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# TODO: This needs checking - is the logic still the same as for the case above?
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# # TODO - determine whether this should raise an exception or not, or even log a warning
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:return: The mongoengine model. TODO: Note that the tool version is currently incorrect (0.0.0)
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# TODO: Need to implement alignment nodes that live inside plates
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# TODO: Check that the plate value is valid
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# TODO: This sets the default connection of mongoengine, but seems to be a bit of a hack
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# TODO MPN: I removed elements with value None but I am not
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# TODO: This loop over plates is probably not correct:
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# TODO: We should also be checking that the plate is defined over all of the values of the parent plate
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# TODO: is this needed now we have a ComponentFilter() tool?
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# TODO: Need to implement alignment nodes that live inside plates
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# TODO: This sub-plate selection is deprecated
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# TODO from niall: Possibly unnecessary bug: np.mean([1]) = 1. Suggest (n < 1)
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# TODO: What we actually want to do here is find any parts of the sinks that haven't been calculated,
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calculated_intervals=None, # TODO: probably no point in having the actual calculated intervals here
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