Build #3407 - sanger/limber

fix(bait-layout-preview): update to use well_layout to fix baits not being displayed #3407

Ben Topping authored 3d356d91

complete00:00:28

1	git clone	00:00:02
2	codeclimate validate-config	00:00:03	View output
`codeclimate validate-config No errors or warnings found in .codeclimate.json.`
3	codeclimate prepare	00:00:01	View output
`codeclimate prepare`
4	builder pull-engines	00:00:01	View output
`determining required images`
5	structure	00:00:08	View output
12 Parser process id: 12 codeclimate-parser socket not present waiting 1s... W, [2024-10-31T15:01:28.770152 #1] WARN -- : Skipping app/frontend/javascript/shared/transfersLayouts.js due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:28.770194 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:29.250100 #1] WARN -- : Skipping app/frontend/javascript/multi-stamp/components/MultiStampLibrarySplitter.js due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:29.250148 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:30.777234 #1] WARN -- : Skipping app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:30.777275 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:30.859044 #1] WARN -- : Skipping app/models/concerns/presenters/extended_csv.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:30.859096 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:31.119981 #1] WARN -- : Skipping app/models/utility/pcr_cycles_csv_file_upload_config_base.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:31.120017 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:31.359015 #1] WARN -- : Skipping app/models/presenters/plate_presenter.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:31.359053 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:31.854981 #1] WARN -- : Skipping app/models/labware_metadata.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:31.855016 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:32.068178 #1] WARN -- : Skipping app/models/sequencescape_submission.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:32.068298 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:32.154380 #1] WARN -- : Skipping app/models/labware_creators/final_tube.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:32.154413 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:32.489664 #1] WARN -- : Skipping app/models/labware_creators/tagged_plate.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:32.489761 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:32.545359 #1] WARN -- : Skipping app/models/labware_creators/quadrant_split_plate.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:32.545398 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:32.682817 #1] WARN -- : Skipping app/models/labware_creators/base.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:32.682855 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:32.737911 #1] WARN -- : Skipping app/models/labware_creators/custom_tagged_plate.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:32.737948 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:32.829647 #1] WARN -- : Skipping app/models/labware_creators/plate_split_to_tube_racks.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:32.829684 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:32.965340 #1] WARN -- : Skipping app/models/labware_creators/quadrant_stamp_base.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:32.965380 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:32.982398 #1] WARN -- : Skipping app/models/labware_creators/pooled_tubes_by_sample.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:32.982439 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:33.110746 #1] WARN -- : Skipping app/helpers/page_helper.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:33.110783 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:33.123160 #1] WARN -- : Skipping app/helpers/labware_helper.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:33.123204 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:33.126652 #1] WARN -- : Skipping app/helpers/application_helper.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:33.126685 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:33.164099 #1] WARN -- : Skipping app/helpers/barcode_labels_helper.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:33.164138 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:33.266275 #1] WARN -- : Skipping app/controllers/search_controller.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:33.266312 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:33.356471 #1] WARN -- : Skipping app/controllers/labware_controller.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:33.356520 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:33.434114 #1] WARN -- : Skipping app/sequencescape/sequencescape/api/v2.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:33.434153 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:33.667764 #1] WARN -- : Skipping app/sequencescape/sequencescape/api/v2/shared/has_requests.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:33.667808 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:33.844171 #1] WARN -- : Skipping lib/well_helpers.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:33.844221 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:33.875066 #1] WARN -- : Skipping lib/robot_configuration.rb due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:33.875160 #1] WARN -- : Response status: 422
6	duplication	00:00:07	View output
12 Parser process id: 12 codeclimate-parser socket not present waiting 1s... W, [2024-10-31T15:01:37.700646 #1] WARN -- : Skipping app/frontend/javascript/shared/transfersLayouts.js due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:37.700707 #1] WARN -- : Response status: 422 W, [2024-10-31T15:01:38.433286 #1] WARN -- : Skipping app/frontend/javascript/multi-stamp/components/MultiStampLibrarySplitter.js due to CC::Parser::Client::HTTPError W, [2024-10-31T15:01:38.433336 #1] WARN -- : Response status: 422 I, [2024-10-31T15:01:38.884236 #1] INFO -- : Skipping file ./app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb due to exception (Racc::ParseError): ./app/models/concerns/presenters/statemachine/state_does_not_allow_child_creation.rb:8 :: parse error on value ")" (tRPAREN) I, [2024-10-31T15:01:38.994189 #1] INFO -- : Skipping file ./app/models/concerns/presenters/extended_csv.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:lvar, :index)) I, [2024-10-31T15:01:39.174519 #1] INFO -- : Skipping file ./app/models/utility/pcr_cycles_csv_file_upload_config_base.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :input_amount_desired_min)) I, [2024-10-31T15:01:39.331376 #1] INFO -- : Skipping file ./app/models/presenters/plate_presenter.rb due to exception (Racc::ParseError): ./app/models/presenters/plate_presenter.rb:39 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:39.412217 #1] INFO -- : Skipping file ./app/models/labels/tube_label.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :first_line)) I, [2024-10-31T15:01:39.639541 #1] INFO -- : Skipping file ./app/models/labware_metadata.rb due to exception (Racc::ParseError): ./app/models/labware_metadata.rb:8 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:39.801678 #1] INFO -- : Skipping file ./app/models/sequencescape_submission.rb due to exception (Racc::ParseError): ./app/models/sequencescape_submission.rb:39 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:39.863661 #1] INFO -- : Skipping file ./app/models/labware_creators/final_tube.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :parents)) I, [2024-10-31T15:01:39.933704 #1] INFO -- : Skipping file ./app/models/labware_creators/pcr_cycles_binned_plate/csv_file_base.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pcr_cycles_binned_plate/csv_file_base.rb:18 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:40.124607 #1] INFO -- : Skipping file ./app/models/labware_creators/tagged_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :tag_plate)) I, [2024-10-31T15:01:40.192203 #1] INFO -- : Skipping file ./app/models/labware_creators/quadrant_split_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :uuid)) I, [2024-10-31T15:01:40.276008 #1] INFO -- : Skipping file ./app/models/labware_creators/base.rb due to exception (Racc::ParseError): ./app/models/labware_creators/base.rb:21 :: parse error on value "%i[" (error) I, [2024-10-31T15:01:40.335017 #1] INFO -- : Skipping file ./app/models/labware_creators/custom_tagged_plate.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :tag_plate)) I, [2024-10-31T15:01:40.447619 #1] INFO -- : Skipping file ./app/models/labware_creators/plate_split_to_tube_racks.rb due to exception (Racc::ParseError): ./app/models/labware_creators/plate_split_to_tube_racks.rb:48 :: parse error on value "%i[" (error) I, [2024-10-31T15:01:40.486243 #1] INFO -- : Skipping file ./app/models/labware_creators/custom_pooled_tubes/csv_file.rb due to exception (Racc::ParseError): ./app/models/labware_creators/custom_pooled_tubes/csv_file.rb:12 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:40.573221 #1] INFO -- : Skipping file ./app/models/labware_creators/quadrant_stamp_base.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :transfers)) I, [2024-10-31T15:01:40.610373 #1] INFO -- : Skipping file ./app/models/labware_creators/pooled_tubes_by_sample.rb due to exception (Racc::ParseError): ./app/models/labware_creators/pooled_tubes_by_sample.rb:20 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:40.668978 #1] INFO -- : Skipping file ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack.rb due to exception (Racc::ParseError): ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack.rb:54 :: parse error on value "]" (tRBRACK) I, [2024-10-31T15:01:40.689866 #1] INFO -- : Skipping file ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack_with_rack_barcode.rb due to exception (Racc::ParseError): ./app/models/labware_creators/common_file_handling/csv_file_for_tube_rack_with_rack_barcode.rb:31 :: parse error on value "]" (tRBRACK) I, [2024-10-31T15:01:40.702405 #1] INFO -- : Skipping file ./app/helpers/page_helper.rb due to exception (Racc::ParseError): ./app/helpers/page_helper.rb:5 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:40.717337 #1] INFO -- : Skipping file ./app/helpers/labware_helper.rb due to exception (Racc::ParseError): ./app/helpers/labware_helper.rb:5 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:40.728735 #1] INFO -- : Skipping file ./app/helpers/application_helper.rb due to exception (Racc::ParseError): ./app/helpers/application_helper.rb:30 :: parse error on value ")" (tRPAREN) I, [2024-10-31T15:01:40.768362 #1] INFO -- : Skipping file ./app/helpers/barcode_labels_helper.rb due to exception (Racc::ParseError): ./app/helpers/barcode_labels_helper.rb:5 :: parse error on value ":" (tSYMBEG) I, [2024-10-31T15:01:40.892637 #1] INFO -- : Skipping file ./app/controllers/search_controller.rb due to exception (Racc::ParseError): ./app/controllers/search_controller.rb:8 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:41.000423 #1] INFO -- : Skipping file ./app/controllers/labware_controller.rb due to exception (Racc::ParseError): ./app/controllers/labware_controller.rb:11 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:41.027451 #1] INFO -- : Skipping file ./app/controllers/robots_controller.rb due to exception (Racc::ParseError): ./app/controllers/robots_controller.rb:14 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:41.062583 #1] INFO -- : Skipping file ./app/sequencescape/sequencescape/api/v2.rb due to exception (RubyParser::SyntaxError): Odd number (2) list for Hash. s(:array, s(:call, nil, :child_plates)) I, [2024-10-31T15:01:41.176120 #1] INFO -- : Skipping file ./app/sequencescape/sequencescape/api/v2/shared/has_requests.rb due to exception (Racc::ParseError): ./app/sequencescape/sequencescape/api/v2/shared/has_requests.rb:44 :: parse error on value "&." (error) I, [2024-10-31T15:01:41.316846 #1] INFO -- : Skipping file ./lib/well_helpers.rb due to exception (Racc::ParseError): ./lib/well_helpers.rb:9 :: parse error on value ":" (tCOLON) I, [2024-10-31T15:01:41.376902 #1] INFO -- : Skipping file ./lib/robot_configuration.rb due to exception (Racc::ParseError): ./lib/robot_configuration.rb:9 :: parse error on value ":" (tCOLON)