KarrLab/obj_tables

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examples/sbtab/SBtab.svg

Summary

Maintainability
Test Coverage
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<polygon fill="none" stroke="#000000" points="208.5,-9578 208.5,-9603 252.5,-9603 252.5,-9578 208.5,-9578"/>
<text text-anchor="start" x="216.5" y="-9586.8" font-family="Times,serif" font-size="14.00" fill="#000000">Float</text>
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<text text-anchor="start" x="134.5" y="-9562.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">i_d</text>
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<text text-anchor="start" x="213.5" y="-9561.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
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<text text-anchor="start" x="130" y="-9537.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">state</text>
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<polygon fill="none" stroke="#000000" points="208.5,-9528 208.5,-9553 252.5,-9553 252.5,-9528 208.5,-9528"/>
<text text-anchor="start" x="213.5" y="-9536.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#ebffff" stroke="transparent" points="79.5,-9503 79.5,-9528 208.5,-9528 208.5,-9503 79.5,-9503"/>
<polygon fill="none" stroke="#000000" points="79.5,-9503 79.5,-9528 208.5,-9528 208.5,-9503 79.5,-9503"/>
<text text-anchor="start" x="110" y="-9512.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">target_gene</text>
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<polygon fill="none" stroke="#000000" points="208.5,-9503 208.5,-9528 252.5,-9528 252.5,-9503 208.5,-9503"/>
<text text-anchor="start" x="213.5" y="-9511.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#bfffff" stroke="transparent" points="79.5,-9478 79.5,-9503 208.5,-9503 208.5,-9478 79.5,-9478"/>
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<text text-anchor="start" x="103" y="-9487.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">target_operon</text>
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<text text-anchor="start" x="213.5" y="-9486.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
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<text text-anchor="start" x="95.5" y="-9462.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">target_promoter</text>
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<text text-anchor="start" x="213.5" y="-9461.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#bfffff" stroke="transparent" points="79.5,-9428 79.5,-9453 208.5,-9453 208.5,-9428 79.5,-9428"/>
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<text text-anchor="start" x="114.5" y="-9437.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">identifiers</text>
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<text text-anchor="start" x="213.5" y="-9436.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
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<g id="node18" class="node">
<title>Relation</title>
<polygon fill="#ff8a5b" stroke="transparent" points="73.5,-10160 73.5,-10190 257.5,-10190 257.5,-10160 73.5,-10160"/>
<polygon fill="none" stroke="#000000" points="73.5,-10160 73.5,-10190 257.5,-10190 257.5,-10160 73.5,-10160"/>
<text text-anchor="start" x="132.5" y="-10171.6" font-family="Times,serif" font-weight="bold" font-size="18.00" fill="#000000">Relation</text>
<polygon fill="#bfffff" stroke="transparent" points="73.5,-10135 73.5,-10160 201.5,-10160 201.5,-10135 73.5,-10135"/>
<polygon fill="none" stroke="#000000" points="73.5,-10135 73.5,-10160 201.5,-10160 201.5,-10135 73.5,-10135"/>
<text text-anchor="start" x="110" y="-10144.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">comment</text>
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<text text-anchor="start" x="212.5" y="-10143.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
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<polygon fill="none" stroke="#000000" points="73.5,-10110 73.5,-10135 201.5,-10135 201.5,-10110 73.5,-10110"/>
<text text-anchor="start" x="90.5" y="-10119.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">reference_name</text>
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<polygon fill="none" stroke="#000000" points="201.5,-10110 201.5,-10135 257.5,-10135 257.5,-10110 201.5,-10110"/>
<text text-anchor="start" x="212.5" y="-10118.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#bfffff" stroke="transparent" points="73.5,-10085 73.5,-10110 201.5,-10110 201.5,-10085 73.5,-10085"/>
<polygon fill="none" stroke="#000000" points="73.5,-10085 73.5,-10110 201.5,-10110 201.5,-10085 73.5,-10085"/>
<text text-anchor="start" x="79.5" y="-10094.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">reference_pub_med</text>
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<polygon fill="none" stroke="#000000" points="201.5,-10085 201.5,-10110 257.5,-10110 257.5,-10085 201.5,-10085"/>
<text text-anchor="start" x="212.5" y="-10093.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#ebffff" stroke="transparent" points="73.5,-10060 73.5,-10085 201.5,-10085 201.5,-10060 73.5,-10060"/>
<polygon fill="none" stroke="#000000" points="73.5,-10060 73.5,-10085 201.5,-10085 201.5,-10060 73.5,-10060"/>
<text text-anchor="start" x="91" y="-10069.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">reference_d_o_i</text>
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<polygon fill="none" stroke="#000000" points="201.5,-10060 201.5,-10085 257.5,-10085 257.5,-10060 201.5,-10060"/>
<text text-anchor="start" x="212.5" y="-10068.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#bfffff" stroke="transparent" points="73.5,-10035 73.5,-10060 201.5,-10060 201.5,-10035 73.5,-10035"/>
<polygon fill="none" stroke="#000000" points="73.5,-10035 73.5,-10060 201.5,-10060 201.5,-10035 73.5,-10035"/>
<text text-anchor="start" x="105" y="-10044.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">description</text>
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<polygon fill="none" stroke="#000000" points="201.5,-10035 201.5,-10060 257.5,-10060 257.5,-10035 201.5,-10035"/>
<text text-anchor="start" x="212.5" y="-10043.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#ebffff" stroke="transparent" points="73.5,-10010 73.5,-10035 201.5,-10035 201.5,-10010 73.5,-10010"/>
<polygon fill="none" stroke="#000000" points="73.5,-10010 73.5,-10035 201.5,-10035 201.5,-10010 73.5,-10010"/>
<text text-anchor="start" x="128" y="-10019.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">i_d</text>
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<polygon fill="none" stroke="#000000" points="201.5,-10010 201.5,-10035 257.5,-10035 257.5,-10010 201.5,-10010"/>
<text text-anchor="start" x="212.5" y="-10018.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#bfffff" stroke="transparent" points="73.5,-9985 73.5,-10010 201.5,-10010 201.5,-9985 73.5,-9985"/>
<polygon fill="none" stroke="#000000" points="73.5,-9985 73.5,-10010 201.5,-10010 201.5,-9985 73.5,-9985"/>
<text text-anchor="start" x="101.5" y="-9994.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">from_object</text>
<polygon fill="#bfffff" stroke="transparent" points="201.5,-9985 201.5,-10010 257.5,-10010 257.5,-9985 201.5,-9985"/>
<polygon fill="none" stroke="#000000" points="201.5,-9985 201.5,-10010 257.5,-10010 257.5,-9985 201.5,-9985"/>
<text text-anchor="start" x="212.5" y="-9993.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#ebffff" stroke="transparent" points="73.5,-9960 73.5,-9985 201.5,-9985 201.5,-9960 73.5,-9960"/>
<polygon fill="none" stroke="#000000" points="73.5,-9960 73.5,-9985 201.5,-9985 201.5,-9960 73.5,-9960"/>
<text text-anchor="start" x="110.5" y="-9969.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">to_object</text>
<polygon fill="#ebffff" stroke="transparent" points="201.5,-9960 201.5,-9985 257.5,-9985 257.5,-9960 201.5,-9960"/>
<polygon fill="none" stroke="#000000" points="201.5,-9960 201.5,-9985 257.5,-9985 257.5,-9960 201.5,-9960"/>
<text text-anchor="start" x="212.5" y="-9968.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#bfffff" stroke="transparent" points="73.5,-9935 73.5,-9960 201.5,-9960 201.5,-9935 73.5,-9935"/>
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<text text-anchor="start" x="98" y="-9944.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">is_symmetric</text>
<polygon fill="#bfffff" stroke="transparent" points="201.5,-9935 201.5,-9960 257.5,-9960 257.5,-9935 201.5,-9935"/>
<polygon fill="none" stroke="#000000" points="201.5,-9935 201.5,-9960 257.5,-9960 257.5,-9935 201.5,-9935"/>
<text text-anchor="start" x="206.5" y="-9943.8" font-family="Times,serif" font-size="14.00" fill="#000000">Boolean</text>
<polygon fill="#ebffff" stroke="transparent" points="73.5,-9910 73.5,-9935 201.5,-9935 201.5,-9910 73.5,-9910"/>
<polygon fill="none" stroke="#000000" points="73.5,-9910 73.5,-9935 201.5,-9935 201.5,-9910 73.5,-9910"/>
<text text-anchor="start" x="78.5" y="-9919.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">value_quantity_type</text>
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<polygon fill="none" stroke="#000000" points="201.5,-9910 201.5,-9935 257.5,-9935 257.5,-9910 201.5,-9910"/>
<text text-anchor="start" x="215.5" y="-9918.8" font-family="Times,serif" font-size="14.00" fill="#000000">Float</text>
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<g id="node19" class="node">
<title>Relationship</title>
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<polygon fill="none" stroke="#000000" points="93.5,-10391 93.5,-10421 238.5,-10421 238.5,-10391 93.5,-10391"/>
<text text-anchor="start" x="117.5" y="-10402.6" font-family="Times,serif" font-weight="bold" font-size="18.00" fill="#000000">Relationship</text>
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<polygon fill="none" stroke="#000000" points="93.5,-10366 93.5,-10391 182.5,-10391 182.5,-10366 93.5,-10366"/>
<text text-anchor="start" x="128.5" y="-10375.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">i_d</text>
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<polygon fill="none" stroke="#000000" points="182.5,-10366 182.5,-10391 238.5,-10391 238.5,-10366 182.5,-10366"/>
<text text-anchor="start" x="193.5" y="-10374.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#ebffff" stroke="transparent" points="93.5,-10341 93.5,-10366 182.5,-10366 182.5,-10341 93.5,-10341"/>
<polygon fill="none" stroke="#000000" points="93.5,-10341 93.5,-10366 182.5,-10366 182.5,-10341 93.5,-10341"/>
<text text-anchor="start" x="102" y="-10350.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">from_object</text>
<polygon fill="#ebffff" stroke="transparent" points="182.5,-10341 182.5,-10366 238.5,-10366 238.5,-10341 182.5,-10341"/>
<polygon fill="none" stroke="#000000" points="182.5,-10341 182.5,-10366 238.5,-10366 238.5,-10341 182.5,-10341"/>
<text text-anchor="start" x="193.5" y="-10349.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#bfffff" stroke="transparent" points="93.5,-10316 93.5,-10341 182.5,-10341 182.5,-10316 93.5,-10316"/>
<polygon fill="none" stroke="#000000" points="93.5,-10316 93.5,-10341 182.5,-10341 182.5,-10316 93.5,-10316"/>
<text text-anchor="start" x="111" y="-10325.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">to_object</text>
<polygon fill="#bfffff" stroke="transparent" points="182.5,-10316 182.5,-10341 238.5,-10341 238.5,-10316 182.5,-10316"/>
<polygon fill="none" stroke="#000000" points="182.5,-10316 182.5,-10341 238.5,-10341 238.5,-10316 182.5,-10316"/>
<text text-anchor="start" x="193.5" y="-10324.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#ebffff" stroke="transparent" points="93.5,-10291 93.5,-10316 182.5,-10316 182.5,-10291 93.5,-10291"/>
<polygon fill="none" stroke="#000000" points="93.5,-10291 93.5,-10316 182.5,-10316 182.5,-10291 93.5,-10291"/>
<text text-anchor="start" x="122.5" y="-10300.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">value</text>
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<text text-anchor="start" x="191" y="-10299.8" font-family="Times,serif" font-size="14.00" fill="#000000">Integer</text>
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<polygon fill="none" stroke="#000000" points="93.5,-10266 93.5,-10291 182.5,-10291 182.5,-10266 93.5,-10266"/>
<text text-anchor="start" x="98.5" y="-10275.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">is_symmetric</text>
<polygon fill="#bfffff" stroke="transparent" points="182.5,-10266 182.5,-10291 238.5,-10291 238.5,-10266 182.5,-10266"/>
<polygon fill="none" stroke="#000000" points="182.5,-10266 182.5,-10291 238.5,-10291 238.5,-10266 182.5,-10266"/>
<text text-anchor="start" x="187.5" y="-10274.8" font-family="Times,serif" font-size="14.00" fill="#000000">Boolean</text>
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<polygon fill="none" stroke="#000000" points="93.5,-10241 93.5,-10266 182.5,-10266 182.5,-10241 93.5,-10241"/>
<text text-anchor="start" x="126" y="-10250.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">sign</text>
<polygon fill="#ebffff" stroke="transparent" points="182.5,-10241 182.5,-10266 238.5,-10266 238.5,-10241 182.5,-10241"/>
<polygon fill="none" stroke="#000000" points="182.5,-10241 182.5,-10266 238.5,-10266 238.5,-10241 182.5,-10241"/>
<text text-anchor="start" x="193.5" y="-10249.8" font-family="Times,serif" font-size="14.00" fill="#000000">Enum</text>
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<text text-anchor="start" x="115" y="-10225.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">relation</text>
<polygon fill="#bfffff" stroke="transparent" points="182.5,-10216 182.5,-10241 238.5,-10241 238.5,-10216 182.5,-10216"/>
<polygon fill="none" stroke="#000000" points="182.5,-10216 182.5,-10241 238.5,-10241 238.5,-10216 182.5,-10216"/>
<text text-anchor="start" x="193.5" y="-10224.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
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<!-- SparseMatrix -->
<g id="node20" class="node">
<title>SparseMatrix</title>
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<polygon fill="none" stroke="#000000" points="104.5,-10522 104.5,-10552 227.5,-10552 227.5,-10522 104.5,-10522"/>
<text text-anchor="start" x="112.5" y="-10533.6" font-family="Times,serif" font-weight="bold" font-size="18.00" fill="#000000">SparseMatrix</text>
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<polygon fill="none" stroke="#000000" points="104.5,-10497 104.5,-10522 183.5,-10522 183.5,-10497 104.5,-10497"/>
<text text-anchor="start" x="120" y="-10506.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">row_i_d</text>
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<text text-anchor="start" x="188.5" y="-10505.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
<polygon fill="#ebffff" stroke="transparent" points="104.5,-10472 104.5,-10497 183.5,-10497 183.5,-10472 104.5,-10472"/>
<polygon fill="none" stroke="#000000" points="104.5,-10472 104.5,-10497 183.5,-10497 183.5,-10472 104.5,-10472"/>
<text text-anchor="start" x="109.5" y="-10481.8" font-family="Times,serif" font-weight="bold" font-size="14.00" fill="#000000">column_i_d</text>
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<polygon fill="none" stroke="#000000" points="183.5,-10472 183.5,-10497 227.5,-10497 227.5,-10472 183.5,-10472"/>
<text text-anchor="start" x="188.5" y="-10480.8" font-family="Times,serif" font-size="14.00" fill="#000000">String</text>
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<title>SparseMatrixColumn</title>
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<title>SparseMatrixOrdered</title>
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<title>SparseMatrixRow</title>
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<title>StoichiometricMatrix</title>
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<title>rxnconContingencyList</title>
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