KarrLab/obj_tables

View on GitHub
examples/thermodynamic_metabolic_model/data.tsv/Metabolites.tsv

Summary

Maintainability
Test Coverage
!!ObjTables type='Data' tableFormat='row' class='Metabolite' name='Metabolites' date='2020-06-02 16:01:35' objTablesVersion='1.0.9'        
!Id    !Name    !Formula
2ddg6p    2-dehydro-3-deoxy-D-gluconate 6-phosphate    C6H8O9P
2pg    D-Glycerate 2-phosphate    C3H4O7P
3pg    3-Phospho-D-glycerate    C3H4O7P
6pgc    6-Phospho-D-gluconate    C6H10O10P
6pgl    6-phospho-D-glucono-1,5-lactone    C6H9O9P
13dpg    3-Phospho-D-glyceroyl phosphate    C3H4O10P2
ac    Acetate    C2H3O2
acald    Acetaldehyde    C2H4O
accoa    Acetyl-CoA    C23H34N7O17P3S
acon-C    cis-Aconitate    C6H3O6
actp    Acetyl phosphate    C2H3O5P
adp    Adenosine diphosphate    C10H12N5O10P2
akg    2-Oxoglutarate    C5H4O5
amp    Adenosine monophosphate    C10H12N5O7P
atp    Adenosine triphosphate    C10H12N5O13P3
cit    Citrate    C6H5O7
co2    CO2    CO2
coa    Coenzyme A    C21H32N7O16P3S
dhap    Dihydroxyacetone phosphate    C3H5O6P
e4p    D-Erythrose 4-phosphate    C4H7O7P
etoh    Ethanol    C2H6O
f1p    Fructose-1-phosphate    C6H11O9P
f6p    D-Fructose 6-phosphate    C6H11O9P
fdp    D-Fructose 1,6-bisphosphate    C6H10O12P2
for    Formate    CHO2
fru    D-Fructose    C6H12O6
fum    Fumarate    C4H2O4
g1p    D-Glucose 1-phosphate    C6H11O9P
g3p    Glyceraldehyde 3-phosphate    C3H5O6P
g6p    D-Glucose 6-phosphate    C6H11O9P
gal    Galactose    C6H12O6
gal1p    Galactose-1-phosphate    C6H11O9P
glc-D    D-Glucose    C6H12O6
glcn    Gluconate    C6H11O7
gln-L    L-Glutamine    C5H10N2O3
glu-L    L-Glutamate    C5H8NO4
glx    Glyoxylate    C2HO3
glyc    Glycerol    C3H8O3
glyc3p    Glycerol 3-phosphate    C3H7O6P
h    H+    H
h2o    H2O    H2O
icit    Isocitrate    C6H5O7
lac-D    D-Lactate    C3H5O3
mal-L    L-Malate    C4H4O5
nad    Nicotinamide adenine dinucleotide    C21H26N7O14P2
nadh    Nicotinamide adenine dinucleotide - reduced    C21H27N7O14P2
nadp    Nicotinamide adenine dinucleotide phosphate    C21H25N7O17P3
nadph    Nicotinamide adenine dinucleotide phosphate - reduced    C21H26N7O17P3
nh4    Ammonium    H4N
o2    O2    O2
oaa    Oxaloacetate    C4H2O5
pep    Phosphoenolpyruvate    C3H2O6P
pi    Phosphate    HO4P
pyr    Pyruvate    C3H3O3
q8    Ubiquinone-8    C49H74O4
q8h2    Ubiquinol-8    C49H76O4
r5p    alpha-D-Ribose 5-phosphate    C5H9O8P
ru5p-D    D-Ribulose 5-phosphate    C5H9O8P
s7p    Sedoheptulose 7-phosphate    C7H13O10P
succ    Succinate    C4H4O4
succoa    Succinyl-CoA    C25H35N7O19P3S
xu5p-D    D-Xylulose 5-phosphate    C5H9O8P