de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/modelanddatajoiner/ModelAndDataJoinerNodeModel.java
/*******************************************************************************
* Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*
* Contributors:
* Department Biological Safety - BfR
*******************************************************************************/
package de.bund.bfr.knime.pmm.modelanddatajoiner;
import java.io.File;
import java.io.IOException;
import org.knime.core.data.DataTableSpec;
import org.knime.core.node.BufferedDataTable;
import org.knime.core.node.CanceledExecutionException;
import org.knime.core.node.ExecutionContext;
import org.knime.core.node.ExecutionMonitor;
import org.knime.core.node.InvalidSettingsException;
import org.knime.core.node.NodeModel;
import org.knime.core.node.NodeSettingsRO;
import org.knime.core.node.NodeSettingsWO;
import de.bund.bfr.knime.pmm.common.generictablemodel.KnimeSchema;
import de.bund.bfr.knime.pmm.common.pmmtablemodel.SchemaFactory;
/**
* This is the model implementation of ModelAndDataJoiner.
*
*
* @author Christian Thoens
*/
public class ModelAndDataJoinerNodeModel extends NodeModel {
private SettingsHelper set;
/**
* Constructor for the node model.
*/
protected ModelAndDataJoinerNodeModel() {
super(2, 1);
set = new SettingsHelper();
}
/**
* {@inheritDoc}
*/
@Override
protected BufferedDataTable[] execute(final BufferedDataTable[] inData,
final ExecutionContext exec) throws Exception {
Joiner joiner = null;
if (set.getJoinType().equals(SettingsHelper.PRIMARY_JOIN)) {
joiner = new PrimaryJoiner(inData[0], inData[1]);
} else if (set.getJoinType().equals(SettingsHelper.SECONDARY_JOIN)) {
joiner = new SecondaryJoiner(inData[0], inData[1]);
} else if (set.getJoinType().equals(SettingsHelper.COMBINED_JOIN)) {
joiner = new CombinedJoiner(inData[0], inData[1]);
}
return new BufferedDataTable[] { joiner.getOutputTable(
set.getAssignments(), exec) };
}
/**
* {@inheritDoc}
*/
@Override
protected void reset() {
}
/**
* {@inheritDoc}
*/
@Override
protected DataTableSpec[] configure(final DataTableSpec[] inSpecs)
throws InvalidSettingsException {
KnimeSchema outSchema = null;
boolean conformsPrimary = SchemaFactory.conformsM1Schema(inSpecs[0])
&& SchemaFactory.conformsDataSchema(inSpecs[1]);
boolean switchPrimary = SchemaFactory.conformsM1Schema(inSpecs[1])
&& SchemaFactory.conformsDataSchema(inSpecs[0]);
boolean conformsSecondary = SchemaFactory.conformsM2Schema(inSpecs[0])
&& SchemaFactory.conformsM1DataSchema(inSpecs[1]);
boolean switchSecondary = SchemaFactory.conformsM2Schema(inSpecs[1])
&& SchemaFactory.conformsM1DataSchema(inSpecs[0]);
boolean conformsCombined = SchemaFactory.conformsM12Schema(inSpecs[0])
&& SchemaFactory.conformsDataSchema(inSpecs[1]);
boolean switchCombined = SchemaFactory.conformsM12Schema(inSpecs[1])
&& SchemaFactory.conformsDataSchema(inSpecs[0]);
if (set.getJoinType().equals(SettingsHelper.NO_JOIN)) {
if (conformsPrimary || conformsSecondary || conformsCombined) {
throw new InvalidSettingsException("Node has to be configured!");
} else if (switchPrimary || switchSecondary || switchCombined) {
throw new InvalidSettingsException("Please switch the ports!");
} else {
throw new InvalidSettingsException("Wrong input!");
}
} else if (set.getJoinType().equals(SettingsHelper.PRIMARY_JOIN)) {
if (conformsPrimary) {
outSchema = SchemaFactory.createM1DataSchema();
} else if (switchPrimary) {
throw new InvalidSettingsException("Please switch the ports!");
} else {
throw new InvalidSettingsException("Wrong input!");
}
} else if (set.getJoinType().equals(SettingsHelper.SECONDARY_JOIN)) {
if (conformsSecondary) {
outSchema = SchemaFactory.createM12DataSchema();
} else if (switchSecondary) {
throw new InvalidSettingsException("Please switch the ports!");
} else {
throw new InvalidSettingsException("Wrong input!");
}
} else if (set.getJoinType().equals(SettingsHelper.COMBINED_JOIN)) {
if (conformsCombined) {
outSchema = SchemaFactory.createM12DataSchema();
} else if (switchCombined) {
throw new InvalidSettingsException("Please switch the ports!");
} else {
throw new InvalidSettingsException("Wrong input!");
}
}
return new DataTableSpec[] { outSchema.createSpec() };
}
/**
* {@inheritDoc}
*/
@Override
protected void saveSettingsTo(final NodeSettingsWO settings) {
set.saveSettings(settings);
}
/**
* {@inheritDoc}
*/
@Override
protected void loadValidatedSettingsFrom(final NodeSettingsRO settings)
throws InvalidSettingsException {
set.loadSettings(settings);
}
/**
* {@inheritDoc}
*/
@Override
protected void validateSettings(final NodeSettingsRO settings)
throws InvalidSettingsException {
}
/**
* {@inheritDoc}
*/
@Override
protected void loadInternals(final File internDir,
final ExecutionMonitor exec) throws IOException,
CanceledExecutionException {
}
/**
* {@inheritDoc}
*/
@Override
protected void saveInternals(final File internDir,
final ExecutionMonitor exec) throws IOException,
CanceledExecutionException {
}
}