sanger/limber

codeclimate validate-config
No errors or warnings found in .codeclimate.json.

codeclimate prepare

determining required images
docker pull codeclimate/codeclimate-structure:b1673
b1673: Pulling from codeclimate/codeclimate-structure
bff3e048017e: Pulling fs layer
339148ecceb7: Pulling fs layer
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Digest: sha256:7880f01608ed54b763671e045bd8a2e774b3ad2d41f674f0a7e2af2a1195fca5
Status: Image is up to date for registry.prod.codeclimate.net/codeclimate/codeclimate-structure:b1673
docker pull codeclimate/codeclimate-duplication:b1329
b1329: Pulling from codeclimate/codeclimate-duplication
bff3e048017e: Already exists
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Digest: sha256:08c94e28c0e5d2d83c4d56b338edbdb742d269db6facd9d6477b953dd95c4a14
Status: Image is up to date for registry.prod.codeclimate.net/codeclimate/codeclimate-duplication:b1329

12
Parser process id: 12
codeclimate-parser socket not present
waiting 1s...
W, [2024-10-24T07:21:30.735209 #1]  WARN -- : Skipping app/frontend/javascript/shared/transfersLayouts.js due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:30.735250 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:31.141757 #1]  WARN -- : Skipping app/frontend/javascript/multi-stamp/components/MultiStampLibrarySplitter.js due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:31.141819 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:32.120033 #1]  WARN -- : Skipping app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:32.120081 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:32.191444 #1]  WARN -- : Skipping app/models/concerns/presenters/extended_csv.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:32.191480 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:32.409370 #1]  WARN -- : Skipping app/models/utility/pcr_cycles_csv_file_upload_config_base.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:32.409406 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:32.624142 #1]  WARN -- : Skipping app/models/presenters/plate_presenter.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:32.624182 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:33.081653 #1]  WARN -- : Skipping app/models/labware_metadata.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:33.081688 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:33.261665 #1]  WARN -- : Skipping app/models/sequencescape_submission.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:33.261704 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:33.345619 #1]  WARN -- : Skipping app/models/labware_creators/final_tube.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:33.345664 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:33.610018 #1]  WARN -- : Skipping app/models/labware_creators/tagged_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:33.610056 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:33.655946 #1]  WARN -- : Skipping app/models/labware_creators/quadrant_split_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:33.655984 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:33.798737 #1]  WARN -- : Skipping app/models/labware_creators/base.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:33.798788 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:33.847763 #1]  WARN -- : Skipping app/models/labware_creators/custom_tagged_plate.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:33.847799 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:33.936366 #1]  WARN -- : Skipping app/models/labware_creators/plate_split_to_tube_racks.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:33.936404 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.021004 #1]  WARN -- : Skipping app/models/labware_creators/quadrant_stamp_base.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.021036 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.034589 #1]  WARN -- : Skipping app/models/labware_creators/pooled_tubes_by_sample.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.034623 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.167702 #1]  WARN -- : Skipping app/helpers/page_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.167736 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.178230 #1]  WARN -- : Skipping app/helpers/labware_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.178264 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.181456 #1]  WARN -- : Skipping app/helpers/application_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.181487 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.212229 #1]  WARN -- : Skipping app/helpers/barcode_labels_helper.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.212271 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.291125 #1]  WARN -- : Skipping app/controllers/search_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.291161 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.360980 #1]  WARN -- : Skipping app/controllers/labware_controller.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.361016 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.437964 #1]  WARN -- : Skipping app/sequencescape/sequencescape/api/v2.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.438001 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.626488 #1]  WARN -- : Skipping app/sequencescape/sequencescape/api/v2/shared/has_requests.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.626533 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.794152 #1]  WARN -- : Skipping lib/well_helpers.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.794198 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:34.818010 #1]  WARN -- : Skipping lib/robot_configuration.rb due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:34.818056 #1]  WARN -- : Response status: 422

12
Parser process id: 12
codeclimate-parser socket not present
waiting 1s...
W, [2024-10-24T07:21:38.300952 #1]  WARN -- : Skipping app/frontend/javascript/shared/transfersLayouts.js due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:38.300997 #1]  WARN -- : Response status: 422
W, [2024-10-24T07:21:38.858768 #1]  WARN -- : Skipping app/frontend/javascript/multi-stamp/components/MultiStampLibrarySplitter.js due to CC::Parser::Client::HTTPError
W, [2024-10-24T07:21:38.859075 #1]  WARN -- : Response status: 422
I, [2024-10-24T07:21:39.236125 #1]  INFO -- : Skipping file ./app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb due to exception (Racc::ParseError): ./app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb:8 :: parse error on value ")" (tRPAREN)

I, [2024-10-24T07:21:39.317399 #1]  INFO -- : Skipping file ./app/models/concerns/presenters/extended_csv.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:lvar, :index))

I, [2024-10-24T07:21:39.451933 #1]  INFO -- : Skipping file ./app/models/utility/pcr_cycles_csv_file_upload_config_base.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :input_amount_desired_min))

I, [2024-10-24T07:21:39.582273 #1]  INFO -- : Skipping file ./app/models/presenters/plate_presenter.rb due to exception (Racc::ParseError): ./app/models/presenters/plate_presenter.rb:39 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:39.645707 #1]  INFO -- : Skipping file ./app/models/labels/tube_label.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :first_line))

I, [2024-10-24T07:21:39.829455 #1]  INFO -- : Skipping file ./app/models/labware_metadata.rb due to exception (Racc::ParseError): ./app/models/labware_metadata.rb:8 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:39.958232 #1]  INFO -- : Skipping file ./app/models/sequencescape_submission.rb due to exception (Racc::ParseError): ./app/models/sequencescape_submission.rb:39 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:40.008241 #1]  INFO -- : Skipping file ./app/models/labware_creators/final_tube.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :parents))

I, [2024-10-24T07:21:40.057145 #1]  INFO -- : Skipping file ./app/models/labware_creators/pcr_cycles_binned_plate/csv_file_base.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pcr_cycles_binned_plate/csv_file_base.rb:18 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:40.204330 #1]  INFO -- : Skipping file ./app/models/labware_creators/tagged_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :tag_plate))

I, [2024-10-24T07:21:40.278088 #1]  INFO -- : Skipping file ./app/models/labware_creators/quadrant_split_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :uuid))

I, [2024-10-24T07:21:40.355385 #1]  INFO -- : Skipping file ./app/models/labware_creators/base.rb due to exception (Racc::ParseError): ./app/models/labware_creators/base.rb:21 :: parse error on value "%i[" (error)

I, [2024-10-24T07:21:40.420981 #1]  INFO -- : Skipping file ./app/models/labware_creators/custom_tagged_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :tag_plate))

I, [2024-10-24T07:21:40.530242 #1]  INFO -- : Skipping file ./app/models/labware_creators/plate_split_to_tube_racks.rb due to exception (Racc::ParseError): ./app/models/labware_creators/plate_split_to_tube_racks.rb:48 :: parse error on value "%i[" (error)

I, [2024-10-24T07:21:40.564143 #1]  INFO -- : Skipping file ./app/models/labware_creators/custom_pooled_tubes/csv_file.rb due to exception (Racc::ParseError): ./app/models/labware_creators/custom_pooled_tubes/csv_file.rb:12 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:40.684347 #1]  INFO -- : Skipping file ./app/models/labware_creators/quadrant_stamp_base.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :transfers))

I, [2024-10-24T07:21:40.687281 #1]  INFO -- : Skipping file ./app/models/labware_creators/pooled_tubes_by_sample.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pooled_tubes_by_sample.rb:20 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:40.779245 #1]  INFO -- : Skipping file ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack.rb due to exception (Racc::ParseError): ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack.rb:54 :: parse error on value "]" (tRBRACK)

I, [2024-10-24T07:21:40.796410 #1]  INFO -- : Skipping file ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack_with_rack_barcode.rb due to exception (Racc::ParseError): ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack_with_rack_barcode.rb:31 :: parse error on value "]" (tRBRACK)

I, [2024-10-24T07:21:40.809305 #1]  INFO -- : Skipping file ./app/helpers/page_helper.rb due to exception (Racc::ParseError): ./app/helpers/page_helper.rb:5 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:40.829352 #1]  INFO -- : Skipping file ./app/helpers/labware_helper.rb due to exception (Racc::ParseError): ./app/helpers/labware_helper.rb:5 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:40.843645 #1]  INFO -- : Skipping file ./app/helpers/application_helper.rb due to exception (Racc::ParseError): ./app/helpers/application_helper.rb:30 :: parse error on value ")" (tRPAREN)

I, [2024-10-24T07:21:40.883419 #1]  INFO -- : Skipping file ./app/helpers/barcode_labels_helper.rb due to exception (Racc::ParseError): ./app/helpers/barcode_labels_helper.rb:5 :: parse error on value ":" (tSYMBEG)

I, [2024-10-24T07:21:41.030373 #1]  INFO -- : Skipping file ./app/controllers/search_controller.rb due to exception (Racc::ParseError): ./app/controllers/search_controller.rb:8 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:41.139745 #1]  INFO -- : Skipping file ./app/controllers/labware_controller.rb due to exception (Racc::ParseError): ./app/controllers/labware_controller.rb:11 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:41.164822 #1]  INFO -- : Skipping file ./app/controllers/robots_controller.rb due to exception (Racc::ParseError): ./app/controllers/robots_controller.rb:14 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:41.201622 #1]  INFO -- : Skipping file ./app/sequencescape/sequencescape/api/v2.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :child_plates))

I, [2024-10-24T07:21:41.297204 #1]  INFO -- : Skipping file ./app/sequencescape/sequencescape/api/v2/shared/has_requests.rb due to exception (Racc::ParseError): ./app/sequencescape/sequencescape/api/v2/shared/has_requests.rb:44 :: parse error on value "&." (error)

I, [2024-10-24T07:21:41.411124 #1]  INFO -- : Skipping file ./lib/well_helpers.rb due to exception (Racc::ParseError): ./lib/well_helpers.rb:9 :: parse error on value ":" (tCOLON)

I, [2024-10-24T07:21:41.465406 #1]  INFO -- : Skipping file ./lib/robot_configuration.rb due to exception (Racc::ParseError): ./lib/robot_configuration.rb:9 :: parse error on value ":" (tCOLON)