Build #4814 - sanger/sequencescape

Fix another test that was broken by adding server side validation to these fields #4814

Katy Taylor authored 184bd681

complete00:01:14

1	git clone	00:00:02
2	codeclimate validate-config	00:00:01	View output
`codeclimate validate-config No errors or warnings found in .codeclimate.yml.`
3	codeclimate prepare	00:00:01	View output
`codeclimate prepare`
4	builder pull-engines	00:00:00	View output
`determining required images`
5	structure	00:00:19	View output
12 Parser process id: 12 codeclimate-parser socket not present waiting 1s... W, [2024-04-16T12:52:49.225523 #1] WARN -- : Skipping app/models/request_type/validator.rb due to CC::Parser::Client::HTTPError W, [2024-04-16T12:52:49.225562 #1] WARN -- : Response status: 422 W, [2024-04-16T12:52:52.762870 #1] WARN -- : Skipping app/models/submission/order_presenter.rb due to CC::Parser::Client::HTTPError W, [2024-04-16T12:52:52.762910 #1] WARN -- : Response status: 422 W, [2024-04-16T12:52:57.927575 #1] WARN -- : Skipping app/api/core/abilities.rb due to CC::Parser::Client::HTTPError W, [2024-04-16T12:52:57.927691 #1] WARN -- : Response status: 422 W, [2024-04-16T12:52:58.352319 #1] WARN -- : Skipping app/api/core/endpoint/basic_handler/actions/guards.rb due to CC::Parser::Client::HTTPError W, [2024-04-16T12:52:58.352355 #1] WARN -- : Response status: 422
6	duplication	00:00:13	View output
12 Parser process id: 12 codeclimate-parser socket not present waiting 1s... I, [2024-04-16T12:53:06.065454 #1] INFO -- : Skipping file ./app/uat_actions/uat_actions/generate_tubes.rb due to exception (Racc::ParseError): ./app/uat_actions/uat_actions/generate_tubes.rb:11 :: parse error on value ":" (tCOLON) I, [2024-04-16T12:53:07.116022 #1] INFO -- : Skipping file ./app/models/request_type/validator.rb due to exception (Racc::ParseError): ./app/models/request_type/validator.rb:21 :: parse error on value ":" (tCOLON) I, [2024-04-16T12:53:07.390841 #1] INFO -- : Skipping file ./app/models/tube_rack.rb due to exception (Racc::ParseError): ./app/models/tube_rack.rb:10 :: parse error on value ":" (tCOLON) I, [2024-04-16T12:53:07.703424 #1] INFO -- : Skipping file ./app/models/cherrypick/volume_by_nano_grams.rb due to exception (Racc::ParseError): ./app/models/cherrypick/volume_by_nano_grams.rb:84 :: parse error on value ")" (tRPAREN) I, [2024-04-16T12:53:07.807556 #1] INFO -- : Skipping file ./app/models/plate_volume.rb due to exception (Racc::ParseError): ./app/models/plate_volume.rb:9 :: parse error on value ":" (tCOLON) I, [2024-04-16T12:53:08.105292 #1] INFO -- : Skipping file ./app/models/plate/quad_creator.rb due to exception (Racc::ParseError): ./app/models/plate/quad_creator.rb:10 :: parse error on value ":" (tCOLON) I, [2024-04-16T12:53:08.648399 #1] INFO -- : Skipping file ./app/models/pulldown/plate_purposes.rb due to exception (Racc::ParseError): ./app/models/pulldown/plate_purposes.rb:75 :: parse error on value ":" (tCOLON) I, [2024-04-16T12:53:09.400320 #1] INFO -- : Skipping file ./app/models/submission/order_presenter.rb due to exception (Racc::ParseError): ./app/models/submission/order_presenter.rb:20 :: parse error on value "..." (tDOT3) I, [2024-04-16T12:53:09.834352 #1] INFO -- : Skipping file ./app/models/qc_report/file.rb due to exception (Racc::ParseError): ./app/models/qc_report/file.rb:36 :: parse error on value ["rescue", 36] (kRESCUE) I, [2024-04-16T12:53:12.390576 #1] INFO -- : Skipping file ./app/api/core/abilities.rb due to exception (Racc::ParseError): ./app/api/core/abilities.rb:46 :: parse error on value "..." (tDOT3) I, [2024-04-16T12:53:12.657107 #1] INFO -- : Skipping file ./app/api/core/endpoint/basic_handler/actions/guards.rb due to exception (Racc::ParseError): ./app/api/core/endpoint/basic_handler/actions/guards.rb:29 :: parse error on value ":" (tCOLON) I, [2024-04-16T12:53:13.198672 #1] INFO -- : Skipping file ./app/sequencescape_excel/sequencescape_excel/column_list.rb due to exception (Racc::ParseError): ./app/sequencescape_excel/sequencescape_excel/column_list.rb:8 :: parse error on value ":" (tCOLON)
7	fixme fixme engine documentation	00:00:00
8	reek reek engine documentation	00:00:19	View output
!!! Source 'app/models/request_type/validator.rb' cannot be processed by Reek due to a syntax error in the source file. This is a problem that is outside of Reek's scope and should be fixed by you, the user, in order for Reek being able to continue. Things you can try: - Check the syntax of the problematic file - If the file is not in fact a Ruby file, exclude it in your .reek.yml file Exception message: #<Parser::SyntaxError: unexpected token tDOT3> Original backtrace: /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/diagnostic/engine.rb:72:in `process' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:286:in `on_error' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `_racc_do_parse_c' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `do_parse' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:190:in `parse' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:207:in `parse_with_comments' /usr/src/app/lib/reek/source/source_code.rb:117:in `parse' /usr/src/app/lib/reek/source/source_code.rb:53:in `syntax_tree' /usr/src/app/lib/reek/examiner.rb:116:in `syntax_tree' /usr/src/app/lib/reek/examiner.rb:120:in `examine_tree' /usr/src/app/lib/reek/examiner.rb:94:in `block in run' /usr/src/app/lib/reek/examiner.rb:104:in `wrap_exceptions' /usr/src/app/lib/reek/examiner.rb:93:in `run' /usr/src/app/lib/reek/examiner.rb:61:in `smells' /usr/src/app/lib/reek/examiner.rb:69:in `smells_count' /usr/src/app/lib/reek/report/base_report.rb:44:in `add_examiner' /usr/src/app/lib/reek/cli/command/report_command.rb:26:in `block in populate_reporter_with_smells' /usr/src/app/lib/reek/cli/command/report_command.rb:25:in `each' /usr/src/app/lib/reek/cli/command/report_command.rb:25:in `populate_reporter_with_smells' /usr/src/app/lib/reek/cli/command/report_command.rb:17:in `execute' /usr/src/app/lib/reek/cli/application.rb:32:in `execute' /usr/src/app/bin/code_climate_reek:68:in `<main>' !!! !!! Source 'app/models/submission/order_presenter.rb' cannot be processed by Reek due to a syntax error in the source file. This is a problem that is outside of Reek's scope and should be fixed by you, the user, in order for Reek being able to continue. Things you can try: - Check the syntax of the problematic file - If the file is not in fact a Ruby file, exclude it in your .reek.yml file Exception message: #<Parser::SyntaxError: unexpected token tDOT3> Original backtrace: /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/diagnostic/engine.rb:72:in `process' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:286:in `on_error' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `_racc_do_parse_c' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `do_parse' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:190:in `parse' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:207:in `parse_with_comments' /usr/src/app/lib/reek/source/source_code.rb:117:in `parse' /usr/src/app/lib/reek/source/source_code.rb:53:in `syntax_tree' /usr/src/app/lib/reek/examiner.rb:116:in `syntax_tree' /usr/src/app/lib/reek/examiner.rb:120:in `examine_tree' /usr/src/app/lib/reek/examiner.rb:94:in `block in run' /usr/src/app/lib/reek/examiner.rb:104:in `wrap_exceptions' /usr/src/app/lib/reek/examiner.rb:93:in `run' /usr/src/app/lib/reek/examiner.rb:61:in `smells' /usr/src/app/lib/reek/examiner.rb:69:in `smells_count' /usr/src/app/lib/reek/report/base_report.rb:44:in `add_examiner' /usr/src/app/lib/reek/cli/command/report_command.rb:26:in `block in populate_reporter_with_smells' /usr/src/app/lib/reek/cli/command/report_command.rb:25:in `each' /usr/src/app/lib/reek/cli/command/report_command.rb:25:in `populate_reporter_with_smells' /usr/src/app/lib/reek/cli/command/report_command.rb:17:in `execute' /usr/src/app/lib/reek/cli/application.rb:32:in `execute' /usr/src/app/bin/code_climate_reek:68:in `<main>' !!! !!! Source 'app/api/core/abilities.rb' cannot be processed by Reek due to a syntax error in the source file. This is a problem that is outside of Reek's scope and should be fixed by you, the user, in order for Reek being able to continue. Things you can try: - Check the syntax of the problematic file - If the file is not in fact a Ruby file, exclude it in your .reek.yml file Exception message: #<Parser::SyntaxError: unexpected token tDOT3> Original backtrace: /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/diagnostic/engine.rb:72:in `process' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:286:in `on_error' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `_racc_do_parse_c' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `do_parse' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:190:in `parse' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:207:in `parse_with_comments' /usr/src/app/lib/reek/source/source_code.rb:117:in `parse' /usr/src/app/lib/reek/source/source_code.rb:53:in `syntax_tree' /usr/src/app/lib/reek/examiner.rb:116:in `syntax_tree' /usr/src/app/lib/reek/examiner.rb:120:in `examine_tree' /usr/src/app/lib/reek/examiner.rb:94:in `block in run' /usr/src/app/lib/reek/examiner.rb:104:in `wrap_exceptions' /usr/src/app/lib/reek/examiner.rb:93:in `run' /usr/src/app/lib/reek/examiner.rb:61:in `smells' /usr/src/app/lib/reek/examiner.rb:69:in `smells_count' /usr/src/app/lib/reek/report/base_report.rb:44:in `add_examiner' /usr/src/app/lib/reek/cli/command/report_command.rb:26:in `block in populate_reporter_with_smells' /usr/src/app/lib/reek/cli/command/report_command.rb:25:in `each' /usr/src/app/lib/reek/cli/command/report_command.rb:25:in `populate_reporter_with_smells' /usr/src/app/lib/reek/cli/command/report_command.rb:17:in `execute' /usr/src/app/lib/reek/cli/application.rb:32:in `execute' /usr/src/app/bin/code_climate_reek:68:in `<main>' !!! !!! Source 'app/api/core/endpoint/basic_handler/actions/guards.rb' cannot be processed by Reek due to a syntax error in the source file. This is a problem that is outside of Reek's scope and should be fixed by you, the user, in order for Reek being able to continue. Things you can try: - Check the syntax of the problematic file - If the file is not in fact a Ruby file, exclude it in your .reek.yml file Exception message: #<Parser::SyntaxError: unexpected token tDOT3> Original backtrace: /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/diagnostic/engine.rb:72:in `process' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:286:in `on_error' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `_racc_do_parse_c' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `do_parse' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:190:in `parse' /usr/local/bundle/gems/parser-3.0.2.0/lib/parser/base.rb:207:in `parse_with_comments' /usr/src/app/lib/reek/source/source_code.rb:117:in `parse' /usr/src/app/lib/reek/source/source_code.rb:53:in `syntax_tree' /usr/src/app/lib/reek/examiner.rb:116:in `syntax_tree' /usr/src/app/lib/reek/examiner.rb:120:in `examine_tree' /usr/src/app/lib/reek/examiner.rb:94:in `block in run' /usr/src/app/lib/reek/examiner.rb:104:in `wrap_exceptions' /usr/src/app/lib/reek/examiner.rb:93:in `run' /usr/src/app/lib/reek/examiner.rb:61:in `smells' /usr/src/app/lib/reek/examiner.rb:69:in `smells_count' /usr/src/app/lib/reek/report/base_report.rb:44:in `add_examiner' /usr/src/app/lib/reek/cli/command/report_command.rb:26:in `block in populate_reporter_with_smells' /usr/src/app/lib/reek/cli/command/report_command.rb:25:in `each' /usr/src/app/lib/reek/cli/command/report_command.rb:25:in `populate_reporter_with_smells' /usr/src/app/lib/reek/cli/command/report_command.rb:17:in `execute' /usr/src/app/lib/reek/cli/application.rb:32:in `execute' /usr/src/app/bin/code_climate_reek:68:in `<main>' !!!
9	bundler-audit bundler-audit engine documentation	00:00:01
10	flog flog engine documentation	00:00:07	View output
ERROR: parsing ruby file app/models/request_type/validator.rb Racc::ParseError: app/models/request_type/validator.rb:77 :: parse error on value "..." (tDOT3) at: /usr/local/lib/ruby/2.6.0/racc/parser.rb:528:in `on_error' /usr/local/bundle/gems/ruby_parser-3.13.1/lib/ruby_parser_extras.rb:1179:in `on_error' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `_racc_do_parse_c' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `do_parse' /usr/local/bundle/gems/ruby_parser-3.13.1/lib/ruby_parser_extras.rb:1086:in `block in process' ERROR: parsing ruby file app/models/submission/order_presenter.rb Racc::ParseError: app/models/submission/order_presenter.rb:20 :: parse error on value "..." (tDOT3) at: /usr/local/lib/ruby/2.6.0/racc/parser.rb:528:in `on_error' /usr/local/bundle/gems/ruby_parser-3.13.1/lib/ruby_parser_extras.rb:1179:in `on_error' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `_racc_do_parse_c' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `do_parse' /usr/local/bundle/gems/ruby_parser-3.13.1/lib/ruby_parser_extras.rb:1086:in `block in process' ERROR: parsing ruby file app/api/core/abilities.rb Racc::ParseError: app/api/core/abilities.rb:46 :: parse error on value "..." (tDOT3) at: /usr/local/lib/ruby/2.6.0/racc/parser.rb:528:in `on_error' /usr/local/bundle/gems/ruby_parser-3.13.1/lib/ruby_parser_extras.rb:1179:in `on_error' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `_racc_do_parse_c' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `do_parse' /usr/local/bundle/gems/ruby_parser-3.13.1/lib/ruby_parser_extras.rb:1086:in `block in process' ERROR: parsing ruby file app/api/core/endpoint/basic_handler/actions/guards.rb Racc::ParseError: app/api/core/endpoint/basic_handler/actions/guards.rb:47 :: parse error on value "..." (tDOT3) at: /usr/local/lib/ruby/2.6.0/racc/parser.rb:528:in `on_error' /usr/local/bundle/gems/ruby_parser-3.13.1/lib/ruby_parser_extras.rb:1179:in `on_error' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `_racc_do_parse_c' /usr/local/lib/ruby/2.6.0/racc/parser.rb:259:in `do_parse' /usr/local/bundle/gems/ruby_parser-3.13.1/lib/ruby_parser_extras.rb:1086:in `block in process'