12
Parser process id: 12
codeclimate-parser socket not present
waiting 1s...
I, [2024-05-04T04:13:09.645706 #1] INFO -- : Skipping file ./spectrochempy/examples/analysis/a_decomposition/plot_mcrals_chrom1.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 40
print(f"{ds.name} : {ds.shape}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:09.682812 #1] INFO -- : Skipping file ./spectrochempy/examples/analysis/c_curvefitting/plot_lstsq_single_equation.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 53
plt.title(f"Linear regression, $R^2={rsquare:.3f}$")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:09.693776 #1] INFO -- : Skipping file ./spectrochempy/examples/analysis/c_curvefitting/plot_fit.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 92
scp.info_(f"numbers of components: {f1.n_components}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:09.752611 #1] INFO -- : Skipping file ./spectrochempy/examples/processing/filtering/plot_filter.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 42
ax = diff.plot(clear=False, ls="-", lw=1, label=f"difference (std={s})")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:09.793458 #1] INFO -- : Skipping file ./spectrochempy/examples/processing/nmr/plot_processing_nmr.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 128
f"{x.m:0.1f}",
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:09.804276 #1] INFO -- : Skipping file ./spectrochempy/examples/processing/nmr/plot_processing_cp_nmr.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 82
print(f"position of the peaks : {peaks.x.data}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:09.840852 #1] INFO -- : Skipping file ./spectrochempy/examples/core/b_units/units.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 104
print(f"initial quantity: c = {c}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:09.865034 #1] INFO -- : Skipping file ./spectrochempy/examples/core/c_importer/plot_generic_read.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 66
print(f"{nd.name} : {nd.shape}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.221680 #1] INFO -- : Skipping file ./spectrochempy/ipython/magics.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 102
f"Cannot find any project with name `{proj}` in the namespace."
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.232666 #1] INFO -- : Skipping file ./spectrochempy/utils/objects.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 21
raise AttributeError(key) from e
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.233383 #1] INFO -- : Skipping file ./spectrochempy/utils/misc.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 249
f"something wrong: cannot interpret `{select}` for hypercomplex (quaternion) data!"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.300742 #1] INFO -- : Skipping file ./spectrochempy/utils/system.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 22
return f"{get_user()}@{get_node()}"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.312144 #1] INFO -- : Skipping file ./spectrochempy/utils/optional.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 28
def get_module_version(module: types.ModuleType) -> str:
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.313020 #1] INFO -- : Skipping file ./spectrochempy/utils/file.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 62
return f"[{c.lower()}{c.upper()}]" if c.isalpha() else c
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.323572 #1] INFO -- : Skipping file ./spectrochempy/utils/timeutils.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 19
self.readout = f"Elapsed Time for {self.msg}: {self.time:.6f} seconds\n"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.324294 #1] INFO -- : Skipping file ./spectrochempy/utils/docstrings.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 87
k.strip("*"): f"{k.strip()} : {v.strip()}"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.334421 #1] INFO -- : Skipping file ./spectrochempy/utils/warnings.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 15
expected_warning: type[Warning] | bool | None = Warning,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.335747 #1] INFO -- : Skipping file ./spectrochempy/utils/decorators.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 61
def deprecated(name=None, *, kind="method", replace="", removed=None, extra_msg=""):
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.366886 #1] INFO -- : Skipping file ./spectrochempy/utils/citation.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 76
raise AttributeError(f"`{key}` attribute not found in the `Citation` object.")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.377772 #1] INFO -- : Skipping file ./spectrochempy/utils/coordrange.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 23
def __init__(self, *ranges, reversed=False):
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.392576 #1] INFO -- : Skipping file ./spectrochempy/utils/plots.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 305
return getattr(dataset, f"plot_{type}")(*args, method=method, **kwargs)
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.403893 #1] INFO -- : Skipping file ./spectrochempy/utils/jsonutils.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 89
val = getattr(byte_obj, f"_{name}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.414982 #1] INFO -- : Skipping file ./spectrochempy/utils/traits.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 82
**kwargs,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.416292 #1] INFO -- : Skipping file ./spectrochempy/utils/testing.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 135
sattr = getattr(this, f"_{attr}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.427056 #1] INFO -- : Skipping file ./spectrochempy/utils/exceptions.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 87
f"To use `{caller}` , the method `apply` of model `{model}`"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.437803 #1] INFO -- : Skipping file ./spectrochempy/utils/baseconfigurable.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 89
*,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.455806 #1] INFO -- : Skipping file ./spectrochempy/utils/datetimeutils.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 121
label = f"{time_units} since {str(acquisition_date).replace('T',' ')}"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.466766 #1] INFO -- : Skipping file ./spectrochempy/utils/print_versions.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 60
("OS", f"{sysname}"),
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.477905 #1] INFO -- : Skipping file ./spectrochempy/application/datadir.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 62
strg = f"{self.path.name}\n" # os.path.basename(self.path) + "\n"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.488412 #1] INFO -- : Skipping file ./spectrochempy/application/application.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 146
right = f"2014-{current_year}"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.503472 #1] INFO -- : Skipping file ./spectrochempy/application/plot_preferences.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 1018
c = [f"C{i}" for i in range(10)]
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.525555 #1] INFO -- : Skipping file ./spectrochempy/application/_check_update.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 79
fil.write_text(f"{date.isoformat(date.today())}%%DISPLAYED%%{message}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.570159 #1] INFO -- : Skipping file ./spectrochempy/analysis/baseline/baseline.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 272
**kwargs,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.594817 #1] INFO -- : Skipping file ./spectrochempy/analysis/kinetic/kineticutilities.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 84
f'Species "{s}" in equation "{eq}" is not listed in species\n'
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.604415 #1] INFO -- : Skipping file ./spectrochempy/analysis/_base/_analysisbase.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 77
*,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.615519 #1] INFO -- : Skipping file ./spectrochempy/analysis/crossdecomposition/pls.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 90
*,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.630399 #1] INFO -- : Skipping file ./spectrochempy/analysis/peakfinding/peakfinding.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 339
out.history = f"find_peaks(): {len(peaks)} peak(s) found"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.651915 #1] INFO -- : Skipping file ./spectrochempy/analysis/curvefitting/_parameters.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 76
raise KeyError(f"parameter `{key}` is not found")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.672457 #1] INFO -- : Skipping file ./spectrochempy/analysis/curvefitting/optimize.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 109
*,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.709986 #1] INFO -- : Skipping file ./spectrochempy/analysis/integration/integrate.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 54
f"Integration of NDDataset '{dataset.name}' along dim: '{dim}'."
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.721705 #1] INFO -- : Skipping file ./spectrochempy/analysis/decomposition/nmf.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 172
*,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.731450 #1] INFO -- : Skipping file ./spectrochempy/analysis/decomposition/svd.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 118
*,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.733298 #1] INFO -- : Skipping file ./spectrochempy/analysis/decomposition/mcrals.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 491
log_level=logging.WARNING,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.744091 #1] INFO -- : Skipping file ./spectrochempy/analysis/decomposition/efa.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 89
*,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.744612 #1] INFO -- : Skipping file ./spectrochempy/analysis/decomposition/fast_ica.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 188
*,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.755557 #1] INFO -- : Skipping file ./spectrochempy/analysis/decomposition/pca.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 171
*,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.765974 #1] INFO -- : Skipping file ./spectrochempy/analysis/decomposition/simplisma.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 97
log_level="WARNING",
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.767188 #1] INFO -- : Skipping file ./spectrochempy/analysis/decomposition/iris.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 215
f"Kernel type `{K.lower()}` is not implemented"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.788560 #1] INFO -- : Skipping file ./spectrochempy/processing/fft/phasing.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 33
axis, dim = dataset.get_axis(**kwargs, negative_axis=True)
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.804562 #1] INFO -- : Skipping file ./spectrochempy/processing/fft/zero_filling.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 27
axis, dim = dataset.get_axis(**kwargs, negative_axis=True)
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.815877 #1] INFO -- : Skipping file ./spectrochempy/processing/fft/apodization.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 52
axis, dim = dataset.get_axis(**kwargs, negative_axis=True)
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.827750 #1] INFO -- : Skipping file ./spectrochempy/processing/fft/fft.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 462
f"{encoding} not yet implemented. We recommend you to put an issue on "
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.871025 #1] INFO -- : Skipping file ./spectrochempy/processing/transformation/concatenate.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 110
f"Units of the data are {[str(u) for u in units]}. The datasets can't be concatenated"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.899114 #1] INFO -- : Skipping file ./spectrochempy/processing/transformation/autosub.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 21
dataset, ref, *ranges, dim="x", method="vardiff", return_coefs=False, inplace=False
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.920614 #1] INFO -- : Skipping file ./spectrochempy/processing/alignement/align.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 161
f"Bad object(s) found: {object}. Note that only NDDataset "
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.931720 #1] INFO -- : Skipping file ./spectrochempy/processing/filter/denoise.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 66
f"Number of components selected for reconstruction: {pca.n_components} "
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.932303 #1] INFO -- : Skipping file ./spectrochempy/processing/filter/filter.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 159
**kwargs,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.968150 #1] INFO -- : Skipping file ./spectrochempy/core/writers/write_csv.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 87
title_1 += f" / {dataset.coordset[-1].units:K}"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.980870 #1] INFO -- : Skipping file ./spectrochempy/core/writers/exporter.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 58
write_ = getattr(self, f"_write_{protocol}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:10.992494 #1] INFO -- : Skipping file ./spectrochempy/core/writers/write_jcamp.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 66
fid.write(f"##TITLE={dataset.name}\n")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.020040 #1] INFO -- : Skipping file ./spectrochempy/core/project/project.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 86
def __init__(self, *args, argnames=None, name=None, **meta):
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.030985 #1] INFO -- : Skipping file ./spectrochempy/core/plotters/multiplot.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 121
**kwargs,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.033356 #1] INFO -- : Skipping file ./spectrochempy/core/plotters/plot2d.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 644
line.set_label(f"{ydata[i]}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.066362 #1] INFO -- : Skipping file ./spectrochempy/core/plotters/plot1d.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 155
**kwargs,
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.069526 #1] INFO -- : Skipping file ./spectrochempy/core/readers/read_matlab.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 117
f"The mat file contains an array of strings named '{name}' which will not be converted to NDDataset"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.080844 #1] INFO -- : Skipping file ./spectrochempy/core/readers/importer.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 142
raise TypeError(f"Filetype `{key}` is unknown in spectrochempy")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.083144 #1] INFO -- : Skipping file ./spectrochempy/core/readers/read_quadera.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 157
dataset.history = f"Imported from Quadera asc file {filename}"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.093014 #1] INFO -- : Skipping file ./spectrochempy/core/readers/read_omnic.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 506
"description", f"Omnic title: {spg_title}\nOmnic " f"filename: {filename}"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.104382 #1] INFO -- : Skipping file ./spectrochempy/core/readers/read_wire.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 211
f"Map area type {self._meta.map_area_type.name} not implemented yet!"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.106175 #1] INFO -- : Skipping file ./spectrochempy/core/readers/read_topspin.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 748
f = path / f"{typ}{i}"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.115585 #1] INFO -- : Skipping file ./spectrochempy/core/readers/read_csv.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 180
f"Sorry, but reading a csv file with '{origin}' origin is not implemented. "
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.135476 #1] INFO -- : Skipping file ./spectrochempy/core/readers/read_jcamp.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 250
f"##YUNITS should be the same for all spectra (check spectrum n°{i + 1}"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.148810 #1] INFO -- : Skipping file ./spectrochempy/core/readers/read_opus.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 150
f"{filename} is not an Absorbance spectrum. It cannot be read with the "
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.167052 #1] INFO -- : Skipping file ./spectrochempy/core/readers/read_spc.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 96
f"The version {Fversn} is not yet supported. "
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.178173 #1] INFO -- : Skipping file ./spectrochempy/core/readers/read_labspec.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 99
key = f"{key} {i}"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.194413 #1] INFO -- : Skipping file ./spectrochempy/core/readers/download.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 97
f"https://webbook.nist.gov/cgi/cbook.cgi?JCAMP=C{CAS}&Index={i}&Type=IR"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.245531 #1] INFO -- : Skipping file ./spectrochempy/core/dataset/coord.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 27
from spectrochempy.utils.print import colored_output
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.254492 #1] INFO -- : Skipping file ./spectrochempy/core/dataset/baseobjects/meta.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 322
def permute(self, *dims, inplace=True):
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.256589 #1] INFO -- : Skipping file ./spectrochempy/core/dataset/baseobjects/ndcomplex.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 30
from spectrochempy.utils.print import insert_masked_print
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.267771 #1] INFO -- : Skipping file ./spectrochempy/core/dataset/baseobjects/ndarray.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 55
from spectrochempy.utils.print import (
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.279136 #1] INFO -- : Skipping file ./spectrochempy/core/dataset/nddataset.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 35
from spectrochempy.utils.print import colored_output
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.294468 #1] INFO -- : Skipping file ./spectrochempy/core/dataset/coordset.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 35
from spectrochempy.utils.print import colored_output, convert_to_html
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.303691 #1] INFO -- : Skipping file ./spectrochempy/core/dataset/arraymixins/ndmath.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 143
new.history = f"Created using method : {method}" # (args:{argpos},
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.305450 #1] INFO -- : Skipping file ./spectrochempy/core/dataset/arraymixins/ndio.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 87
return [f"SpectroChemPy {klass} file (*{SCPY_SUFFIX[klass]})"]
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.318362 #1] INFO -- : Skipping file ./spectrochempy/core/dataset/arraymixins/ndplot.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 51
res = getattr(self.parent, f"{self.name}_{key}")
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.325410 #1] INFO -- : Skipping file ./spectrochempy/core/units/__init__.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 40
f"Warning: current pint version is {__version__}. It might not be supported by SpectroChemPy in the future.\n"
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.368844 #1] INFO -- : Skipping file ./spectrochempy/widgets/baselinecorrector.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 161
getattr(self, f"_{control}").observe(
^
SyntaxError: invalid syntax
I, [2024-05-04T04:13:11.369104 #1] INFO -- : Skipping file setup.py due to exception (CC::Engine::Analyzers::ParserError): `python2 /usr/src/app/lib/cc/engine/analyzers/python/parser.py` exited with code 1:
Traceback (most recent call last):
File "/usr/src/app/lib/cc/engine/analyzers/python/parser.py", line 51, in <module>
print(json.dumps(to_json(ast.parse(source))))
File "/usr/local/python2/lib/python2.7/ast.py", line 37, in parse
return compile(source, filename, mode, PyCF_ONLY_AST)
File "<unknown>", line 46
f"Can't find the stylesheets from SpectroChemPy {str(stylesheets)}.\n"
^
SyntaxError: invalid syntax
|
Arnaud TRAVERT authored 20e007f1