| .gitignore | |
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| .spp_cache/badges.json | |
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| .travis.yml | |
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| Building updated README table.ipynb | |
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| Features number counts.ipynb | |
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| MANIFEST.in | |
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| README.rst | |
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| Retrieving HG19 files metadata.ipynb | |
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| Retrieving HG38 files metadata.ipynb | |
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| TSNE Embedding.ipynb | |
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| Updating labels to regression.ipynb | |
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| build/lib/epigenomic_dataset/__init__.py | 19 | A 40 mins |
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| build/lib/epigenomic_dataset/__version__.py | 2 | A 0 mins |
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| build/lib/epigenomic_dataset/build.py | 77 | A 1 hr |
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| build/lib/epigenomic_dataset/concatenate.py | 55 | A 0 mins |
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| build/lib/epigenomic_dataset/extract.py | 159 | A 2 hrs |
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| build/lib/epigenomic_dataset/load_epigenomes.py | 137 | A 1 hr |
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| build/lib/epigenomic_dataset/load_tasks.py | 434 | D 2 days |
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| build/lib/epigenomic_dataset/logging.py | 13 | C 1 day |
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| build/lib/epigenomic_dataset/mine.py | 168 | A 2 hrs |
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| build/lib/epigenomic_dataset/utils/__init__.py | 11 | A 0 mins |
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| build/lib/epigenomic_dataset/utils/available_metrics.py | 5 | A 0 mins |
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| build/lib/epigenomic_dataset/utils/cell_lines.py | 13 | A 0 mins |
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| build/lib/epigenomic_dataset/utils/normalize_epigenomic_data.py | 35 | A 0 mins |
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| build/lib/epigenomic_dataset/utils/window_sizes.py | 7 | A 0 mins |
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| embeddings/hg38/sequence/A549/256/active_enhancers_vs_active_promoters.csv.xz | |
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| embeddings/hg38/sequence/A549/256/active_enhancers_vs_inactive_enhancers.csv.xz | |
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| embeddings/hg38/sequence/A549/256/active_promoters_vs_inactive_promoters.csv.xz | |
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| embeddings/hg38/sequence/A549/256/active_vs_inactive.csv.xz | |
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| embeddings/hg38/sequence/A549/256/inactive_enhancers_vs_inactive_promoters.csv.xz | |
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| embeddings/hg38/sequence/GM12878/256/active_enhancers_vs_active_promoters.csv.xz | |
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| embeddings/hg38/sequence/GM12878/256/active_enhancers_vs_inactive_enhancers.csv.xz | |
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| embeddings/hg38/sequence/GM12878/256/active_promoters_vs_inactive_promoters.csv.xz | |
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| embeddings/hg38/sequence/GM12878/256/active_vs_inactive.csv.xz | |
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| embeddings/hg38/sequence/GM12878/256/inactive_enhancers_vs_inactive_promoters.csv.xz | |
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| embeddings/hg38/sequence/H1/256/active_enhancers_vs_active_promoters.csv.xz | |
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| embeddings/hg38/sequence/H1/256/active_enhancers_vs_inactive_enhancers.csv.xz | |
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| embeddings/hg38/sequence/H1/256/active_promoters_vs_inactive_promoters.csv.xz | |
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| embeddings/hg38/sequence/H1/256/active_vs_inactive.csv.xz | |
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| embeddings/hg38/sequence/H1/256/inactive_enhancers_vs_inactive_promoters.csv.xz | |
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| embeddings/hg38/sequence/HEK293/256/active_enhancers_vs_active_promoters.csv.xz | |
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| embeddings/hg38/sequence/HEK293/256/active_enhancers_vs_inactive_enhancers.csv.xz | |
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| embeddings/hg38/sequence/HEK293/256/active_promoters_vs_inactive_promoters.csv.xz | |
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| embeddings/hg38/sequence/HEK293/256/active_vs_inactive.csv.xz | |
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| embeddings/hg38/sequence/HEK293/256/inactive_enhancers_vs_inactive_promoters.csv.xz | |
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| embeddings/hg38/sequence/HepG2/256/active_enhancers_vs_active_promoters.csv.xz | |
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| embeddings/hg38/sequence/HepG2/256/active_enhancers_vs_inactive_enhancers.csv.xz | |
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| embeddings/hg38/sequence/HepG2/256/active_promoters_vs_inactive_promoters.csv.xz | |
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| embeddings/hg38/sequence/HepG2/256/active_vs_inactive.csv.xz | |
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| embeddings/hg38/sequence/HepG2/256/inactive_enhancers_vs_inactive_promoters.csv.xz | |
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