KarrLab/obj_tables

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examples/sbtab/ecoli_noor_2016_model.tsv/Position.tsv

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!!ObjTables schema='SBtab' type='Data' tableFormat='row' class='Position' name='Position' date='2020-07-18 12:19:25' objTablesVersion='1.0.5' document='E. coli central carbon metabolism - unbalanced kinetic data'        
!Element    !PositionX    !PositionY
_S__Malate    0.32772    0.095058
Acetyl_CoA    0.359426    0.22902
Fumarate    0.362438    -0.001611
cis_Aconitate    0.561709    0.210402
_6_Phospho_D_gluconate    0.616335    0.956914
Orthophosphate    0.056437    0.637639
Pyruvate    0.352063    0.308997
NADPplus    0.059533    0.388417
NADPH    0.061081    0.44724
NADH    0.059533    0.561789
NADplus    0.057985    0.506062
ATP    0.056437    0.698009
H2O    0.448708    0.128361
_2_Oxoglutarate    0.643751    0.055607
Oxaloacetate    0.355831    0.176347
Ubiquinone    0.331064    -0.009408
D_Erythrose_4_phosphate    0.503642    0.870531
Ubiquinol    0.317132    -0.032627
ADP    0.054889    0.758379
Isocitrate    0.637559    0.137648
D_Ribulose_5_phosphate    0.668449    0.871147
D_Xylulose_5_phosphate    0.60891    0.841377
D_Glucose_6_phosphate    0.351859    0.965424
_3_Phospho_D_glyceroyl_phosphate    0.352021    0.64203
CoA    0.391786    0.278709
CO2    0.544682    0.123717
D_Ribose_5_phosphate    0.613611    0.76147
Glycerone_phosphate    0.267748    0.745939
D_Glucose    0.110615    0.965805
D_Fructose_1_6_bisphosphate    0.351859    0.828211
D_Glyceraldehyde_3_phosphate    0.352021    0.721029
Phosphoenolpyruvate    0.352007    0.406884
Citrate    0.445962    0.220921
Succinyl_CoA    0.586477    -0.018695
_3_Phospho_D_glycerate    0.352021    0.569228
D_Glucono_1_5_lactone_6_phosphate    0.493599    0.982833
D_Fructose_6_phosphate    0.351859    0.895258
_2_Phospho_D_glycerate    0.352021    0.485582
Succinate    0.465736    -0.051202
Sedoheptulose_7_phosphate    0.574673    0.821603
PTS_RPTSsy    0.181365    0.96522
PGI_R02740    0.352063    0.923947
PFK_R04779    0.333521    0.858996
ALD_R01070    0.352021    0.790734
TIM_R01015    0.297009    0.716584
GAP_R01061    0.351954    0.683129
PGK_R01512    0.352471    0.606396
PGM_R01518    0.352021    0.524307
PGH_R00658    0.352007    0.437823
PYK_R00200    0.352063    0.353918
PDH_R00209    0.352021    0.265625
ZWF_R00835    0.428585    0.982833
GLH_R02035    0.584929    0.973545
PGD_R01528    0.651221    0.918706
RPI_R01056    0.663749    0.80064
RPE_R01529    0.637113    0.860179
TXT_R01641    0.501711    0.735972
TAL_R08575    0.566723    0.88656
TXT_R01067    0.426938    0.837812
FBP_R00762    0.372405    0.857241
CSN_R00351    0.392982    0.198019
ACN_R01325    0.505983    0.224334
ACN_R01900    0.61434    0.176347
ICD_R00709    0.645299    0.100497
KGD_R08549    0.62208    0.016908
SCS_R00405    0.535394    -0.037271
SDH_R02164    0.402092    -0.03917
FUM_R01082    0.340351    0.035483
MDH_R00342    0.33416    0.140744
PPC_R00345    0.40095304    0.50690003
_S__Malate    0.32772    0.095058
Acetyl_CoA    0.359426    0.22902
Fumarate    0.362438    -0.001611
cis_Aconitate    0.561709    0.210402
_6_Phospho_D_gluconate    0.616335    0.956914
Orthophosphate    0.056437    0.637639
Pyruvate    0.352063    0.308997
NADPplus    0.059533    0.388417
NADPH    0.061081    0.44724
NADH    0.059533    0.561789
NADplus    0.057985    0.506062
ATP    0.056437    0.698009
H2O    0.448708    0.128361
_2_Oxoglutarate    0.643751    0.055607
Oxaloacetate    0.355831    0.176347
Ubiquinone    0.331064    -0.009408
D_Erythrose_4_phosphate    0.503642    0.870531
Ubiquinol    0.317132    -0.032627
ADP    0.054889    0.758379
Isocitrate    0.637559    0.137648
D_Ribulose_5_phosphate    0.668449    0.871147
D_Xylulose_5_phosphate    0.60891    0.841377
D_Glucose_6_phosphate    0.351859    0.965424
_3_Phospho_D_glyceroyl_phosphate    0.352021    0.64203
CoA    0.391786    0.278709
CO2    0.544682    0.123717
D_Ribose_5_phosphate    0.613611    0.76147
Glycerone_phosphate    0.267748    0.745939
D_Glucose    0.110615    0.965805
D_Fructose_1_6_bisphosphate    0.351859    0.828211
D_Glyceraldehyde_3_phosphate    0.352021    0.721029
Phosphoenolpyruvate    0.352007    0.406884
Citrate    0.445962    0.220921
Succinyl_CoA    0.586477    -0.018695
_3_Phospho_D_glycerate    0.352021    0.569228
D_Glucono_1_5_lactone_6_phosphate    0.493599    0.982833
D_Fructose_6_phosphate    0.351859    0.895258
_2_Phospho_D_glycerate    0.352021    0.485582
Succinate    0.465736    -0.051202
Sedoheptulose_7_phosphate    0.574673    0.821603
PTS_RPTSsy    0.181365    0.96522
PGI_R02740    0.352063    0.923947
PFK_R04779    0.333521    0.858996
ALD_R01070    0.352021    0.790734
TIM_R01015    0.297009    0.716584
GAP_R01061    0.351954    0.683129
PGK_R01512    0.352471    0.606396
PGM_R01518    0.352021    0.524307
PGH_R00658    0.352007    0.437823
PYK_R00200    0.352063    0.353918
PDH_R00209    0.352021    0.265625
ZWF_R00835    0.428585    0.982833
GLH_R02035    0.584929    0.973545
PGD_R01528    0.651221    0.918706
RPI_R01056    0.663749    0.80064
RPE_R01529    0.637113    0.860179
TXT_R01641    0.501711    0.735972
TAL_R08575    0.566723    0.88656
TXT_R01067    0.426938    0.837812
FBP_R00762    0.372405    0.857241
CSN_R00351    0.392982    0.198019
ACN_R01325    0.505983    0.224334
ACN_R01900    0.61434    0.176347
ICD_R00709    0.645299    0.100497
KGD_R08549    0.62208    0.016908
SCS_R00405    0.535394    -0.037271
SDH_R02164    0.402092    -0.03917
FUM_R01082    0.340351    0.035483
MDH_R00342    0.33416    0.140744
PPC_R00345    0.40095304    0.50690003
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