File FskPortObject.java
has 536 lines of code (exceeds 250 allowed). Consider refactoring. Open
package de.bund.bfr.knime.fsklab;
/*
***************************************************************************************************
* Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
*
- Create a ticketCreate a ticket
Method loadPortObject
has 89 lines of code (exceeds 25 allowed). Consider refactoring. Open
@Override
@SuppressWarnings("unchecked")
public FskPortObject loadPortObject(PortObjectZipInputStream in, PortObjectSpec spec, ExecutionMonitor exec)
throws IOException, CanceledExecutionException {
- Create a ticketCreate a ticket
Method loadPortObject
has a Cognitive Complexity of 22 (exceeds 5 allowed). Consider refactoring. Open
@Override
@SuppressWarnings("unchecked")
public FskPortObject loadPortObject(PortObjectZipInputStream in, PortObjectSpec spec, ExecutionMonitor exec)
throws IOException, CanceledExecutionException {
- Read upRead up
- Create a ticketCreate a ticket
Cognitive Complexity
Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.
A method's cognitive complexity is based on a few simple rules:
- Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
- Code is considered more complex for each "break in the linear flow of the code"
- Code is considered more complex when "flow breaking structures are nested"
Further reading
Method savePortObject
has 59 lines of code (exceeds 25 allowed). Consider refactoring. Open
@Override
public void savePortObject(final FskPortObject portObject, final PortObjectZipOutputStream out,
final ExecutionMonitor exec) throws IOException, CanceledExecutionException {
// model entry (file with model script)
- Create a ticketCreate a ticket
Method createUI
has 30 lines of code (exceeds 25 allowed). Consider refactoring. Open
private void createUI() {
final FPanel simulationPanel = new FPanel();
simulationPanel.setLayout(new BorderLayout());
final JScrollPane parametersPane = new JScrollPane(
- Create a ticketCreate a ticket
Method savePortObject
has a Cognitive Complexity of 10 (exceeds 5 allowed). Consider refactoring. Open
@Override
public void savePortObject(final FskPortObject portObject, final PortObjectZipOutputStream out,
final ExecutionMonitor exec) throws IOException, CanceledExecutionException {
// model entry (file with model script)
- Read upRead up
- Create a ticketCreate a ticket
Cognitive Complexity
Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.
A method's cognitive complexity is based on a few simple rules:
- Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
- Code is considered more complex for each "break in the linear flow of the code"
- Code is considered more complex when "flow breaking structures are nested"
Further reading
Method getListCellRendererComponent
has 5 arguments (exceeds 4 allowed). Consider refactoring. Open
public Component getListCellRendererComponent(JList list, Object value, int index, boolean isSelected,
boolean cellHasFocus) {
- Create a ticketCreate a ticket
Refactor this method to reduce its Cognitive Complexity from 22 to the 15 allowed. Open
public FskPortObject loadPortObject(PortObjectZipInputStream in, PortObjectSpec spec, ExecutionMonitor exec)
- Read upRead up
- Create a ticketCreate a ticket
- Exclude checks
Cognitive Complexity is a measure of how hard the control flow of a method is to understand. Methods with high Cognitive Complexity will be difficult to maintain.
See
Use static access with "javax.swing.SwingConstants" for "RIGHT". Open
field.setHorizontalAlignment(JTextField.RIGHT);
- Read upRead up
- Create a ticketCreate a ticket
- Exclude checks
In the interest of code clarity, static
members of a base
class should never be accessed using a derived type's name.
Doing so is confusing and could create the illusion that two different static members exist.
Noncompliant Code Example
class Parent { public static int counter; } class Child extends Parent { public Child() { Child.counter++; // Noncompliant } }
Compliant Solution
class Parent { public static int counter; } class Child extends Parent { public Child() { Parent.counter++; } }
Make "icons" transient or serializable. Open
private Map<Object, Icon> icons = null;
- Read upRead up
- Create a ticketCreate a ticket
- Exclude checks
Fields in a Serializable
class must themselves be either Serializable
or transient
even if the class is
never explicitly serialized or deserialized. For instance, under load, most J2EE application frameworks flush objects to disk, and an allegedly
Serializable
object with non-transient, non-serializable data members could cause program crashes, and open the door to attackers. In
general a Serializable
class is expected to fulfil its contract and not have an unexpected behaviour when an instance is serialized.
This rule raises an issue on non-Serializable
fields, and on collection fields when they are not private
(because they
could be assigned non-Serializable
values externally), and when they are assigned non-Serializable
types within the
class.
Noncompliant Code Example
public class Address { //... } public class Person implements Serializable { private static final long serialVersionUID = 1905122041950251207L; private String name; private Address address; // Noncompliant; Address isn't serializable }
Compliant Solution
public class Address implements Serializable { private static final long serialVersionUID = 2405172041950251807L; } public class Person implements Serializable { private static final long serialVersionUID = 1905122041950251207L; private String name; private Address address; }
Exceptions
The alternative to making all members serializable
or transient
is to implement special methods which take on the
responsibility of properly serializing and de-serializing the object. This rule ignores classes which implement the following methods:
private void writeObject(java.io.ObjectOutputStream out) throws IOException private void readObject(java.io.ObjectInputStream in) throws IOException, ClassNotFoundException;
See
- MITRE, CWE-594 - Saving Unserializable Objects to Disk
- Oracle Java 6, Serializable
- Oracle Java 7, Serializable
Define a constant instead of duplicating this literal "genericModel" 3 times. Open
modelClasses.put("genericModel", GenericModel.class);
- Read upRead up
- Create a ticketCreate a ticket
- Exclude checks
Duplicated string literals make the process of refactoring error-prone, since you must be sure to update all occurrences.
On the other hand, constants can be referenced from many places, but only need to be updated in a single place.
Noncompliant Code Example
With the default threshold of 3:
public void run() { prepare("action1"); // Noncompliant - "action1" is duplicated 3 times execute("action1"); release("action1"); } @SuppressWarning("all") // Compliant - annotations are excluded private void method1() { /* ... */ } @SuppressWarning("all") private void method2() { /* ... */ } public String method3(String a) { System.out.println("'" + a + "'"); // Compliant - literal "'" has less than 5 characters and is excluded return ""; // Compliant - literal "" has less than 5 characters and is excluded }
Compliant Solution
private static final String ACTION_1 = "action1"; // Compliant public void run() { prepare(ACTION_1); // Compliant execute(ACTION_1); release(ACTION_1); }
Exceptions
To prevent generating some false-positives, literals having less than 5 characters are excluded.
Define a constant instead of duplicating this literal "UTF-8" 15 times. Open
IOUtils.write(portObject.model, out, "UTF-8");
- Read upRead up
- Create a ticketCreate a ticket
- Exclude checks
Duplicated string literals make the process of refactoring error-prone, since you must be sure to update all occurrences.
On the other hand, constants can be referenced from many places, but only need to be updated in a single place.
Noncompliant Code Example
With the default threshold of 3:
public void run() { prepare("action1"); // Noncompliant - "action1" is duplicated 3 times execute("action1"); release("action1"); } @SuppressWarning("all") // Compliant - annotations are excluded private void method1() { /* ... */ } @SuppressWarning("all") private void method2() { /* ... */ } public String method3(String a) { System.out.println("'" + a + "'"); // Compliant - literal "'" has less than 5 characters and is excluded return ""; // Compliant - literal "" has less than 5 characters and is excluded }
Compliant Solution
private static final String ACTION_1 = "action1"; // Compliant public void run() { prepare(ACTION_1); // Compliant execute(ACTION_1); release(ACTION_1); }
Exceptions
To prevent generating some false-positives, literals having less than 5 characters are excluded.
Use already-defined constant 'WORKSPACE' instead of duplicating its value here. Open
final Path workspacePath = FileUtil.createTempFile("workspace", ".r").toPath();
- Read upRead up
- Create a ticketCreate a ticket
- Exclude checks
Duplicated string literals make the process of refactoring error-prone, since you must be sure to update all occurrences.
On the other hand, constants can be referenced from many places, but only need to be updated in a single place.
Noncompliant Code Example
With the default threshold of 3:
public void run() { prepare("action1"); // Noncompliant - "action1" is duplicated 3 times execute("action1"); release("action1"); } @SuppressWarning("all") // Compliant - annotations are excluded private void method1() { /* ... */ } @SuppressWarning("all") private void method2() { /* ... */ } public String method3(String a) { System.out.println("'" + a + "'"); // Compliant - literal "'" has less than 5 characters and is excluded return ""; // Compliant - literal "" has less than 5 characters and is excluded }
Compliant Solution
private static final String ACTION_1 = "action1"; // Compliant public void run() { prepare(ACTION_1); // Compliant execute(ACTION_1); release(ACTION_1); }
Exceptions
To prevent generating some false-positives, literals having less than 5 characters are excluded.
Use try-with-resources or close this "ObjectOutputStream" in a "finally" clause. Open
final ObjectOutputStream oos = new ObjectOutputStream(out);
- Read upRead up
- Create a ticketCreate a ticket
- Exclude checks
Connections, streams, files, and other classes that implement the Closeable
interface or its super-interface,
AutoCloseable
, needs to be closed after use. Further, that close
call must be made in a finally
block otherwise
an exception could keep the call from being made. Preferably, when class implements AutoCloseable
, resource should be created using
"try-with-resources" pattern and will be closed automatically.
Failure to properly close resources will result in a resource leak which could bring first the application and then perhaps the box the application is on to their knees.
Noncompliant Code Example
private void readTheFile() throws IOException { Path path = Paths.get(this.fileName); BufferedReader reader = Files.newBufferedReader(path, this.charset); // ... reader.close(); // Noncompliant // ... Files.lines("input.txt").forEach(System.out::println); // Noncompliant: The stream needs to be closed } private void doSomething() { OutputStream stream = null; try { for (String property : propertyList) { stream = new FileOutputStream("myfile.txt"); // Noncompliant // ... } } catch (Exception e) { // ... } finally { stream.close(); // Multiple streams were opened. Only the last is closed. } }
Compliant Solution
private void readTheFile(String fileName) throws IOException { Path path = Paths.get(fileName); try (BufferedReader reader = Files.newBufferedReader(path, StandardCharsets.UTF_8)) { reader.readLine(); // ... } // .. try (Stream<String> input = Files.lines("input.txt")) { input.forEach(System.out::println); } } private void doSomething() { OutputStream stream = null; try { stream = new FileOutputStream("myfile.txt"); for (String property : propertyList) { // ... } } catch (Exception e) { // ... } finally { stream.close(); } }
Exceptions
Instances of the following classes are ignored by this rule because close
has no effect:
-
java.io.ByteArrayOutputStream
-
java.io.ByteArrayInputStream
-
java.io.CharArrayReader
-
java.io.CharArrayWriter
-
java.io.StringReader
-
java.io.StringWriter
Java 7 introduced the try-with-resources statement, which implicitly closes Closeables
. All resources opened in a try-with-resources
statement are ignored by this rule.
try (BufferedReader br = new BufferedReader(new FileReader(fileName))) { //... } catch ( ... ) { //... }
See
- MITRE, CWE-459 - Incomplete Cleanup
- MITRE, CWE-772 - Missing Release of Resource after Effective Lifetime
- CERT, FIO04-J. - Release resources when they are no longer needed
- CERT, FIO42-C. - Close files when they are no longer needed
- Try With Resources
Use try-with-resources or close this "ObjectInputStream" in a "finally" clause. Open
final ObjectInputStream ois = new ObjectInputStream(in);
- Read upRead up
- Create a ticketCreate a ticket
- Exclude checks
Connections, streams, files, and other classes that implement the Closeable
interface or its super-interface,
AutoCloseable
, needs to be closed after use. Further, that close
call must be made in a finally
block otherwise
an exception could keep the call from being made. Preferably, when class implements AutoCloseable
, resource should be created using
"try-with-resources" pattern and will be closed automatically.
Failure to properly close resources will result in a resource leak which could bring first the application and then perhaps the box the application is on to their knees.
Noncompliant Code Example
private void readTheFile() throws IOException { Path path = Paths.get(this.fileName); BufferedReader reader = Files.newBufferedReader(path, this.charset); // ... reader.close(); // Noncompliant // ... Files.lines("input.txt").forEach(System.out::println); // Noncompliant: The stream needs to be closed } private void doSomething() { OutputStream stream = null; try { for (String property : propertyList) { stream = new FileOutputStream("myfile.txt"); // Noncompliant // ... } } catch (Exception e) { // ... } finally { stream.close(); // Multiple streams were opened. Only the last is closed. } }
Compliant Solution
private void readTheFile(String fileName) throws IOException { Path path = Paths.get(fileName); try (BufferedReader reader = Files.newBufferedReader(path, StandardCharsets.UTF_8)) { reader.readLine(); // ... } // .. try (Stream<String> input = Files.lines("input.txt")) { input.forEach(System.out::println); } } private void doSomething() { OutputStream stream = null; try { stream = new FileOutputStream("myfile.txt"); for (String property : propertyList) { // ... } } catch (Exception e) { // ... } finally { stream.close(); } }
Exceptions
Instances of the following classes are ignored by this rule because close
has no effect:
-
java.io.ByteArrayOutputStream
-
java.io.ByteArrayInputStream
-
java.io.CharArrayReader
-
java.io.CharArrayWriter
-
java.io.StringReader
-
java.io.StringWriter
Java 7 introduced the try-with-resources statement, which implicitly closes Closeables
. All resources opened in a try-with-resources
statement are ignored by this rule.
try (BufferedReader br = new BufferedReader(new FileReader(fileName))) { //... } catch ( ... ) { //... }
See
- MITRE, CWE-459 - Incomplete Cleanup
- MITRE, CWE-772 - Missing Release of Resource after Effective Lifetime
- CERT, FIO04-J. - Release resources when they are no longer needed
- CERT, FIO42-C. - Close files when they are no longer needed
- Try With Resources
Use try-with-resources or close this "ObjectInputStream" in a "finally" clause. Open
final ObjectInputStream ois = new ObjectInputStream(in);
- Read upRead up
- Create a ticketCreate a ticket
- Exclude checks
Connections, streams, files, and other classes that implement the Closeable
interface or its super-interface,
AutoCloseable
, needs to be closed after use. Further, that close
call must be made in a finally
block otherwise
an exception could keep the call from being made. Preferably, when class implements AutoCloseable
, resource should be created using
"try-with-resources" pattern and will be closed automatically.
Failure to properly close resources will result in a resource leak which could bring first the application and then perhaps the box the application is on to their knees.
Noncompliant Code Example
private void readTheFile() throws IOException { Path path = Paths.get(this.fileName); BufferedReader reader = Files.newBufferedReader(path, this.charset); // ... reader.close(); // Noncompliant // ... Files.lines("input.txt").forEach(System.out::println); // Noncompliant: The stream needs to be closed } private void doSomething() { OutputStream stream = null; try { for (String property : propertyList) { stream = new FileOutputStream("myfile.txt"); // Noncompliant // ... } } catch (Exception e) { // ... } finally { stream.close(); // Multiple streams were opened. Only the last is closed. } }
Compliant Solution
private void readTheFile(String fileName) throws IOException { Path path = Paths.get(fileName); try (BufferedReader reader = Files.newBufferedReader(path, StandardCharsets.UTF_8)) { reader.readLine(); // ... } // .. try (Stream<String> input = Files.lines("input.txt")) { input.forEach(System.out::println); } } private void doSomething() { OutputStream stream = null; try { stream = new FileOutputStream("myfile.txt"); for (String property : propertyList) { // ... } } catch (Exception e) { // ... } finally { stream.close(); } }
Exceptions
Instances of the following classes are ignored by this rule because close
has no effect:
-
java.io.ByteArrayOutputStream
-
java.io.ByteArrayInputStream
-
java.io.CharArrayReader
-
java.io.CharArrayWriter
-
java.io.StringReader
-
java.io.StringWriter
Java 7 introduced the try-with-resources statement, which implicitly closes Closeables
. All resources opened in a try-with-resources
statement are ignored by this rule.
try (BufferedReader br = new BufferedReader(new FileReader(fileName))) { //... } catch ( ... ) { //... }
See
- MITRE, CWE-459 - Incomplete Cleanup
- MITRE, CWE-772 - Missing Release of Resource after Effective Lifetime
- CERT, FIO04-J. - Release resources when they are no longer needed
- CERT, FIO42-C. - Close files when they are no longer needed
- Try With Resources
Use try-with-resources or close this "ObjectOutputStream" in a "finally" clause. Open
final ObjectOutputStream oos = new ObjectOutputStream(out);
- Read upRead up
- Create a ticketCreate a ticket
- Exclude checks
Connections, streams, files, and other classes that implement the Closeable
interface or its super-interface,
AutoCloseable
, needs to be closed after use. Further, that close
call must be made in a finally
block otherwise
an exception could keep the call from being made. Preferably, when class implements AutoCloseable
, resource should be created using
"try-with-resources" pattern and will be closed automatically.
Failure to properly close resources will result in a resource leak which could bring first the application and then perhaps the box the application is on to their knees.
Noncompliant Code Example
private void readTheFile() throws IOException { Path path = Paths.get(this.fileName); BufferedReader reader = Files.newBufferedReader(path, this.charset); // ... reader.close(); // Noncompliant // ... Files.lines("input.txt").forEach(System.out::println); // Noncompliant: The stream needs to be closed } private void doSomething() { OutputStream stream = null; try { for (String property : propertyList) { stream = new FileOutputStream("myfile.txt"); // Noncompliant // ... } } catch (Exception e) { // ... } finally { stream.close(); // Multiple streams were opened. Only the last is closed. } }
Compliant Solution
private void readTheFile(String fileName) throws IOException { Path path = Paths.get(fileName); try (BufferedReader reader = Files.newBufferedReader(path, StandardCharsets.UTF_8)) { reader.readLine(); // ... } // .. try (Stream<String> input = Files.lines("input.txt")) { input.forEach(System.out::println); } } private void doSomething() { OutputStream stream = null; try { stream = new FileOutputStream("myfile.txt"); for (String property : propertyList) { // ... } } catch (Exception e) { // ... } finally { stream.close(); } }
Exceptions
Instances of the following classes are ignored by this rule because close
has no effect:
-
java.io.ByteArrayOutputStream
-
java.io.ByteArrayInputStream
-
java.io.CharArrayReader
-
java.io.CharArrayWriter
-
java.io.StringReader
-
java.io.StringWriter
Java 7 introduced the try-with-resources statement, which implicitly closes Closeables
. All resources opened in a try-with-resources
statement are ignored by this rule.
try (BufferedReader br = new BufferedReader(new FileReader(fileName))) { //... } catch ( ... ) { //... }
See
- MITRE, CWE-459 - Incomplete Cleanup
- MITRE, CWE-772 - Missing Release of Resource after Effective Lifetime
- CERT, FIO04-J. - Release resources when they are no longer needed
- CERT, FIO42-C. - Close files when they are no longer needed
- Try With Resources
Identical blocks of code found in 4 locations. Consider refactoring. Open
private static String buildParameterScript(FskSimulation simulation) {
String paramScript = "";
for (final Map.Entry<String, String> entry : simulation.getParameters().entrySet()) {
final String parameterName = entry.getKey();
- Read upRead up
- Create a ticketCreate a ticket
Duplicated Code
Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:
Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.
When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).
Tuning
This issue has a mass of 70.
We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.
The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.
If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.
See codeclimate-duplication
's documentation for more information about tuning the mass threshold in your .codeclimate.yml
.
Refactorings
- Extract Method
- Extract Class
- Form Template Method
- Introduce Null Object
- Pull Up Method
- Pull Up Field
- Substitute Algorithm
Further Reading
- Don't Repeat Yourself on the C2 Wiki
- Duplicated Code on SourceMaking
- Refactoring: Improving the Design of Existing Code by Martin Fowler. Duplicated Code, p76