template_examples/csvs/ctdna_template__ctDNA.csv
"#title","Metadata file for ctdna assay"
"#preamble","Protocol identifier","test_prism_trial_id"
"#preamble","Batch id","test_batch"
"#preamble","Assay creator","Broad"
"#preamble","Summary plots","summary_plot.pdf"
"#skip","Samples"
"#header","Cimac id","Demultiplexed bam","Demultiplexed bam index","Genome-wide plots","Bias qc plots","Fraction cna subclonal","Fraction genome subclonal","Gc map correction mad","Optimal solution","Other solutions","Tumor ploidy","Subclone fraction","Tumor fraction","Comments"
"#data","CTTTPP111.00","CTTTPP111_00.bam","CTTTPP111_00.bai","CTTTPP111.00/allGenomeWidePlots.pdf","CTTTPP111.00/bias.pdf","0.1","0.2","0.04","CTTTPP111.00/optimalSolution.zip","CTTTPP111.00/outSolutions.zip","2.599","0.15","0.25"
"#data","CTTTPP121.00","CTTTPP121_00.bam","CTTTPP121_00.bai","CTTTPP121.00/allGenomeWidePlots.pdf","CTTTPP121.00/bias.pdf","0.2","0.3","0.05","CTTTPP121.00/optimalSolution.zip","CTTTPP121.00/outSolutions.zip","2.699","0.16","0.26","note about sample 2"