SiLeBAT/FSK-Lab

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de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java

Summary

Maintainability
F
1 wk
Test Coverage

Method getDataTable has a Cognitive Complexity of 100 (exceeds 5 allowed). Consider refactoring.
Open

    private void getDataTable(Bfrdb db) {
        try {
            try {
                if (refresher != null) refresher.call();
            }

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

File EmReaderUi.java has 617 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*******************************************************************************
 * Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by

EmReaderUi has 52 methods (exceeds 20 allowed). Consider refactoring.
Open

public class EmReaderUi extends JPanel {
    /**
     * 
     */
    private static final long serialVersionUID = -7838365860944621209L;

Method getDataTable has 132 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private void getDataTable(Bfrdb db) {
        try {
            try {
                if (refresher != null) refresher.call();
            }

Method setSettings has a Cognitive Complexity of 25 (exceeds 5 allowed). Consider refactoring.
Open

    public void setSettings(Config c, Integer defAgent, Integer defMatrix, Double defTemp, Double defPh, Double defAw, Double agentConc, Callable<Void> refresher) throws InvalidSettingsException {
        this.defTemp = defTemp;
        this.defPh = defPh;
        this.defAw = defAw;
        this.agentConc = agentConc;

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method passesFilter has a Cognitive Complexity of 22 (exceeds 5 allowed). Consider refactoring.
Open

    public static boolean passesFilter(
            final int level,
            final int qualityMode,
            final double qualityThresh,
            final String matrixString,

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method initComponents has 76 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private void initComponents() {
        // JFormDesigner - Component initialization - DO NOT MODIFY  //GEN-BEGIN:initComponents
        withoutData = new JCheckBox();
        modelReaderUi = new ModelReaderUi(true);
        qualityPanel = new JPanel();

Method setSelectedFilterResults has a Cognitive Complexity of 15 (exceeds 5 allowed). Consider refactoring.
Open

    private void setSelectedFilterResults() {
        String labelText = "<html>";
        List<KnimeTuple> kts = set.getSelectedTuples();
        for (KnimeTuple kt : kts) {
            if (kt != null) {

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method fillWithDefaults has a Cognitive Complexity of 14 (exceeds 5 allowed). Consider refactoring.
Open

    private void fillWithDefaults(Integer defAgent, Integer defMatrix, Double defTemp, Double defPh, Double defAw, LinkedHashMap<String, DoubleTextField[]> params) throws InvalidSettingsException {
        if (defAgent != null) {
            //c.getConfig("MdReaderUi").addInt(MdReaderUi.PARAM_AGENTID, defAgent);
            mdReaderUi.setAgensID(defAgent);
            mdReaderUi.setAgentString(""+DBKernel.getValue(db.getConnection(), "Agenzien", "ID", defAgent+"", "Agensname"));

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method passesFilter has 13 arguments (exceeds 4 allowed). Consider refactoring.
Open

            final int level,
            final int qualityMode,
            final double qualityThresh,
            final String matrixString,
            final String agentString,

Method fillWithDefaults has 38 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private void fillWithDefaults(Integer defAgent, Integer defMatrix, Double defTemp, Double defPh, Double defAw, LinkedHashMap<String, DoubleTextField[]> params) throws InvalidSettingsException {
        if (defAgent != null) {
            //c.getConfig("MdReaderUi").addInt(MdReaderUi.PARAM_AGENTID, defAgent);
            mdReaderUi.setAgensID(defAgent);
            mdReaderUi.setAgentString(""+DBKernel.getValue(db.getConnection(), "Agenzien", "ID", defAgent+"", "Agensname"));

Method setSettings has 35 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    public void setSettings(Config c, Integer defAgent, Integer defMatrix, Double defTemp, Double defPh, Double defAw, Double agentConc, Callable<Void> refresher) throws InvalidSettingsException {
        this.defTemp = defTemp;
        this.defPh = defPh;
        this.defAw = defAw;
        this.agentConc = agentConc;

Method passesFilter has 31 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    public static boolean passesFilter(
            final int level,
            final int qualityMode,
            final double qualityThresh,
            final String matrixString,

Method getOkApplyCancelPanel has 30 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private JPanel getOkApplyCancelPanel(final JDialog dialog, final PredictorViewNodeDialog pvnd) {
        JPanel panel = new JPanel();
        JButton okButton = new JButton("Ok");
        JButton applyButton = new JButton("Apply");
        JButton cancelButton = new JButton("Cancel");

Method setSettings has 8 arguments (exceeds 4 allowed). Consider refactoring.
Open

    public void setSettings(Config c, Integer defAgent, Integer defMatrix, Double defTemp, Double defPh, Double defAw, Double agentConc, Callable<Void> refresher) throws InvalidSettingsException {

Method fillWithDefaults has 6 arguments (exceeds 4 allowed). Consider refactoring.
Open

    private void fillWithDefaults(Integer defAgent, Integer defMatrix, Double defTemp, Double defPh, Double defAw, LinkedHashMap<String, DoubleTextField[]> params) throws InvalidSettingsException {

Avoid deeply nested control flow statements.
Open

                                if (rs2 != null && rs2.first()) {
                                    do {
                                        matchingIDs += "," + rs2.getInt("Basis");
                                    } while (rs2.next());
                                }                            

Avoid deeply nested control flow statements.
Open

                        if (el instanceof EstModelXml) {
                            EstModelXml emx = (EstModelXml) el;
                            labelText += emx.id + " -> " + emx.name + "<br>";
                            break;
                        }

Avoid deeply nested control flow statements.
Open

                                if (rs2 != null && rs2.first()) {
                                    do {
                                        matchingIDs += "," + rs2.getInt("Basis");
                                    } while (rs2.next());
                                }                            

Method saveSettingsTo has a Cognitive Complexity of 7 (exceeds 5 allowed). Consider refactoring.
Open

    public void saveSettingsTo(Config c) {
        if (set != null) set.saveConfig(c.addConfig("PredictorSettings"));
        
         modelReaderUi.saveSettingsTo(c.addConfig("ModelReaderUi"));
         mdReaderUi.saveSettingsTo(c.addConfig("MdReaderUi"));

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Avoid too many return statements within this method.
Open

                if (emx != null && emx.rms <= qualityThresh) return true;                

Avoid too many return statements within this method.
Open

                else return false;

Avoid too many return statements within this method.
Open

                if (emx != null && emx.r2 != null && emx.r2 >= qualityThresh) return true;                

Refactor this method to reduce its Cognitive Complexity from 23 to the 15 allowed.
Open

    public void setSettings(Config c, Integer defAgent, Integer defMatrix, Double defTemp, Double defPh, Double defAw, Double agentConc, Callable<Void> refresher) throws InvalidSettingsException {

Cognitive Complexity is a measure of how hard the control flow of a method is to understand. Methods with high Cognitive Complexity will be difficult to maintain.

See

Refactor this method to reduce its Cognitive Complexity from 100 to the 15 allowed.
Open

    private void getDataTable(Bfrdb db) {

Cognitive Complexity is a measure of how hard the control flow of a method is to understand. Methods with high Cognitive Complexity will be difficult to maintain.

See

Refactor this method to reduce its Cognitive Complexity from 20 to the 15 allowed.
Open

    public static boolean passesFilter(

Cognitive Complexity is a measure of how hard the control flow of a method is to understand. Methods with high Cognitive Complexity will be difficult to maintain.

See

Define a constant instead of duplicating this literal "CodeSystem" 6 times.
Open

                        String cs = rs.getString("CodeSystem");

Duplicated string literals make the process of refactoring error-prone, since you must be sure to update all occurrences.

On the other hand, constants can be referenced from many places, but only need to be updated in a single place.

Noncompliant Code Example

With the default threshold of 3:

public void run() {
  prepare("action1");                              // Noncompliant - "action1" is duplicated 3 times
  execute("action1");
  release("action1");
}

@SuppressWarning("all")                            // Compliant - annotations are excluded
private void method1() { /* ... */ }
@SuppressWarning("all")
private void method2() { /* ... */ }

public String method3(String a) {
  System.out.println("'" + a + "'");               // Compliant - literal "'" has less than 5 characters and is excluded
  return "";                                       // Compliant - literal "" has less than 5 characters and is excluded
}

Compliant Solution

private static final String ACTION_1 = "action1";  // Compliant

public void run() {
  prepare(ACTION_1);                               // Compliant
  execute(ACTION_1);
  release(ACTION_1);
}

Exceptions

To prevent generating some false-positives, literals having less than 5 characters are excluded.

Define a constant instead of duplicating this literal "ModelReaderUi" 3 times.
Open

         modelReaderUi.saveSettingsTo(c.addConfig("ModelReaderUi"));

Duplicated string literals make the process of refactoring error-prone, since you must be sure to update all occurrences.

On the other hand, constants can be referenced from many places, but only need to be updated in a single place.

Noncompliant Code Example

With the default threshold of 3:

public void run() {
  prepare("action1");                              // Noncompliant - "action1" is duplicated 3 times
  execute("action1");
  release("action1");
}

@SuppressWarning("all")                            // Compliant - annotations are excluded
private void method1() { /* ... */ }
@SuppressWarning("all")
private void method2() { /* ... */ }

public String method3(String a) {
  System.out.println("'" + a + "'");               // Compliant - literal "'" has less than 5 characters and is excluded
  return "";                                       // Compliant - literal "" has less than 5 characters and is excluded
}

Compliant Solution

private static final String ACTION_1 = "action1";  // Compliant

public void run() {
  prepare(ACTION_1);                               // Compliant
  execute(ACTION_1);
  release(ACTION_1);
}

Exceptions

To prevent generating some false-positives, literals having less than 5 characters are excluded.

Define a constant instead of duplicating this literal "MdReaderUi" 3 times.
Open

         mdReaderUi.saveSettingsTo(c.addConfig("MdReaderUi"));

Duplicated string literals make the process of refactoring error-prone, since you must be sure to update all occurrences.

On the other hand, constants can be referenced from many places, but only need to be updated in a single place.

Noncompliant Code Example

With the default threshold of 3:

public void run() {
  prepare("action1");                              // Noncompliant - "action1" is duplicated 3 times
  execute("action1");
  release("action1");
}

@SuppressWarning("all")                            // Compliant - annotations are excluded
private void method1() { /* ... */ }
@SuppressWarning("all")
private void method2() { /* ... */ }

public String method3(String a) {
  System.out.println("'" + a + "'");               // Compliant - literal "'" has less than 5 characters and is excluded
  return "";                                       // Compliant - literal "" has less than 5 characters and is excluded
}

Compliant Solution

private static final String ACTION_1 = "action1";  // Compliant

public void run() {
  prepare(ACTION_1);                               // Compliant
  execute(ACTION_1);
  release(ACTION_1);
}

Exceptions

To prevent generating some false-positives, literals having less than 5 characters are excluded.

Define a constant instead of duplicating this literal "PredictorSettings" 3 times.
Open

        if (set != null) set.saveConfig(c.addConfig("PredictorSettings"));

Duplicated string literals make the process of refactoring error-prone, since you must be sure to update all occurrences.

On the other hand, constants can be referenced from many places, but only need to be updated in a single place.

Noncompliant Code Example

With the default threshold of 3:

public void run() {
  prepare("action1");                              // Noncompliant - "action1" is duplicated 3 times
  execute("action1");
  release("action1");
}

@SuppressWarning("all")                            // Compliant - annotations are excluded
private void method1() { /* ... */ }
@SuppressWarning("all")
private void method2() { /* ... */ }

public String method3(String a) {
  System.out.println("'" + a + "'");               // Compliant - literal "'" has less than 5 characters and is excluded
  return "";                                       // Compliant - literal "" has less than 5 characters and is excluded
}

Compliant Solution

private static final String ACTION_1 = "action1";  // Compliant

public void run() {
  prepare(ACTION_1);                               // Compliant
  execute(ACTION_1);
  release(ACTION_1);
}

Exceptions

To prevent generating some false-positives, literals having less than 5 characters are excluded.

Make "refresher" transient or serializable.
Open

    private Callable<Void> refresher;

Fields in a Serializable class must themselves be either Serializable or transient even if the class is never explicitly serialized or deserialized. For instance, under load, most J2EE application frameworks flush objects to disk, and an allegedly Serializable object with non-transient, non-serializable data members could cause program crashes, and open the door to attackers. In general a Serializable class is expected to fulfil its contract and not have an unexpected behaviour when an instance is serialized.

This rule raises an issue on non-Serializable fields, and on collection fields when they are not private (because they could be assigned non-Serializable values externally), and when they are assigned non-Serializable types within the class.

Noncompliant Code Example

public class Address {
  //...
}

public class Person implements Serializable {
  private static final long serialVersionUID = 1905122041950251207L;

  private String name;
  private Address address;  // Noncompliant; Address isn't serializable
}

Compliant Solution

public class Address implements Serializable {
  private static final long serialVersionUID = 2405172041950251807L;
}

public class Person implements Serializable {
  private static final long serialVersionUID = 1905122041950251207L;

  private String name;
  private Address address;
}

Exceptions

The alternative to making all members serializable or transient is to implement special methods which take on the responsibility of properly serializing and de-serializing the object. This rule ignores classes which implement the following methods:

 private void writeObject(java.io.ObjectOutputStream out)
     throws IOException
 private void readObject(java.io.ObjectInputStream in)
     throws IOException, ClassNotFoundException;

See

Similar blocks of code found in 2 locations. Consider refactoring.
Open

            if (mdReaderUi.getAgentID() > 0) {
                String matchingIDs = "" + mdReaderUi.getAgentID();
                ResultSet rs = DBKernel.getResultSet(db.getConnection(), "SELECT \"CodeSystem\",\"Code\" FROM " + DBKernel.delimitL("Codes_Agenzien") +
                        " WHERE \"Basis\" = " + mdReaderUi.getAgentID(), false);
                if (rs != null && rs.first()) {
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 170..196

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 312.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

            if (mdReaderUi.getMatrixID() > 0) {
                String matchingIDs = "" + mdReaderUi.getMatrixID();
                ResultSet rs = DBKernel.getResultSet(db.getConnection(), "SELECT \"CodeSystem\",\"Code\" FROM " + DBKernel.delimitL("Codes_Matrices") +
                        " WHERE \"Basis\" = " + mdReaderUi.getMatrixID(), false);
                if (rs != null && rs.first()) {
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 141..167

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 312.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Identical blocks of code found in 3 locations. Consider refactoring.
Open

                for (int i=0;i<pars.length;i++) {
                    DoubleTextField[] dbl = new DoubleTextField[2];
                    dbl[0] = new DoubleTextField(true);
                    dbl[1] = new DoubleTextField(true);
                    if (!mins[i].equals("null")) dbl[0].setValue(Double.parseDouble(mins[i]));
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EstimatedModelReaderNodeDialog.java on lines 184..191
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/timeseriesreader/TimeSeriesReaderNodeDialog.java on lines 146..153

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 144.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        if (defTemp != null && !defTemp.isNaN() && !defTemp.isInfinite()) {
            DoubleTextField[] dtf = params.get(AttributeUtilities.ATT_TEMPERATURE);
            if (dtf == null) {
                dtf = new DoubleTextField[2];
                dtf[0] = new DoubleTextField(true); dtf[1] = new DoubleTextField(true);
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 629..638

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 134.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        if (defPh != null && !defPh.isNaN() && !defPh.isInfinite()) {
            DoubleTextField[] dtf = params.get(AttributeUtilities.ATT_PH);
            if (dtf == null) {
                dtf = new DoubleTextField[2];
                dtf[0] = new DoubleTextField(true); dtf[1] = new DoubleTextField(true);
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 619..628

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 134.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Identical blocks of code found in 2 locations. Consider refactoring.
Open

            for (String par : params.keySet()) {
                DoubleTextField[] dbl = params.get(par);
                pars[i] = par;
                mins[i] = ""+dbl[0].getValue();
                maxs[i] = ""+dbl[1].getValue();
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/timeseriesreader/TimeSeriesReaderNodeDialog.java on lines 111..117

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 86.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        if (defMatrix != null) {
            //c.getConfig("MdReaderUi").addInt(MdReaderUi.PARAM_MATRIXID, defMatrix);
            mdReaderUi.setMatrixID(defMatrix);
            mdReaderUi.setMatrixString(""+DBKernel.getValue(db.getConnection(), "Matrices", "ID", defMatrix+"", "Matrixname"));
        }
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 609..613

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 48.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        if (defAgent != null) {
            //c.getConfig("MdReaderUi").addInt(MdReaderUi.PARAM_AGENTID, defAgent);
            mdReaderUi.setAgensID(defAgent);
            mdReaderUi.setAgentString(""+DBKernel.getValue(db.getConnection(), "Agenzien", "ID", defAgent+"", "Agensname"));
        }
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 614..618

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 48.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 3 locations. Consider refactoring.
Open

                    for (String s : tr.getTempParam().values()) {
                        if (defTemp != null && !defTemp.isNaN()) set.getParamXValues().put(s, defTemp);
                        //if (dtf != null) where += getWhereCondition(level, "Temperatur", s, dtf[0].getValue(), dtf[1].getValue());                            
                    }
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 257..260
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 262..265

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 42.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 3 locations. Consider refactoring.
Open

                    for (String s : tr.getPhParam().values()) {
                        if (defPh != null && !defPh.isNaN()) set.getParamXValues().put(s, defPh);
                        //if (dtf != null) where += getWhereCondition(level, "pH", s, dtf[0].getValue(), dtf[1].getValue());                            
                    }
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 252..255
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 257..260

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 42.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 3 locations. Consider refactoring.
Open

                    for (String s : tr.getAwParam().values()) {
                        if (defAw != null && !defAw.isNaN()) set.getParamXValues().put(s, defAw);
                        //if (dtf != null) where += getWhereCondition(level, "aw", s, dtf[0].getValue(), dtf[1].getValue());                            
                    }
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 252..255
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/estimatedmodelreader/EmReaderUi.java on lines 262..265

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 42.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

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