examples/sbtab/ecoli_noor_2016_model.multi.tsv
!!ObjTables objTablesVersion='0.0.8' schema='SBtab' document='E. coli central carbon metabolism - unbalanced kinetic data' type='Data' class='Reaction'
!ID !ReactionFormula !Identifiers:kegg.reaction !IsReversible !Gene !NameForPlots
PTS_RPTSsy D_Glucose + Phosphoenolpyruvate <=> Pyruvate + D_Glucose_6_phosphate RPTSsy TRUE PTS pts
PGI_R02740 D_Glucose_6_phosphate <=> D_Fructose_6_phosphate R02740 TRUE PGI pgi
PFK_R04779 ATP + D_Fructose_6_phosphate <=> ADP + D_Fructose_1_6_bisphosphate R04779 TRUE PFK pfk
ALD_R01070 D_Fructose_1_6_bisphosphate <=> Glycerone_phosphate + D_Glyceraldehyde_3_phosphate R01070 TRUE FBA fba
TIM_R01015 Glycerone_phosphate <=> D_Glyceraldehyde_3_phosphate R01015 TRUE TPI tpi
GAP_R01061 Orthophosphate + NADplus + D_Glyceraldehyde_3_phosphate <=> NADH + _3_Phospho_D_glyceroyl_phosphate R01061 TRUE GAP gap
PGK_R01512 ADP + _3_Phospho_D_glyceroyl_phosphate <=> ATP + _3_Phospho_D_glycerate R01512 TRUE PGK pgk
PGM_R01518 _3_Phospho_D_glycerate <=> _2_Phospho_D_glycerate R01518 TRUE GPM gpm
PGH_R00658 _2_Phospho_D_glycerate <=> Phosphoenolpyruvate R00658 TRUE ENO eno
PYK_R00200 ADP + Phosphoenolpyruvate <=> Pyruvate + ATP R00200 TRUE PYK pyk
PDH_R00209 Pyruvate + NADplus + CoA <=> Acetyl_CoA + NADH + CO2 R00209 TRUE PDH pdh
ZWF_R00835 NADPplus + D_Glucose_6_phosphate <=> NADPH + D_Glucono_1_5_lactone_6_phosphate R00835 TRUE ZWF zwf
GLH_R02035 D_Glucono_1_5_lactone_6_phosphate <=> _6_Phospho_D_gluconate R02035 TRUE PGL pgl
PGD_R01528 _6_Phospho_D_gluconate + NADPplus <=> NADPH + D_Ribulose_5_phosphate + CO2 R01528 TRUE GND gnd
RPI_R01056 D_Ribulose_5_phosphate <=> D_Ribose_5_phosphate R01056 TRUE RPI rpi
RPE_R01529 D_Ribulose_5_phosphate <=> D_Xylulose_5_phosphate R01529 TRUE RPE rpe
TXT_R01641 D_Xylulose_5_phosphate + D_Ribose_5_phosphate <=> D_Glyceraldehyde_3_phosphate + Sedoheptulose_7_phosphate R01641 TRUE TKT1 tkt1
TAL_R08575 D_Glyceraldehyde_3_phosphate + Sedoheptulose_7_phosphate <=> D_Erythrose_4_phosphate + D_Fructose_6_phosphate R08575 TRUE TAL tal
TXT_R01067 D_Erythrose_4_phosphate + D_Xylulose_5_phosphate <=> D_Glyceraldehyde_3_phosphate + D_Fructose_6_phosphate R01067 TRUE TKT2 tkt2
FBP_R00762 D_Fructose_1_6_bisphosphate <=> Orthophosphate + D_Fructose_6_phosphate R00762 TRUE FBP fbp
CSN_R00351 Acetyl_CoA + Oxaloacetate <=> CoA + Citrate R00351 TRUE CSN csn
ACN_R01325 Citrate <=> cis_Aconitate R01325 TRUE ACN1 acn1
ACN_R01900 cis_Aconitate <=> Isocitrate R01900 TRUE ACN2 acn2
ICD_R00709 NADplus + Isocitrate <=> NADH + _2_Oxoglutarate + CO2 R00709 TRUE ICD icd
KGD_R08549 NADplus + _2_Oxoglutarate + CoA <=> NADH + CO2 + Succinyl_CoA R08549 TRUE KGD kgd
SCS_R00405 Orthophosphate + ADP + Succinyl_CoA <=> ATP + CoA + Succinate R00405 TRUE SCS scs
SDH_R02164 Ubiquinone + Succinate <=> Fumarate + Ubiquinol R02164 TRUE SDH sdh
FUM_R01082 Fumarate <=> _S__Malate R01082 TRUE FUM fum
MDH_R00342 _S__Malate + NADplus <=> NADH + Oxaloacetate R00342 TRUE MDH mdh
PPC_R00345 Orthophosphate + Oxaloacetate <=> CO2 + Phosphoenolpyruvate R00345 TRUE PPC ppc
%
!!ObjTables objTablesVersion='0.0.8' schema='SBtab' document='E. coli central carbon metabolism - unbalanced kinetic data' type='Data' class='Compound'
!ID !Name !Identifiers:kegg.compound !IsConstant !NameForPlots
_S__Malate (S)-Malate C00149 FALSE (S)-Malate
Acetyl_CoA Acetyl-CoA C00024 FALSE Acetyl-CoA
Fumarate Fumarate C00122 FALSE Fumarate
cis_Aconitate cis-Aconitate C00417 FALSE cis-Aconitate
_6_Phospho_D_gluconate 6-Phospho-D-gluconate C00345 FALSE 6-Phospho-D-gluconate
Orthophosphate Orthophosphate C00009 TRUE Orthophosphate
Pyruvate Pyruvate C00022 FALSE Pyruvate
NADPplus NADP+ C00006 TRUE NADP+
NADPH NADPH C00005 TRUE NADPH
NADH NADH C00004 TRUE NADH
NADplus NAD+ C00003 TRUE NAD+
ATP ATP C00002 TRUE ATP
H2O H2O C00001 TRUE H2O
_2_Oxoglutarate 2-Oxoglutarate C00026 FALSE 2-Oxoglutarate
Oxaloacetate Oxaloacetate C00036 TRUE Oxaloacetate
Ubiquinone Ubiquinone C00399 TRUE Ubiquinone
D_Erythrose_4_phosphate D-Erythrose 4-phosphate C00279 FALSE D-Erythrose 4-phosphate
Ubiquinol Ubiquinol C00390 TRUE Ubiquinol
ADP ADP C00008 TRUE ADP
Isocitrate Isocitrate C00311 FALSE Isocitrate
D_Ribulose_5_phosphate D-Ribulose 5-phosphate C00199 FALSE D-Ribulose 5-phosphate
D_Xylulose_5_phosphate D-Xylulose 5-phosphate C00231 FALSE D-Xylulose 5-phosphate
D_Glucose_6_phosphate D-Glucose 6-phosphate C00092 TRUE D-Glucose 6-phosphate
_3_Phospho_D_glyceroyl_phosphate 3-Phospho-D-glyceroyl phosphate C00236 FALSE 3-Phospho-D-glyceroyl phosphate
CoA CoA C00010 FALSE CoA
CO2 CO2 C00011 TRUE CO2
D_Ribose_5_phosphate D-Ribose 5-phosphate C00117 FALSE D-Ribose 5-phosphate
Glycerone_phosphate Glycerone phosphate C00111 FALSE Glycerone phosphate
D_Glucose D-Glucose C00031 TRUE D-Glucose
D_Fructose_1_6_bisphosphate "D-Fructose 1,6-bisphosphate" C00354 TRUE "D-Fructose 1,6-bisphosphate"
D_Glyceraldehyde_3_phosphate D-Glyceraldehyde 3-phosphate C00118 TRUE D-Glyceraldehyde 3-phosphate
Phosphoenolpyruvate Phosphoenolpyruvate C00074 TRUE Phosphoenolpyruvate
Citrate Citrate C00158 FALSE Citrate
Succinyl_CoA Succinyl-CoA C00091 FALSE Succinyl-CoA
_3_Phospho_D_glycerate 3-Phospho-D-glycerate C00197 FALSE 3-Phospho-D-glycerate
D_Glucono_1_5_lactone_6_phosphate "D-Glucono-1,5-lactone 6-phosphate" C01236 FALSE "D-Glucono-1,5-lactone 6-phosphate"
D_Fructose_6_phosphate D-Fructose 6-phosphate C00085 TRUE D-Fructose 6-phosphate
_2_Phospho_D_glycerate 2-Phospho-D-glycerate C00631 FALSE 2-Phospho-D-glycerate
Succinate Succinate C00042 FALSE Succinate
Sedoheptulose_7_phosphate Sedoheptulose 7-phosphate C05382 FALSE Sedoheptulose 7-phosphate
%
!!ObjTables objTablesVersion='0.0.8' schema='SBtab' document='E. coli central carbon metabolism - unbalanced kinetic data' type='Data' class='Position' description='Layout'
!Element !PositionX !PositionY
_S__Malate 0.32772 0.095058
Acetyl_CoA 0.359426 0.22902
Fumarate 0.362438 -0.001611
cis_Aconitate 0.561709 0.210402
_6_Phospho_D_gluconate 0.616335 0.956914
Orthophosphate 0.056437 0.637639
Pyruvate 0.352063 0.308997
NADPplus 0.059533 0.388417
NADPH 0.061081 0.44724
NADH 0.059533 0.561789
NADplus 0.057985 0.506062
ATP 0.056437 0.698009
H2O 0.448708 0.128361
_2_Oxoglutarate 0.643751 0.055607
Oxaloacetate 0.355831 0.176347
Ubiquinone 0.331064 -0.009408
D_Erythrose_4_phosphate 0.503642 0.870531
Ubiquinol 0.317132 -0.032627
ADP 0.054889 0.758379
Isocitrate 0.637559 0.137648
D_Ribulose_5_phosphate 0.668449 0.871147
D_Xylulose_5_phosphate 0.60891 0.841377
D_Glucose_6_phosphate 0.351859 0.965424
_3_Phospho_D_glyceroyl_phosphate 0.352021 0.64203
CoA 0.391786 0.278709
CO2 0.544682 0.123717
D_Ribose_5_phosphate 0.613611 0.76147
Glycerone_phosphate 0.267748 0.745939
D_Glucose 0.110615 0.965805
D_Fructose_1_6_bisphosphate 0.351859 0.828211
D_Glyceraldehyde_3_phosphate 0.352021 0.721029
Phosphoenolpyruvate 0.352007 0.406884
Citrate 0.445962 0.220921
Succinyl_CoA 0.586477 -0.018695
_3_Phospho_D_glycerate 0.352021 0.569228
D_Glucono_1_5_lactone_6_phosphate 0.493599 0.982833
D_Fructose_6_phosphate 0.351859 0.895258
_2_Phospho_D_glycerate 0.352021 0.485582
Succinate 0.465736 -0.051202
Sedoheptulose_7_phosphate 0.574673 0.821603
PTS_RPTSsy 0.181365 0.96522
PGI_R02740 0.352063 0.923947
PFK_R04779 0.333521 0.858996
ALD_R01070 0.352021 0.790734
TIM_R01015 0.297009 0.716584
GAP_R01061 0.351954 0.683129
PGK_R01512 0.352471 0.606396
PGM_R01518 0.352021 0.524307
PGH_R00658 0.352007 0.437823
PYK_R00200 0.352063 0.353918
PDH_R00209 0.352021 0.265625
ZWF_R00835 0.428585 0.982833
GLH_R02035 0.584929 0.973545
PGD_R01528 0.651221 0.918706
RPI_R01056 0.663749 0.80064
RPE_R01529 0.637113 0.860179
TXT_R01641 0.501711 0.735972
TAL_R08575 0.566723 0.88656
TXT_R01067 0.426938 0.837812
FBP_R00762 0.372405 0.857241
CSN_R00351 0.392982 0.198019
ACN_R01325 0.505983 0.224334
ACN_R01900 0.61434 0.176347
ICD_R00709 0.645299 0.100497
KGD_R08549 0.62208 0.016908
SCS_R00405 0.535394 -0.037271
SDH_R02164 0.402092 -0.03917
FUM_R01082 0.340351 0.035483
MDH_R00342 0.33416 0.140744
PPC_R00345 0.40095304 0.50690003
_S__Malate 0.32772 0.095058
Acetyl_CoA 0.359426 0.22902
Fumarate 0.362438 -0.001611
cis_Aconitate 0.561709 0.210402
_6_Phospho_D_gluconate 0.616335 0.956914
Orthophosphate 0.056437 0.637639
Pyruvate 0.352063 0.308997
NADPplus 0.059533 0.388417
NADPH 0.061081 0.44724
NADH 0.059533 0.561789
NADplus 0.057985 0.506062
ATP 0.056437 0.698009
H2O 0.448708 0.128361
_2_Oxoglutarate 0.643751 0.055607
Oxaloacetate 0.355831 0.176347
Ubiquinone 0.331064 -0.009408
D_Erythrose_4_phosphate 0.503642 0.870531
Ubiquinol 0.317132 -0.032627
ADP 0.054889 0.758379
Isocitrate 0.637559 0.137648
D_Ribulose_5_phosphate 0.668449 0.871147
D_Xylulose_5_phosphate 0.60891 0.841377
D_Glucose_6_phosphate 0.351859 0.965424
_3_Phospho_D_glyceroyl_phosphate 0.352021 0.64203
CoA 0.391786 0.278709
CO2 0.544682 0.123717
D_Ribose_5_phosphate 0.613611 0.76147
Glycerone_phosphate 0.267748 0.745939
D_Glucose 0.110615 0.965805
D_Fructose_1_6_bisphosphate 0.351859 0.828211
D_Glyceraldehyde_3_phosphate 0.352021 0.721029
Phosphoenolpyruvate 0.352007 0.406884
Citrate 0.445962 0.220921
Succinyl_CoA 0.586477 -0.018695
_3_Phospho_D_glycerate 0.352021 0.569228
D_Glucono_1_5_lactone_6_phosphate 0.493599 0.982833
D_Fructose_6_phosphate 0.351859 0.895258
_2_Phospho_D_glycerate 0.352021 0.485582
Succinate 0.465736 -0.051202
Sedoheptulose_7_phosphate 0.574673 0.821603
PTS_RPTSsy 0.181365 0.96522
PGI_R02740 0.352063 0.923947
PFK_R04779 0.333521 0.858996
ALD_R01070 0.352021 0.790734
TIM_R01015 0.297009 0.716584
GAP_R01061 0.351954 0.683129
PGK_R01512 0.352471 0.606396
PGM_R01518 0.352021 0.524307
PGH_R00658 0.352007 0.437823
PYK_R00200 0.352063 0.353918
PDH_R00209 0.352021 0.265625
ZWF_R00835 0.428585 0.982833
GLH_R02035 0.584929 0.973545
PGD_R01528 0.651221 0.918706
RPI_R01056 0.663749 0.80064
RPE_R01529 0.637113 0.860179
TXT_R01641 0.501711 0.735972
TAL_R08575 0.566723 0.88656
TXT_R01067 0.426938 0.837812
FBP_R00762 0.372405 0.857241
CSN_R00351 0.392982 0.198019
ACN_R01325 0.505983 0.224334
ACN_R01900 0.61434 0.176347
ICD_R00709 0.645299 0.100497
KGD_R08549 0.62208 0.016908
SCS_R00405 0.535394 -0.037271
SDH_R02164 0.402092 -0.03917
FUM_R01082 0.340351 0.035483
MDH_R00342 0.33416 0.140744
PPC_R00345 0.40095304 0.50690003
%
!!ObjTables objTablesVersion='0.0.8' schema='SBtab' document='E. coli central carbon metabolism - unbalanced kinetic data' type='Data' class='Quantity'
!QuantityType !Compound !Compound:Identifiers:kegg.compound !Concentration:Min !Concentration:Max !Reaction !Reaction:Identifiers:kegg.reaction !Value !Unit
equilibrium constant PTS_RPTSsy RPTSsy 57262184 dimensionless
equilibrium constant PGI_R02740 R02740 0.36350845 dimensionless
equilibrium constant PFK_R04779 R04779 1764.8694 dimensionless
equilibrium constant ALD_R01070 R01070 0.1889019 dimensionless
equilibrium constant TIM_R01015 R01015 0.10733371 dimensionless
equilibrium constant GAP_R01061 R01061 0.000351805 dimensionless
equilibrium constant PGK_R01512 R01512 1883.7137 dimensionless
equilibrium constant PGM_R01518 R01518 0.1881272 dimensionless
equilibrium constant PGH_R00658 R00658 5.202263 dimensionless
equilibrium constant PYK_R00200 R00200 22335.814 dimensionless
equilibrium constant PDH_R00209 R00209 1670759.7 dimensionless
equilibrium constant ZWF_R00835 R00835 12.916734 dimensionless
equilibrium constant GLH_R02035 R02035 20744.52 dimensionless
equilibrium constant PGD_R01528 R01528 12.330424 dimensionless
equilibrium constant RPI_R01056 R01056 2.264296 dimensionless
equilibrium constant RPE_R01529 R01529 3.9024941 dimensionless
equilibrium constant TXT_R01641 R01641 4.7316932 dimensionless
equilibrium constant TAL_R08575 R08575 1.3194676 dimensionless
equilibrium constant TXT_R01067 R01067 59.621212 dimensionless
equilibrium constant FBP_R00762 R00762 49007.074 dimensionless
equilibrium constant CSN_R00351 R00351 5416530.1 dimensionless
equilibrium constant ACN_R01325 R01325 0.034861263 dimensionless
equilibrium constant ACN_R01900 R01900 1.3190957 dimensionless
equilibrium constant ICD_R00709 R00709 100.21644 dimensionless
equilibrium constant KGD_R08549 R08549 92567.323 dimensionless
equilibrium constant SCS_R00405 R00405 0.58290232 dimensionless
equilibrium constant SDH_R02164 R02164 6026.7589 dimensionless
equilibrium constant FUM_R01082 R01082 4.0148279 dimensionless
equilibrium constant MDH_R00342 R00342 1.94E-05 dimensionless
equilibrium constant PPC_R00345 R00345 3.72E-07 dimensionless
catalytic rate constant geometric mean PTS_RPTSsy RPTSsy NaN 1/s
catalytic rate constant geometric mean PGI_R02740 R02740 NaN 1/s
catalytic rate constant geometric mean PFK_R04779 R04779 NaN 1/s
catalytic rate constant geometric mean ALD_R01070 R01070 NaN 1/s
catalytic rate constant geometric mean TIM_R01015 R01015 1060.6602 1/s
catalytic rate constant geometric mean GAP_R01061 R01061 172.08719 1/s
catalytic rate constant geometric mean PGK_R01512 R01512 236.52354 1/s
catalytic rate constant geometric mean PGM_R01518 R01518 117.66974 1/s
catalytic rate constant geometric mean PGH_R00658 R00658 NaN 1/s
catalytic rate constant geometric mean PYK_R00200 R00200 NaN 1/s
catalytic rate constant geometric mean PDH_R00209 R00209 1.7083033 1/s
catalytic rate constant geometric mean ZWF_R00835 R00835 315.2047 1/s
catalytic rate constant geometric mean GLH_R02035 R02035 NaN 1/s
catalytic rate constant geometric mean PGD_R01528 R01528 51.87217 1/s
catalytic rate constant geometric mean RPI_R01056 R01056 1128.6376 1/s
catalytic rate constant geometric mean RPE_R01529 R01529 487.01987 1/s
catalytic rate constant geometric mean TXT_R01641 R01641 NaN 1/s
catalytic rate constant geometric mean TAL_R08575 R08575 NaN 1/s
catalytic rate constant geometric mean TXT_R01067 R01067 NaN 1/s
catalytic rate constant geometric mean FBP_R00762 R00762 NaN 1/s
catalytic rate constant geometric mean CSN_R00351 R00351 69.518014 1/s
catalytic rate constant geometric mean ACN_R01325 R01325 NaN 1/s
catalytic rate constant geometric mean ACN_R01900 R01900 NaN 1/s
catalytic rate constant geometric mean ICD_R00709 R00709 56.471232 1/s
catalytic rate constant geometric mean KGD_R08549 R08549 NaN 1/s
catalytic rate constant geometric mean SCS_R00405 R00405 95.468278 1/s
catalytic rate constant geometric mean SDH_R02164 R02164 82.509888 1/s
catalytic rate constant geometric mean FUM_R01082 R01082 217.26756 1/s
catalytic rate constant geometric mean MDH_R00342 R00342 485.6488 1/s
catalytic rate constant geometric mean PPC_R00345 R00345 NaN 1/s
Michaelis constant _S__Malate C00149 FUM_R01082 R01082 0.64666009 mM
Michaelis constant _S__Malate C00149 MDH_R00342 R00342 0.59870169 mM
Michaelis constant Acetyl_CoA C00024 PDH_R00209 R00209 0.030581258 mM
Michaelis constant Acetyl_CoA C00024 CSN_R00351 R00351 0.050864382 mM
Michaelis constant Fumarate C00122 SDH_R02164 R02164 0.10381729 mM
Michaelis constant Fumarate C00122 FUM_R01082 R01082 0.18043722 mM
Michaelis constant cis_Aconitate C00417 ACN_R01325 R01325 0.016657922 mM
Michaelis constant cis_Aconitate C00417 ACN_R01900 R01900 0.016657922 mM
Michaelis constant _6_Phospho_D_gluconate C00345 GLH_R02035 R02035 0.02 mM
Michaelis constant _6_Phospho_D_gluconate C00345 PGD_R01528 R01528 0.017811853 mM
Michaelis constant Orthophosphate C00009 GAP_R01061 R01061 1 mM
Michaelis constant Orthophosphate C00009 FBP_R00762 R00762 NaN mM
Michaelis constant Orthophosphate C00009 SCS_R00405 R00405 1.003992 mM
Michaelis constant Orthophosphate C00009 PPC_R00345 R00345 NaN mM
Michaelis constant Pyruvate C00022 PTS_RPTSsy RPTSsy NaN mM
Michaelis constant Pyruvate C00022 PYK_R00200 R00200 0.31 mM
Michaelis constant Pyruvate C00022 PDH_R00209 R00209 0.01 mM
Michaelis constant NADPplus C00006 ZWF_R00835 R00835 0.007 mM
Michaelis constant NADPplus C00006 PGD_R01528 R01528 0.016784756 mM
Michaelis constant NADPH C00005 ZWF_R00835 R00835 0.007 mM
Michaelis constant NADPH C00005 PGD_R01528 R01528 0.000663325 mM
Michaelis constant NADH C00004 GAP_R01061 R01061 0.059 mM
Michaelis constant NADH C00004 PDH_R00209 R00209 NaN mM
Michaelis constant NADH C00004 ICD_R00709 R00709 NaN mM
Michaelis constant NADH C00004 KGD_R08549 R08549 NaN mM
Michaelis constant NADH C00004 MDH_R00342 R00342 0.027138618 mM
Michaelis constant NADplus C00003 GAP_R01061 R01061 0.09 mM
Michaelis constant NADplus C00003 PDH_R00209 R00209 0.041024383 mM
Michaelis constant NADplus C00003 ICD_R00709 R00709 0.08 mM
Michaelis constant NADplus C00003 KGD_R08549 R08549 NaN mM
Michaelis constant NADplus C00003 MDH_R00342 R00342 0.12812311 mM
Michaelis constant ATP C00002 PFK_R04779 R04779 0.12 mM
Michaelis constant ATP C00002 PGK_R01512 R01512 0.48 mM
Michaelis constant ATP C00002 PYK_R00200 R00200 0.25 mM
Michaelis constant ATP C00002 SCS_R00405 R00405 0.090092484 mM
Michaelis constant _2_Oxoglutarate C00026 ICD_R00709 R00709 NaN mM
Michaelis constant _2_Oxoglutarate C00026 KGD_R08549 R08549 4 mM
Michaelis constant Oxaloacetate C00036 CSN_R00351 R00351 0.033920097 mM
Michaelis constant Oxaloacetate C00036 MDH_R00342 R00342 0.034479991 mM
Michaelis constant Oxaloacetate C00036 PPC_R00345 R00345 NaN mM
Michaelis constant Ubiquinone C00399 SDH_R02164 R02164 0.037084298 mM
Michaelis constant D_Erythrose_4_phosphate C00279 TAL_R08575 R08575 0.031862242 mM
Michaelis constant D_Erythrose_4_phosphate C00279 TXT_R01067 R01067 0.36 mM
Michaelis constant Ubiquinol C00390 SDH_R02164 R02164 NaN mM
Michaelis constant ADP C00008 PFK_R04779 R04779 0.82825117 mM
Michaelis constant ADP C00008 PGK_R01512 R01512 0.2 mM
Michaelis constant ADP C00008 PYK_R00200 R00200 0.25 mM
Michaelis constant ADP C00008 SCS_R00405 R00405 0.061357924 mM
Michaelis constant Isocitrate C00311 ACN_R01900 R01900 0.19745878 mM
Michaelis constant Isocitrate C00311 ICD_R00709 R00709 2.4 mM
Michaelis constant D_Ribulose_5_phosphate C00199 PGD_R01528 R01528 0.14142136 mM
Michaelis constant D_Ribulose_5_phosphate C00199 RPI_R01056 R01056 3.1464265 mM
Michaelis constant D_Ribulose_5_phosphate C00199 RPE_R01529 R01529 0.86969557 mM
Michaelis constant D_Xylulose_5_phosphate C00231 RPE_R01529 R01529 NaN mM
Michaelis constant D_Xylulose_5_phosphate C00231 TXT_R01641 R01641 0.49 mM
Michaelis constant D_Xylulose_5_phosphate C00231 TXT_R01067 R01067 0.49 mM
Michaelis constant D_Glucose_6_phosphate C00092 PTS_RPTSsy RPTSsy NaN mM
Michaelis constant D_Glucose_6_phosphate C00092 PGI_R02740 R02740 NaN mM
Michaelis constant D_Glucose_6_phosphate C00092 ZWF_R00835 R00835 0.174 mM
Michaelis constant _3_Phospho_D_glyceroyl_phosphate C00236 GAP_R01061 R01061 0.05 mM
Michaelis constant _3_Phospho_D_glyceroyl_phosphate C00236 PGK_R01512 R01512 0.0018 mM
Michaelis constant CoA C00010 PDH_R00209 R00209 0.003464102 mM
Michaelis constant CoA C00010 CSN_R00351 R00351 NaN mM
Michaelis constant CoA C00010 KGD_R08549 R08549 NaN mM
Michaelis constant CoA C00010 SCS_R00405 R00405 0.086881013 mM
Michaelis constant CO2 C00011 PDH_R00209 R00209 NaN mM
Michaelis constant CO2 C00011 PGD_R01528 R01528 41.231056 mM
Michaelis constant CO2 C00011 ICD_R00709 R00709 NaN mM
Michaelis constant CO2 C00011 KGD_R08549 R08549 NaN mM
Michaelis constant CO2 C00011 PPC_R00345 R00345 0.19 mM
Michaelis constant D_Ribose_5_phosphate C00117 RPI_R01056 R01056 2.2 mM
Michaelis constant D_Ribose_5_phosphate C00117 TXT_R01641 R01641 0.53 mM
Michaelis constant Glycerone_phosphate C00111 ALD_R01070 R01070 0.16124515 mM
Michaelis constant Glycerone_phosphate C00111 TIM_R01015 R01015 1 mM
Michaelis constant D_Glucose C00031 PTS_RPTSsy RPTSsy NaN mM
Michaelis constant D_Fructose_1_6_bisphosphate C00354 PFK_R04779 R04779 NaN mM
Michaelis constant D_Fructose_1_6_bisphosphate C00354 ALD_R01070 R01070 NaN mM
Michaelis constant D_Fructose_1_6_bisphosphate C00354 FBP_R00762 R00762 0.013652535 mM
Michaelis constant D_Glyceraldehyde_3_phosphate C00118 ALD_R01070 R01070 0.13076697 mM
Michaelis constant D_Glyceraldehyde_3_phosphate C00118 TIM_R01015 R01015 1 mM
Michaelis constant D_Glyceraldehyde_3_phosphate C00118 GAP_R01061 R01061 0.21 mM
Michaelis constant D_Glyceraldehyde_3_phosphate C00118 TXT_R01641 R01641 4.9 mM
Michaelis constant D_Glyceraldehyde_3_phosphate C00118 TAL_R08575 R08575 0.084433137 mM
Michaelis constant D_Glyceraldehyde_3_phosphate C00118 TXT_R01067 R01067 4.9 mM
Michaelis constant Phosphoenolpyruvate C00074 PTS_RPTSsy RPTSsy NaN mM
Michaelis constant Phosphoenolpyruvate C00074 PGH_R00658 R00658 0.3 mM
Michaelis constant Phosphoenolpyruvate C00074 PYK_R00200 R00200 0.31 mM
Michaelis constant Phosphoenolpyruvate C00074 PPC_R00345 R00345 0.38431493 mM
Michaelis constant Citrate C00158 CSN_R00351 R00351 0.001 mM
Michaelis constant Citrate C00158 ACN_R01325 R01325 0.73118139 mM
Michaelis constant Succinyl_CoA C00091 KGD_R08549 R08549 0.077459667 mM
Michaelis constant Succinyl_CoA C00091 SCS_R00405 R00405 0.027912311 mM
Michaelis constant _3_Phospho_D_glycerate C00197 PGK_R01512 R01512 0.69 mM
Michaelis constant _3_Phospho_D_glycerate C00197 PGM_R01518 R01518 0.65 mM
Michaelis constant D_Glucono_1_5_lactone_6_phosphate C01236 ZWF_R00835 R00835 0.174 mM
Michaelis constant D_Glucono_1_5_lactone_6_phosphate C01236 GLH_R02035 R02035 0.02 mM
Michaelis constant D_Fructose_6_phosphate C00085 PGI_R02740 R02740 NaN mM
Michaelis constant D_Fructose_6_phosphate C00085 PFK_R04779 R04779 NaN mM
Michaelis constant D_Fructose_6_phosphate C00085 TAL_R08575 R08575 0.49559808 mM
Michaelis constant D_Fructose_6_phosphate C00085 TXT_R01067 R01067 7 mM
Michaelis constant D_Fructose_6_phosphate C00085 FBP_R00762 R00762 NaN mM
Michaelis constant _2_Phospho_D_glycerate C00631 PGM_R01518 R01518 0.041 mM
Michaelis constant _2_Phospho_D_glycerate C00631 PGH_R00658 R00658 0.3 mM
Michaelis constant Succinate C00042 SCS_R00405 R00405 2.2969796 mM
Michaelis constant Succinate C00042 SDH_R02164 R02164 0.11895397 mM
Michaelis constant Sedoheptulose_7_phosphate C05382 TXT_R01641 R01641 4 mM
Michaelis constant Sedoheptulose_7_phosphate C05382 TAL_R08575 R08575 0.28683033 mM
substrate catalytic rate constant PTS_RPTSsy RPTSsy 15 1/s
substrate catalytic rate constant PGI_R02740 R02740 125.62172 1/s
substrate catalytic rate constant PFK_R04779 R04779 41.75 1/s
substrate catalytic rate constant ALD_R01070 R01070 NaN 1/s
substrate catalytic rate constant TIM_R01015 R01015 4500 1/s
substrate catalytic rate constant GAP_R01061 R01061 134 1/s
substrate catalytic rate constant PGK_R01512 R01512 67.158925 1/s
substrate catalytic rate constant PGM_R01518 R01518 530 1/s
substrate catalytic rate constant PGH_R00658 R00658 197.83576 1/s
substrate catalytic rate constant PYK_R00200 R00200 67 1/s
substrate catalytic rate constant PDH_R00209 R00209 37.9 1/s
substrate catalytic rate constant ZWF_R00835 R00835 174 1/s
substrate catalytic rate constant GLH_R02035 R02035 468 1/s
substrate catalytic rate constant PGD_R01528 R01528 27.456347 1/s
substrate catalytic rate constant RPI_R01056 R01056 1405.8805 1/s
substrate catalytic rate constant RPE_R01529 R01529 1300 1/s
substrate catalytic rate constant TXT_R01641 R01641 45 1/s
substrate catalytic rate constant TAL_R08575 R08575 6.44 1/s
substrate catalytic rate constant TXT_R01067 R01067 69 1/s
substrate catalytic rate constant FBP_R00762 R00762 NaN 1/s
substrate catalytic rate constant CSN_R00351 R00351 40.499408 1/s
substrate catalytic rate constant ACN_R01325 R01325 3.3 1/s
substrate catalytic rate constant ACN_R01900 R01900 3.3 1/s
substrate catalytic rate constant ICD_R00709 R00709 106.3 1/s
substrate catalytic rate constant KGD_R08549 R08549 NaN 1/s
substrate catalytic rate constant SCS_R00405 R00405 201 1/s
substrate catalytic rate constant SDH_R02164 R02164 85.572486 1/s
substrate catalytic rate constant FUM_R01082 R01082 409.59643 1/s
substrate catalytic rate constant MDH_R00342 R00342 1034.7807 1/s
substrate catalytic rate constant PPC_R00345 R00345 270 1/s
product catalytic rate constant PTS_RPTSsy RPTSsy NaN 1/s
product catalytic rate constant PGI_R02740 R02740 NaN 1/s
product catalytic rate constant PFK_R04779 R04779 NaN 1/s
product catalytic rate constant ALD_R01070 R01070 NaN 1/s
product catalytic rate constant TIM_R01015 R01015 250 1/s
product catalytic rate constant GAP_R01061 R01061 221 1/s
product catalytic rate constant PGK_R01512 R01512 833 1/s
product catalytic rate constant PGM_R01518 R01518 26.124843 1/s
product catalytic rate constant PGH_R00658 R00658 NaN 1/s
product catalytic rate constant PYK_R00200 R00200 NaN 1/s
product catalytic rate constant PDH_R00209 R00209 0.077 1/s
product catalytic rate constant ZWF_R00835 R00835 571 1/s
product catalytic rate constant GLH_R02035 R02035 NaN 1/s
product catalytic rate constant PGD_R01528 R01528 98 1/s
product catalytic rate constant RPI_R01056 R01056 906.06764 1/s
product catalytic rate constant RPE_R01529 R01529 182.45258 1/s
product catalytic rate constant TXT_R01641 R01641 NaN 1/s
product catalytic rate constant TAL_R08575 R08575 NaN 1/s
product catalytic rate constant TXT_R01067 R01067 NaN 1/s
product catalytic rate constant FBP_R00762 R00762 23.4 1/s
product catalytic rate constant CSN_R00351 R00351 119.32901 1/s
product catalytic rate constant ACN_R01325 R01325 NaN 1/s
product catalytic rate constant ACN_R01900 R01900 NaN 1/s
product catalytic rate constant ICD_R00709 R00709 30 1/s
product catalytic rate constant KGD_R08549 R08549 NaN 1/s
product catalytic rate constant SCS_R00405 R00405 45.344239 1/s
product catalytic rate constant SDH_R02164 R02164 79.556898 1/s
product catalytic rate constant FUM_R01082 R01082 115.24806 1/s
product catalytic rate constant MDH_R00342 R00342 227.92729 1/s
product catalytic rate constant PPC_R00345 R00345 NaN 1/s
molecular mass _S__Malate C00149 134 Da
molecular mass Acetyl_CoA C00024 810 Da
molecular mass Fumarate C00122 116 Da
molecular mass cis_Aconitate C00417 174 Da
molecular mass _6_Phospho_D_gluconate C00345 276 Da
molecular mass Orthophosphate C00009 98 Da
molecular mass Pyruvate C00022 88 Da
molecular mass NADPplus C00006 744 Da
molecular mass NADPH C00005 745 Da
molecular mass NADH C00004 665 Da
molecular mass NADplus C00003 664 Da
molecular mass ATP C00002 507 Da
molecular mass H2O C00001 NaN Da
molecular mass _2_Oxoglutarate C00026 146 Da
molecular mass Oxaloacetate C00036 132 Da
molecular mass Ubiquinone C00399 318 Da
molecular mass D_Erythrose_4_phosphate C00279 200 Da
molecular mass Ubiquinol C00390 320 Da
molecular mass ADP C00008 427 Da
molecular mass Isocitrate C00311 192 Da
molecular mass D_Ribulose_5_phosphate C00199 230 Da
molecular mass D_Xylulose_5_phosphate C00231 230 Da
molecular mass D_Glucose_6_phosphate C00092 260 Da
molecular mass _3_Phospho_D_glyceroyl_phosphate C00236 266 Da
molecular mass CoA C00010 768 Da
molecular mass CO2 C00011 44 Da
molecular mass D_Ribose_5_phosphate C00117 230 Da
molecular mass Glycerone_phosphate C00111 170 Da
molecular mass D_Glucose C00031 180 Da
molecular mass D_Fructose_1_6_bisphosphate C00354 340 Da
molecular mass D_Glyceraldehyde_3_phosphate C00118 170 Da
molecular mass Phosphoenolpyruvate C00074 168 Da
molecular mass Citrate C00158 192 Da
molecular mass Succinyl_CoA C00091 868 Da
molecular mass _3_Phospho_D_glycerate C00197 186 Da
molecular mass D_Glucono_1_5_lactone_6_phosphate C01236 258 Da
molecular mass D_Fructose_6_phosphate C00085 260 Da
molecular mass _2_Phospho_D_glycerate C00631 186 Da
molecular mass Succinate C00042 118 Da
molecular mass Sedoheptulose_7_phosphate C05382 290 Da
protein molecular mass PTS_RPTSsy RPTSsy 255848 Da
protein molecular mass PGI_R02740 R02740 61530 Da
protein molecular mass PFK_R04779 R04779 139360 Da
protein molecular mass ALD_R01070 R01070 39147 Da
protein molecular mass TIM_R01015 R01015 53940 Da
protein molecular mass GAP_R01061 R01061 35530 Da
protein molecular mass PGK_R01512 R01512 41120 Da
protein molecular mass PGM_R01518 R01518 28556 Da
protein molecular mass PGH_R00658 R00658 45650 Da
protein molecular mass PYK_R00200 R00200 50000 Da
protein molecular mass PDH_R00209 R00209 282880 Da
protein molecular mass ZWF_R00835 R00835 55700 Da
protein molecular mass GLH_R02035 R02035 36310 Da
protein molecular mass PGD_R01528 R01528 102960 Da
protein molecular mass RPI_R01056 R01056 19466 Da
protein molecular mass RPE_R01529 R01529 24554 Da
protein molecular mass TXT_R01641 R01641 73043 Da
protein molecular mass TAL_R08575 R08575 35219 Da
protein molecular mass TXT_R01067 R01067 73043 Da
protein molecular mass FBP_R00762 R00762 36834 Da
protein molecular mass CSN_R00351 R00351 96020 Da
protein molecular mass ACN_R01325 R01325 95588 Da
protein molecular mass ACN_R01900 R01900 95588 Da
protein molecular mass ICD_R00709 R00709 45760 Da
protein molecular mass KGD_R08549 R08549 1209180 Da
protein molecular mass SCS_R00405 R00405 71170 Da
protein molecular mass SDH_R02164 R02164 792299 Da
protein molecular mass FUM_R01082 R01082 60000 Da
protein molecular mass MDH_R00342 R00342 32337 Da
protein molecular mass PPC_R00345 R00345 198120 Da
flux PTS_RPTSsy RPTSsy 0.5691 mM/s
flux PGI_R02740 R02740 0.385 mM/s
flux PFK_R04779 R04779 0.4417 mM/s
flux ALD_R01070 R01070 0.44702 mM/s
flux TIM_R01015 R01015 0.4445 mM/s
flux GAP_R01061 R01061 0.9163 mM/s
flux PGK_R01512 R01512 0.8946 mM/s
flux PGM_R01518 R01518 0.8729 mM/s
flux PGH_R00658 R00658 0.91875 mM/s
flux PYK_R00200 R00200 0.1841 mM/s
flux PDH_R00209 R00209 0.3787 mM/s
flux ZWF_R00835 R00835 0.1813 mM/s
flux GLH_R02035 R02035 0.1568 mM/s
flux PGD_R01528 R01528 0.1323 mM/s
flux RPI_R01056 R01056 0.049933333 mM/s
flux RPE_R01529 R01529 0.077233333 mM/s
flux TXT_R01641 R01641 0.0448 mM/s
flux TAL_R08575 R08575 0.0448 mM/s
flux TXT_R01067 R01067 0.0273 mM/s
flux FBP_R00762 R00762 0 mM/s
flux CSN_R00351 R00351 0.154 mM/s
flux ACN_R01325 R01325 0.154 mM/s
flux ACN_R01900 R01900 0.154 mM/s
flux ICD_R00709 R00709 0.154 mM/s
flux KGD_R08549 R08549 0.0924 mM/s
flux SCS_R00405 R00405 0.1673 mM/s
flux SDH_R02164 R02164 0.0924 mM/s
flux FUM_R01082 R01082 0.0924 mM/s
flux MDH_R00342 R00342 0.0602 mM/s
flux PPC_R00345 R00345 -0.2114 mM/s
concentration _S__Malate C00149 0.001 10 mM
concentration Acetyl_CoA C00024 0.001 10 mM
concentration Fumarate C00122 0.001 10 mM
concentration cis_Aconitate C00417 0.001 10 mM
concentration _6_Phospho_D_gluconate C00345 0.001 10 mM
concentration Orthophosphate C00009 10 10 mM
concentration Pyruvate C00022 0.001 10 mM
concentration NADPplus C00006 0.1 0.1 mM
concentration NADPH C00005 0.11389157 0.11389157 mM
concentration NADH C00004 0.02741513 0.02741513 mM
concentration NADplus C00003 1 1 mM
concentration ATP C00002 3.4491395 3.4491395 mM
concentration H2O C00001 1 1 mM
concentration _2_Oxoglutarate C00026 0.001 10 mM
concentration Oxaloacetate C00036 0.001 10 mM
concentration Ubiquinone C00399 0.1 0.1 mM
concentration D_Erythrose_4_phosphate C00279 0.001 10 mM
concentration Ubiquinol C00390 0.1 0.1 mM
concentration ADP C00008 0.60461237 0.60461237 mM
concentration Isocitrate C00311 0.001 10 mM
concentration D_Ribulose_5_phosphate C00199 0.001 10 mM
concentration D_Xylulose_5_phosphate C00231 0.001 10 mM
concentration D_Glucose_6_phosphate C00092 0.001 10 mM
concentration _3_Phospho_D_glyceroyl_phosphate C00236 0.001 10 mM
concentration CoA C00010 1 1 mM
concentration CO2 C00011 0.01 0.01 mM
concentration D_Ribose_5_phosphate C00117 0.001 10 mM
concentration Glycerone_phosphate C00111 0.001 10 mM
concentration D_Glucose C00031 12 12 mM
concentration D_Fructose_1_6_bisphosphate C00354 0.001 10 mM
concentration D_Glyceraldehyde_3_phosphate C00118 0.001 10 mM
concentration Phosphoenolpyruvate C00074 0.001 10 mM
concentration Citrate C00158 0.001 10 mM
concentration Succinyl_CoA C00091 0.001 10 mM
concentration _3_Phospho_D_glycerate C00197 0.001 10 mM
concentration D_Glucono_1_5_lactone_6_phosphate C01236 0.001 10 mM
concentration D_Fructose_6_phosphate C00085 0.001 10 mM
concentration _2_Phospho_D_glycerate C00631 0.001 10 mM
concentration Succinate C00042 0.001 10 mM
concentration Sedoheptulose_7_phosphate C05382 0.001 10 mM
enzyme cost weight PTS_RPTSsy RPTSsy 1.2491113 dimensionless
enzyme cost weight PGI_R02740 R02740 1.2955694 dimensionless
enzyme cost weight PFK_R04779 R04779 0.71548508 dimensionless
enzyme cost weight ALD_R01070 R01070 1.0628853 dimensionless
enzyme cost weight TIM_R01015 R01015 0.53936283 dimensionless
enzyme cost weight GAP_R01061 R01061 0.72266321 dimensionless
enzyme cost weight PGK_R01512 R01512 0.82214409 dimensionless
enzyme cost weight PGM_R01518 R01518 0.58700924 dimensionless
enzyme cost weight PGH_R00658 R00658 0.91068733 dimensionless
enzyme cost weight PYK_R00200 R00200 1 dimensionless
enzyme cost weight PDH_R00209 R00209 2.0415396 dimensionless
enzyme cost weight ZWF_R00835 R00835 1.1355955 dimensionless
enzyme cost weight GLH_R02035 R02035 0.73865573 dimensionless
enzyme cost weight PGD_R01528 R01528 1.0490587 dimensionless
enzyme cost weight RPI_R01056 R01056 0.46277989 dimensionless
enzyme cost weight RPE_R01529 R01529 0.50280989 dimensionless
enzyme cost weight TXT_R01641 R01641 1.5137767 dimensionless
enzyme cost weight TAL_R08575 R08575 0.70310598 dimensionless
enzyme cost weight TXT_R01067 R01067 1.5137767 dimensionless
enzyme cost weight FBP_R00762 R00762 NaN dimensionless
enzyme cost weight CSN_R00351 R00351 1.0058438 dimensionless
enzyme cost weight ACN_R01325 R01325 1.8932241 dimensionless
enzyme cost weight ACN_R01900 R01900 1.8932241 dimensionless
enzyme cost weight ICD_R00709 R00709 0.94526312 dimensionless
enzyme cost weight KGD_R08549 R08549 0.85451871 dimensionless
enzyme cost weight SCS_R00405 R00405 0.82884497 dimensionless
enzyme cost weight SDH_R02164 R02164 1.2922092 dimensionless
enzyme cost weight FUM_R01082 R01082 1.2217818 dimensionless
enzyme cost weight MDH_R00342 R00342 0.64118123 dimensionless
enzyme cost weight PPC_R00345 R00345 1.9865788 dimensionless