| wc_sim/on_ROSS/__init__.py | 0 | A 0 mins | F 0% |
| wc_sim/on_ROSS/try_c_and_python/__init__.py | 0 | A 0 mins | F 0% |
| wc_sim/on_ROSS/try_c_and_python/python_call_c.py | 14 | A 0 mins |
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| wc_sim/on_ROSS/try_c_and_python/setup_python_call_c.py | 24 | A 0 mins | A 100% |
| wc_sim/on_ROSS/try_c_and_python/setup_python_with_c_callback.py | 19 | A 0 mins | A 100% |
| wc_sim/submodels/__init__.py | 0 | A 0 mins | F 0% |
| wc_sim/submodels/testing/__init__.py | 0 | A 0 mins | F 0% |
| wc_sim/testing/transformations.py | 28 | A 0 mins | A 100% |
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| .karr_lab_build_utils.yml | |
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| LICENSE | |
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| MANIFEST.in | |
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| README.md | |
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| docs/about.rst | |
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| docs/index.rst | |
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| docs/installation.rst | |
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| docs/misc/Caching description.xlsx | |
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| docs/misc/metadata hierarchy.txt | |
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| docs/references.bib | |
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| docs/requirements.rtd.txt | |
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| docs/requirements.txt | |
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| examples/Read and plot wc_simulate dataframe.ipynb | |
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| examples/config/debug.default.cfg | |
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| examples/jupyter_examples/Example simulation run.ipynb | |
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| examples/transcription_translation_hybrid_model/model.xlsx | |
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| examples/translation_metabolism_hybrid_model/model.xlsx | |
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| migrations/data_schema_migration_conf--wc_sim--wc_lang--2019-06-25-22-43-31.yaml | |
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| migrations/data_schema_migration_conf--wc_sim--wc_lang--2019-07-12-12-55-44.yaml | |
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| multialg_analysis/README.txt | |
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| multialg_analysis/data/plots/ode_modes_species_trajectories.pdf | |
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| multialg_analysis/data/run_ode_solver.xlsx | |
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| multialg_analysis/data/run_ode_solver_one_step.xlsx | |
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| multialg_analysis/data/run_ode_solver_w_internal.tsv | |
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| multialg_analysis/data/run_ode_solver_w_internal.xlsx | |
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| presentation_2020_07_06_WC_sim_for_H1_model/model_core_expression_usage.tsv | |
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| pytest.ini | |
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| requirements.txt | |
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| setup.cfg | |
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| wc_sim/config/core.default.cfg | |
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| wc_sim/config/core.schema.cfg | |
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| wc_sim/config/debug.default.cfg | |
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| wc_sim/on_ROSS/try_c_and_python/callbacks.c | |
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| wc_sim/on_ROSS/try_c_and_python/spammodule.c | |
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