LucaCappelletti94/crr_labels

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crr_labels/fantom.json

Summary

Maintainability
Test Coverage
{
    "cell_lines": "http://fantom.gsc.riken.jp/5/datafiles/latest/extra/Enhancers/Human.sample_name2library_id.txt",
    "hg19": {
        "promoters": {
            "matrix": "http://fantom.gsc.riken.jp/5/datafiles/latest/extra/CAGE_peaks/hg19.cage_peak_phase1and2combined_tpm_ann.osc.txt.gz",
            "bed": "https://fantom.gsc.riken.jp/5/datafiles/latest/extra/CAGE_peaks/hg19.cage_peak_phase1and2combined_coord.bed.gz"
        },
        "enhancers": {
            "matrix": "http://fantom.gsc.riken.jp/5/datafiles/latest/extra/Enhancers/human_permissive_enhancers_phase_1_and_2_expression_tpm_matrix.txt.gz",
            "bed": "http://fantom.gsc.riken.jp/5/datafiles/latest/extra/Enhancers/human_permissive_enhancers_phase_1_and_2.bed.gz"
        }
    },
    "hg38": {
        "promoters": {
            "matrix": "https://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_latest/extra/CAGE_peaks_expression/hg38_fair+new_CAGE_peaks_phase1and2_tpm_ann.osc.txt.gz",
            "bed": "https://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_latest/extra/CAGE_peaks/hg38_fair+new_CAGE_peaks_phase1and2.bed.gz"
        },
        "enhancers": {
            "matrix": "https://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_latest/extra/enhancer/F5.hg38.enhancers.expression.tpm.matrix.gz",
            "bed": "https://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_latest/extra/enhancer/F5.hg38.enhancers.bed.gz"
        }
    }
}