skipping app/models/utility/pcr_cycles_csv_file_upload_config_base.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:10.776973 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:11.061971 #1]  WARN -- : Skipping app/models/presenters/plate_presenter.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:11.062021 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:11.184571 #1]  WARN -- : Skipping app/models/labels/tube_label.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:11.184619 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:11.267364 #1]  WARN -- : Skipping app/models/labels/tube_label_traction_compatible.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:11.267415 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:11.402271 #1]  WARN -- : Skipping app/models/state_changers.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:11.402387 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:11.446896 #1]  WARN -- : Skipping app/models/robots/bed/plate_to_tube_racks_bed.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:11.446941 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:11.659796 #1]  WARN -- : Skipping app/models/labware_metadata.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:11.659836 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:11.683727 #1]  WARN -- : Skipping app/models/print_job.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:11.683776 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:11.820360 #1]  WARN -- : Skipping app/models/limber/qc_file.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:11.820403 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:11.896452 #1]  WARN -- : Skipping app/models/sequencescape_submission.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:11.896498 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:11.992565 #1]  WARN -- : Skipping app/models/labware_creators/final_tube.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:11.992621 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.399151 #1]  WARN -- : Skipping app/models/labware_creators/tagged_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.399195 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.455087 #1]  WARN -- : Skipping app/models/labware_creators/quadrant_split_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.455198 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.470038 #1]  WARN -- : Skipping app/models/labware_creators/pooled_tubes_by_submission_with_phi_x.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.470079 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.560261 #1]  WARN -- : Skipping app/models/labware_creators/multi_stamp_tubes.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.560384 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.578264 #1]  WARN -- : Skipping app/models/labware_creators/base.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.578314 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.591925 #1]  WARN -- : Skipping app/models/labware_creators/pooled_tubes_base.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.591976 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.611228 #1]  WARN -- : Skipping app/models/labware_creators/multi_plate_pool.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.611351 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.622568 #1]  WARN -- : Skipping app/models/labware_creators/custom_tagged_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.622635 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.740452 #1]  WARN -- : Skipping app/models/labware_creators/plate_split_to_tube_racks.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.740499 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.855750 #1]  WARN -- : Skipping app/models/labware_creators/quadrant_stamp_base.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.855798 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.862294 #1]  WARN -- : Skipping app/models/labware_creators/pooled_tubes_by_sample.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.862344 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:12.913390 #1]  WARN -- : Skipping app/models/labware_creators/final_tube_from_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:12.913439 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.006379 #1]  WARN -- : Skipping app/helpers/page_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.006426 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.012667 #1]  WARN -- : Skipping app/helpers/plate_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.012712 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.015346 #1]  WARN -- : Skipping app/helpers/labware_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.015382 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.019228 #1]  WARN -- : Skipping app/helpers/application_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.019284 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.062418 #1]  WARN -- : Skipping app/helpers/barcode_labels_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.062747 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.067034 #1]  WARN -- : Skipping app/controllers/qc_files_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.067071 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.101866 #1]  WARN -- : Skipping app/controllers/concerns/work_completion_behaviour.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.102167 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.106724 #1]  WARN -- : Skipping app/controllers/concerns/sequencescape_submission_behaviour.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.106798 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.149480 #1]  WARN -- : Skipping app/controllers/pipeline_work_in_progress_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.149524 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.158109 #1]  WARN -- : Skipping app/controllers/search_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.158146 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.278002 #1]  WARN -- : Skipping app/controllers/labware_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.278043 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.348097 #1]  WARN -- : Skipping app/controllers/robots_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.348148 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.362817 #1]  WARN -- : Skipping app/sequencescape/sequencescape/api/v2.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.362858 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.579810 #1]  WARN -- : Skipping app/sequencescape/sequencescape/api/v2/shared/has_requests.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.580086 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.803656 #1]  WARN -- : Skipping lib/well_helpers.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.803707 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.851881 #1]  WARN -- : Skipping lib/robot_configuration.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.851919 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:13.870735 #1]  WARN -- : Skipping lib/purpose_config.rb due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:13.870773 #1]  WARN -- : Response status: 422
6
duplication
View output
12
Parser process id: 12
codeclimate-parser socket not present
waiting 1s...
W, [2024-09-25T13:30:17.896544 #1]  WARN -- : Skipping app/frontend/javascript/shared/transfersLayouts.js due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:17.896579 #1]  WARN -- : Response status: 422
W, [2024-09-25T13:30:18.650099 #1]  WARN -- : Skipping app/frontend/javascript/multi-stamp/components/MultiStampLibrarySplitter.js due to CC::Parser::Client::HTTPError
W, [2024-09-25T13:30:18.650152 #1]  WARN -- : Response status: 422
I, [2024-09-25T13:30:19.103084 #1]  INFO -- : Skipping file ./app/models/ongoing_tube.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :states))

I, [2024-09-25T13:30:19.150834 #1]  INFO -- : Skipping file ./app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb due to exception (Racc::ParseError): ./app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb:8 :: parse error on value ")" (tRPAREN)

I, [2024-09-25T13:30:19.223450 #1]  INFO -- : Skipping file ./app/models/concerns/presenters/creation_behaviour.rb due to exception (Racc::ParseError): ./app/models/concerns/presenters/creation_behaviour.rb:29 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:19.247113 #1]  INFO -- : Skipping file ./app/models/concerns/presenters/extended_csv.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:lvar, :index))

I, [2024-09-25T13:30:19.335811 #1]  INFO -- : Skipping file ./app/models/concerns/labware_creators/tagged_plate_behaviour.rb due to exception (Racc::ParseError): ./app/models/concerns/labware_creators/tagged_plate_behaviour.rb:11 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:19.372008 #1]  INFO -- : Skipping file ./app/models/ongoing_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :states))

I, [2024-09-25T13:30:19.481753 #1]  INFO -- : Skipping file ./app/models/utility/pcr_cycles_csv_file_upload_config_base.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :input_amount_desired_min))

I, [2024-09-25T13:30:19.672739 #1]  INFO -- : Skipping file ./app/models/presenters/plate_presenter.rb due to exception (Racc::ParseError): ./app/models/presenters/plate_presenter.rb:39 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:19.737278 #1]  INFO -- : Skipping file ./app/models/labels/tube_label.rb due to exception (Racc::ParseError): ./app/models/labels/tube_label.rb:9 :: parse error on value ":" (tSYMBEG)

I, [2024-09-25T13:30:19.777823 #1]  INFO -- : Skipping file ./app/models/labels/tube_label_traction_compatible.rb due to exception (Racc::ParseError): ./app/models/labels/tube_label_traction_compatible.rb:30 :: parse error on value ":" (tSYMBEG)

I, [2024-09-25T13:30:19.841212 #1]  INFO -- : Skipping file ./app/models/state_changers.rb due to exception (Racc::ParseError): ./app/models/state_changers.rb:28 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:19.898179 #1]  INFO -- : Skipping file ./app/models/robots/bed/plate_to_tube_racks_bed.rb due to exception (Racc::ParseError): ./app/models/robots/bed/plate_to_tube_racks_bed.rb:20 :: parse error on value "," (tCOMMA)

I, [2024-09-25T13:30:20.039418 #1]  INFO -- : Skipping file ./app/models/labware_metadata.rb due to exception (Racc::ParseError): ./app/models/labware_metadata.rb:8 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:20.039487 #1]  INFO -- : Skipping file ./app/models/print_job.rb due to exception (Racc::ParseError): ./app/models/print_job.rb:10 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:20.130655 #1]  INFO -- : Skipping file ./app/models/limber/qc_file.rb due to exception (Racc::ParseError): ./app/models/limber/qc_file.rb:7 :: parse error on value ":" (tSYMBEG)

I, [2024-09-25T13:30:20.295416 #1]  INFO -- : Skipping file ./app/models/sequencescape_submission.rb due to exception (Racc::ParseError): ./app/models/sequencescape_submission.rb:39 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:20.352073 #1]  INFO -- : Skipping file ./app/models/labware_creators/final_tube.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :parents))

I, [2024-09-25T13:30:20.445983 #1]  INFO -- : Skipping file ./app/models/labware_creators/pcr_cycles_binned_plate/csv_file_base.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pcr_cycles_binned_plate/csv_file_base.rb:18 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:20.630220 #1]  INFO -- : Skipping file ./app/models/labware_creators/tagged_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :tag_plate))

I, [2024-09-25T13:30:20.703530 #1]  INFO -- : Skipping file ./app/models/labware_creators/quadrant_split_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :uuid))

I, [2024-09-25T13:30:20.710667 #1]  INFO -- : Skipping file ./app/models/labware_creators/pooled_tubes_by_submission_with_phi_x.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pooled_tubes_by_submission_with_phi_x.rb:20 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:20.855620 #1]  INFO -- : Skipping file ./app/models/labware_creators/multi_stamp_tubes.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :transfers))

I, [2024-09-25T13:30:20.868454 #1]  INFO -- : Skipping file ./app/models/labware_creators/base.rb due to exception (Racc::ParseError): ./app/models/labware_creators/base.rb:21 :: parse error on value "%i[" (error)

I, [2024-09-25T13:30:20.900568 #1]  INFO -- : Skipping file ./app/models/labware_creators/pooled_tubes_base.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pooled_tubes_base.rb:26 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:20.909927 #1]  INFO -- : Skipping file ./app/models/labware_creators/multi_plate_pool.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :transfers))

I, [2024-09-25T13:30:20.996145 #1]  INFO -- : Skipping file ./app/models/labware_creators/custom_tagged_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :tag_plate))

I, [2024-09-25T13:30:21.136319 #1]  INFO -- : Skipping file ./app/models/labware_creators/plate_split_to_tube_racks.rb due to exception (Racc::ParseError): ./app/models/labware_creators/plate_split_to_tube_racks.rb:48 :: parse error on value "%i[" (error)

I, [2024-09-25T13:30:21.177415 #1]  INFO -- : Skipping file ./app/models/labware_creators/custom_pooled_tubes/csv_file.rb due to exception (Racc::ParseError): ./app/models/labware_creators/custom_pooled_tubes/csv_file.rb:12 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.226756 #1]  INFO -- : Skipping file ./app/models/labware_creators/quadrant_stamp_base.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :transfers))

I, [2024-09-25T13:30:21.232257 #1]  INFO -- : Skipping file ./app/models/labware_creators/pooled_tubes_by_sample.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pooled_tubes_by_sample.rb:20 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.308675 #1]  INFO -- : Skipping file ./app/models/labware_creators/final_tube_from_plate.rb due to exception (Racc::ParseError): ./app/models/labware_creators/final_tube_from_plate.rb:44 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.308796 #1]  INFO -- : Skipping file ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack.rb due to exception (Racc::ParseError): ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack.rb:54 :: parse error on value "]" (tRBRACK)

I, [2024-09-25T13:30:21.347474 #1]  INFO -- : Skipping file ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack_with_rack_barcode.rb due to exception (Racc::ParseError): ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack_with_rack_barcode.rb:31 :: parse error on value "]" (tRBRACK)

I, [2024-09-25T13:30:21.369035 #1]  INFO -- : Skipping file ./app/helpers/page_helper.rb due to exception (Racc::ParseError): ./app/helpers/page_helper.rb:5 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.384372 #1]  INFO -- : Skipping file ./app/helpers/plate_helper.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:lvar, :pool_id))

I, [2024-09-25T13:30:21.409862 #1]  INFO -- : Skipping file ./app/helpers/labware_helper.rb due to exception (Racc::ParseError): ./app/helpers/labware_helper.rb:5 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.417160 #1]  INFO -- : Skipping file ./app/helpers/application_helper.rb due to exception (Racc::ParseError): ./app/helpers/application_helper.rb:30 :: parse error on value ")" (tRPAREN)

I, [2024-09-25T13:30:21.464956 #1]  INFO -- : Skipping file ./app/helpers/barcode_labels_helper.rb due to exception (Racc::ParseError): ./app/helpers/barcode_labels_helper.rb:5 :: parse error on value ":" (tSYMBEG)

I, [2024-09-25T13:30:21.467117 #1]  INFO -- : Skipping file ./app/controllers/qc_files_controller.rb due to exception (Racc::ParseError): ./app/controllers/qc_files_controller.rb:11 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.545310 #1]  INFO -- : Skipping file ./app/controllers/concerns/sequencescape_submission_behaviour.rb due to exception (Racc::ParseError): ./app/controllers/concerns/sequencescape_submission_behaviour.rb:23 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.546847 #1]  INFO -- : Skipping file ./app/controllers/concerns/work_completion_behaviour.rb due to exception (Racc::ParseError): ./app/controllers/concerns/work_completion_behaviour.rb:20 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.695454 #1]  INFO -- : Skipping file ./app/controllers/pipeline_work_in_progress_controller.rb due to exception (Racc::ParseError): ./app/controllers/pipeline_work_in_progress_controller.rb:20 :: parse error on value "&." (error)

I, [2024-09-25T13:30:21.695523 #1]  INFO -- : Skipping file ./app/controllers/search_controller.rb due to exception (Racc::ParseError): ./app/controllers/search_controller.rb:8 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.828889 #1]  INFO -- : Skipping file ./app/controllers/labware_controller.rb due to exception (Racc::ParseError): ./app/controllers/labware_controller.rb:11 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.868312 #1]  INFO -- : Skipping file ./app/controllers/robots_controller.rb due to exception (Racc::ParseError): ./app/controllers/robots_controller.rb:14 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:21.894593 #1]  INFO -- : Skipping file ./app/sequencescape/sequencescape/api/v2.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :child_plates))

I, [2024-09-25T13:30:22.016572 #1]  INFO -- : Skipping file ./app/sequencescape/sequencescape/api/v2/shared/has_requests.rb due to exception (Racc::ParseError): ./app/sequencescape/sequencescape/api/v2/shared/has_requests.rb:44 :: parse error on value "&." (error)

I, [2024-09-25T13:30:22.133418 #1]  INFO -- : Skipping file ./lib/well_helpers.rb due to exception (Racc::ParseError): ./lib/well_helpers.rb:9 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:22.176718 #1]  INFO -- : Skipping file ./lib/robot_configuration.rb due to exception (Racc::ParseError): ./lib/robot_configuration.rb:9 :: parse error on value ":" (tCOLON)

I, [2024-09-25T13:30:22.191660 #1]  INFO -- : Skipping file ./lib/purpose_config.rb due to exception (Racc::ParseError): ./lib/purpose_config.rb:47 :: parse error on value ":" (tSYMBEG)