SiLeBAT/FSK-Lab

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File rst.js has 455 lines of code (exceeds 250 allowed). Consider refactoring.
Open

// CodeMirror, copyright (c) by Marijn Haverbeke and others
// Distributed under an MIT license: https://codemirror.net/LICENSE

(function(mod) {
  if (typeof exports == "object" && typeof module == "object") // CommonJS
Severity: Minor
Found in de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/rst/rst.js - About 6 hrs to fix

Method doSwitch has a Cognitive Complexity of 45 (exceeds 5 allowed). Consider refactoring.
Open

    @Override
    protected T doSwitch(int classifierID, EObject theEObject) {
        switch (classifierID) {
            case MetadataPackage.GENERAL_INFORMATION: {
                GeneralInformation generalInformation = (GeneralInformation)theEObject;

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method getViewRepresentation has a Cognitive Complexity of 45 (exceeds 5 allowed). Consider refactoring.
Open

  @Override
  public JoinerViewRepresentation getViewRepresentation() {

    JoinerViewRepresentation representation;

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method doImport has 172 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    public String doImport(final String filename, final JProgressBar progress, final boolean showResults) {
        //filename = "C:/Users/Armin/Documents/private/freelance/BfR/Data/100711/RIS-ExportReferenceManagerTest.txt";
      Runnable runnable = new Runnable() {
      public void run() {
        try {
Severity: Major
Found in org.hsh.bfr.db/src/org/hsh/bfr/db/imports/custom/MyRisImporter.java - About 6 hrs to fix

File MyRisImporter.java has 452 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*******************************************************************************
 * Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
Severity: Minor
Found in org.hsh.bfr.db/src/org/hsh/bfr/db/imports/custom/MyRisImporter.java - About 6 hrs to fix

Reference has 49 methods (exceeds 20 allowed). Consider refactoring.
Open

@javax.annotation.Generated(value = "io.swagger.codegen.languages.JavaClientCodegen", date = "2019-07-12T14:55:16.594+02:00")
public class Reference {
  @SerializedName("isReferenceDescription")
  private Boolean isReferenceDescription = null;

File ParameterImpl.java has 451 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/**
 */
package metadata.impl;

import metadata.MetadataPackage;

Function bind has 170 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  Results.prototype.bind = function (container, $container) {
    var self = this;

    var id = container.id + '-results';

Severity: Major
Found in de.bund.bfr.knime.js/src/js/lib/select2.full.js - About 6 hrs to fix

File haxe.js has 449 lines of code (exceeds 250 allowed). Consider refactoring.
Open

// CodeMirror, copyright (c) by Marijn Haverbeke and others
// Distributed under an MIT license: https://codemirror.net/LICENSE

(function(mod) {
  if (typeof exports == "object" && typeof module == "object") // CommonJS
Severity: Minor
Found in de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/haxe/haxe.js - About 6 hrs to fix

Method loadFSKPortObject has 169 lines of code (exceeds 25 allowed). Consider refactoring.
Open

        @SuppressWarnings("unchecked")
        public FskPortObject loadFSKPortObject(PortObjectZipInputStream in, PortObjectSpec spec, ExecutionMonitor exec)
                throws IOException, CanceledExecutionException {

            String modelScript = "";

Function _generateHTML has 169 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    _generateHTML: function(inst) {
        var maxDraw, prevText, prev, nextText, next, currentText, gotoDate,
            controls, buttonPanel, firstDay, showWeek, dayNames, dayNamesMin,
            monthNames, monthNamesShort, beforeShowDay, showOtherMonths,
            selectOtherMonths, defaultDate, html, dow, row, group, col, selectedDate,

File ReaderNodeModel.java has 448 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*
 ***************************************************************************************************
 * Copyright (c) 2017 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify it under the terms of the

Method checkeDoppeltVergebeneDKZs has a Cognitive Complexity of 44 (exceeds 5 allowed). Consider refactoring.
Open

    private void checkeDoppeltVergebeneDKZs(final Statement anfrage) {
        System.err.println("checkeDoppeltVergebeneDKZs - Start");
        LinkedHashMap<String, MyTable> myTables = DBKernel.myDBi.getAllTables();
        Hashtable<Integer, String> hash = new Hashtable<>();
        for(String key : myTables.keySet()) {
Severity: Minor
Found in org.hsh.bfr.db/src/org/hsh/bfr/db/MergeDBsAPriori.java - About 6 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method getReihenfolge has a Cognitive Complexity of 44 (exceeds 5 allowed). Consider refactoring.
Open

        private Vector<Integer> getReihenfolge(Vector<Integer[]> org_dst) {
            Vector<Integer> indexReihenfolge = new Vector<>();
            Integer[] int2 = org_dst.get(0);
            int[] valsA = new int[2];
            int[] valsE = new int[2];

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method generateJoinerRelationAdvanced has a Cognitive Complexity of 44 (exceeds 5 allowed). Consider refactoring.
Open

  public static List<JoinRelationAdvanced> generateJoinerRelationAdvanced(FskPortObject portObject,
      LinkedHashMap<String, Object[]> originalNamesMap, List<Parameter> topLevelJoinedModelParams, List<JoinRelation> joinRelations,
       AtomicInteger index, List<JoinRelationAdvanced> joinRelationList, LinkedHashMap<String, String> ModelsToSuffixMap, List<JoinRelation> foundRelation) {
    if (joinRelationList == null) {
      joinRelationList = new ArrayList<>();

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method getValueAt has a Cognitive Complexity of 44 (exceeds 5 allowed). Consider refactoring.
Open

        @Override
        public Object getValueAt(int row, int column) {
            switch (column) {
            case 0:
                return ids.get(row);

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method loadSettings has 168 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    public void loadSettings(NodeSettingsRO settings) {
        try {
            fileName = settings.getString(CFG_FILE_NAME);
        } catch (InvalidSettingsException e) {
        }

Method generateStatUpModellTables has 168 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    @SuppressWarnings("unchecked")
    private void generateStatUpModellTables(final MyTable literatur, final MyTable tenazity_raw_data, final LinkedHashMap<Object, String> hashZeit, final MyTable Konzentrationseinheiten, LinkedHashMap<Boolean, String> hYNB) {
        MyTable PMMLabWorkflows = new MyTable("PMMLabWorkflows", new String[]{"Workflow"},
                new String[]{"BLOB(100M)"},
                new String[]{null},
Severity: Major
Found in org.hsh.bfr.db/src/org/hsh/bfr/db/MyDBTablesNew.java - About 6 hrs to fix

Method loadFSKPortObject has 168 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    @SuppressWarnings("unchecked")
    public FskPortObject loadFSKPortObject(PortObjectZipInputStream in, PortObjectSpec spec,
        ExecutionMonitor exec) throws IOException, CanceledExecutionException {

      String modelScript = "";

Method importBufferedDataTable has 168 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  @Override
  public BufferedDataTable importBufferedDataTable(String varName, boolean nonNumbersAsMissing,
      ExecutionContext exec) throws RException, CanceledExecutionException {

    final REXP typeRexp = eval("class(" + varName + ")", true);
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