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Function fast_to_categorical
has a Cognitive Complexity of 11 (exceeds 5 allowed). Consider refactoring. Open
Open
def fast_to_categorical(y: np.ndarray, num_classes: int, unknown_nucleotide_value: float) -> np.ndarray:
"""Return one hot encoded batches.
This is our implementation of to_categorical from keras.
This implementation runs 6 times faster.
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Cognitive Complexity
Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.
A method's cognitive complexity is based on a few simple rules:
- Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
- Code is considered more complex for each "break in the linear flow of the code"
- Code is considered more complex when "flow breaking structures are nested"
Further reading
Function __init__
has 8 arguments (exceeds 4 allowed). Consider refactoring. Open
Open
def __init__(
Function nucleotides_to_numbers
has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring. Open
Open
def nucleotides_to_numbers(nucleotides: str, sequences: np.ndarray) -> np.ndarray:
"""Return sequences encoded as small integers.
Parameters
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Cognitive Complexity
Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.
A method's cognitive complexity is based on a few simple rules:
- Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
- Code is considered more complex for each "break in the linear flow of the code"
- Code is considered more complex when "flow breaking structures are nested"