de_sim/simulator.py | 564 | D 1 day | A 99% |
de_sim/simulation_object.py | 426 | C 1 day | A 98% |
de_sim/event_message.py | 208 | A 3 hrs | A 100% |
de_sim/examples/sirs.py | 195 | A 50 mins | A 100% |
de_sim/visualize.py | 179 | A 0 mins | A 100% |
de_sim/event.py | 153 | A 1 hr | A 100% |
de_sim/checkpoint.py | 144 | A 1 hr | A 100% |
de_sim/simulation_metadata.py | 123 | A 0 mins | A 100% |
de_sim/utilities.py | 121 | A 0 mins | A 100% |
de_sim/simulation_config.py | 104 | A 1 hr | A 100% |
de_sim/examples/phold.py | 99 | A 35 mins | A 100% |
docs/conf.py | 99 | A 0 mins |
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de_sim/examples/random_walk.py | 96 | A 0 mins | A 100% |
setup.py | 59 | A 0 mins |
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de_sim/simulation_checkpoint_object.py | 58 | A 0 mins | A 100% |
de_sim/examples/jupyter_examples_for_talk/codehighlighter.js | 57 | A 1 hr |
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de_sim/examples/minimal_simulation.py | 56 | A 0 mins | A 100% |
de_sim/config/core.py | 54 | A 0 mins | A 100% |
de_sim/template_sim_objs.py | 54 | A 0 mins | A 100% |
joss_paper/figures/gen_phold_space_time_plot.py | 42 | A 0 mins |
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de_sim/testing/utilities_for_testing.py | 40 | A 0 mins | B 85% |
de_sim/examples/config/core.py | 33 | A 0 mins | A 91% |
de_sim/testing/example_simulation_objects.py | 27 | A 0 mins | A 100% |
de_sim/testing/mock_simulation_object.py | 26 | A 0 mins | A 100% |
de_sim/errors.py | 20 | A 0 mins | A 100% |
de_sim/__init__.py | 12 | A 0 mins | A 100% |
de_sim/testing/some_message_types.py | 11 | A 0 mins | A 100% |
de_sim/examples/debug_logs.py | 10 | A 0 mins | A 100% |
de_sim/_version.py | 1 | A 0 mins | A 100% |
de_sim/config/__init__.py | 1 | A 0 mins | A 100% |
de_sim/examples/config/__init__.py | 0 | A 0 mins | F 0% |
de_sim/testing/__init__.py | 0 | A 0 mins | F 0% |
de_sim/examples/__init__.py | 0 | A 0 mins | F 0% |
joss_paper/figures/comparison.docx | |
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joss_paper/README.txt | |
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de_sim/examples/jupyter_examples_for_talk/README.txt | |
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de_sim/examples/jupyter_examples_for_talk/gray_horiz_line.svg | |
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.karr_lab_build_utils.yml | |
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docs/installation.rst | |
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de_sim/examples/jupyter_examples_for_talk/1. DE-Sim tutorial.ipynb | |
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joss_paper/figures/comparison.pdf | |
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docs/getting-started.rst | |
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de_sim/examples/jupyter_examples/3. Ordering simultaneous events in DE-Sim.ipynb | |
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LICENSE | |
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CODE_OF_CONDUCT.md | |
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joss_paper/paper.bib | |
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docs/performance.rst | |
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docs/references.bib | |
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de_sim/examples/jupyter_examples/2. An epidemic model using DE-Sim.ipynb | |
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