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LucaCappelletti94/epigenomic_dataset

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Showing 31 of 35 total issues

Function active_enhancers_vs_active_promoters has 8 arguments (exceeds 4 allowed). Consider refactoring.
Open

def active_enhancers_vs_active_promoters(
Severity: Major
Found in build/lib/epigenomic_dataset/load_tasks.py - About 1 hr to fix

    Function inactive_enhancers_vs_inactive_promoters has 8 arguments (exceeds 4 allowed). Consider refactoring.
    Open

    def inactive_enhancers_vs_inactive_promoters(
    Severity: Major
    Found in build/lib/epigenomic_dataset/load_tasks.py - About 1 hr to fix

      Function extract has 7 arguments (exceeds 4 allowed). Consider refactoring.
      Open

      def extract(
      Severity: Major
      Found in epigenomic_dataset/extract.py - About 50 mins to fix

        Function extract has 7 arguments (exceeds 4 allowed). Consider refactoring.
        Open

        def extract(
        Severity: Major
        Found in build/lib/epigenomic_dataset/extract.py - About 50 mins to fix

          Function run_pipeline has 6 arguments (exceeds 4 allowed). Consider refactoring.
          Open

          def run_pipeline(
          Severity: Minor
          Found in run_crr_build.py - About 45 mins to fix

            Function build_extraction_tasks has 6 arguments (exceeds 4 allowed). Consider refactoring.
            Open

            def build_extraction_tasks(
            Severity: Minor
            Found in build/lib/epigenomic_dataset/extract.py - About 45 mins to fix

              Function build_extraction_tasks has 6 arguments (exceeds 4 allowed). Consider refactoring.
              Open

              def build_extraction_tasks(
              Severity: Minor
              Found in epigenomic_dataset/extract.py - About 45 mins to fix

                Function extraction_job has 5 arguments (exceeds 4 allowed). Consider refactoring.
                Open

                def extraction_job(
                Severity: Minor
                Found in build/lib/epigenomic_dataset/extract.py - About 35 mins to fix

                  Function get_target_path has 5 arguments (exceeds 4 allowed). Consider refactoring.
                  Open

                  def get_target_path(root: str, cell_line: str, assembly: str, assay_term_name: str, target: str) -> str:
                  Severity: Minor
                  Found in epigenomic_dataset/mine.py - About 35 mins to fix

                    Function extraction_job has 5 arguments (exceeds 4 allowed). Consider refactoring.
                    Open

                    def extraction_job(
                    Severity: Minor
                    Found in epigenomic_dataset/extract.py - About 35 mins to fix

                      Function get_target_path has 5 arguments (exceeds 4 allowed). Consider refactoring.
                      Open

                      def get_target_path(root: str, cell_line: str, assembly: str, assay_term_name: str, target: str) -> str:
                      Severity: Minor
                      Found in build/lib/epigenomic_dataset/mine.py - About 35 mins to fix
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