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docs/scripts/hoover_pipeline.html

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<h1 id="NAME">NAME</h1>

<pre><code>    hoover_pipeline.pl</code></pre>

<h1 id="SYNOPSIS">SYNOPSIS</h1>

<pre><code>    hoover_pipeline.pl {-url &lt;url&gt; | -reg_conf &lt;reg_conf&gt; -reg_alias &lt;reg_alias&gt;} [ { -before_datetime &lt;datetime&gt; | -days_ago &lt;days_ago&gt; } ]</code></pre>

<h1 id="DESCRIPTION">DESCRIPTION</h1>

<pre><code>    hoover_pipeline.pl is a script used to remove old &#39;DONE&#39; jobs from a continuously running pipeline database</code></pre>

<h1 id="USAGE-EXAMPLES">USAGE EXAMPLES</h1>

<pre><code>        # delete all jobs that have been &#39;DONE&#39; for at least a week (default threshold) :

    hoover_pipeline.pl -url &quot;mysql://ensadmin:${ENSADMIN_PSW}@localhost:3306/lg4_long_mult&quot;


        # delete all jobs that have been &#39;DONE&#39; for at least a given number of days

    hoover_pipeline.pl -url &quot;mysql://ensadmin:${ENSADMIN_PSW}@localhost:3306/lg4_long_mult&quot; -days_ago 3


        # delete all jobs &#39;DONE&#39; before a specific datetime:

    hoover_pipeline.pl -url &quot;mysql://ensadmin:${ENSADMIN_PSW}@localhost:3306/lg4_long_mult&quot; -before_datetime &quot;2013-02-14 15:42:50&quot;</code></pre>

<h1 id="OPTIONS">OPTIONS</h1>

<pre><code>    -reg_conf &lt;path&gt;          : path to a Registry configuration file
    -reg_type &lt;string&gt;        : type of the registry entry (&#39;hive&#39;, &#39;core&#39;, &#39;compara&#39;, etc - defaults to &#39;hive&#39;)
    -reg_alias &lt;string&gt;       : species/alias name for the Hive DBAdaptor
    -url &lt;url string&gt;         : url defining where hive database is located
    -nosqlvc &lt;0|1&gt;            : skip sql version check if 1
    -before_datetime &lt;string&gt; : delete jobs &#39;DONE&#39; before a specific time
    -days_ago &lt;num&gt;           : delete jobs that have been &#39;DONE&#39; for at least &lt;num&gt; days
    -h | -help                : show this help message</code></pre>

<h1 id="LICENSE">LICENSE</h1>

<pre><code>    Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
    Copyright [2016-2021] EMBL-European Bioinformatics Institute

    Licensed under the Apache License, Version 2.0 (the &quot;License&quot;); you may not use this file except in compliance with the License.
    You may obtain a copy of the License at

         http://www.apache.org/licenses/LICENSE-2.0

    Unless required by applicable law or agreed to in writing, software distributed under the License
    is distributed on an &quot;AS IS&quot; BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
    See the License for the specific language governing permissions and limitations under the License.</code></pre>

<h1 id="CONTACT">CONTACT</h1>

<pre><code>    Please subscribe to the Hive mailing list:  http://listserver.ebi.ac.uk/mailman/listinfo/ehive-users  to discuss Hive-related questions or to be notified of our updates</code></pre>


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