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Function bind has 75 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  Search.prototype.bind = function (decorated, container, $container) {
    var self = this;

    decorated.call(this, container, $container);
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-lib/select2/4_0_3/debug/js/select2.js - About 3 hrs to fix

Function _mouseDrag has 75 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    _mouseDrag: function(event) {
        var i, item, itemElement, intersection,
            o = this.options,
            scrolled = false;
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js - About 3 hrs to fix

Function _mouseStart has 75 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    _mouseStart: function(event, overrideHandle, noActivation) {

        var i, body,
            o = this.options;
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js - About 3 hrs to fix

Function inputHandler has 75 lines of code (exceeds 25 allowed). Consider refactoring.
Open

        function inputHandler(e,value) {
            var a, b, i, val = this.value;
            /*
             * close any already open lists of autocompleted
             * values
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/js-src/de/bund/bfr/knime/fsklab/nodes/joiner/joiner.js - About 3 hrs to fix

Function 43 has 75 lines of code (exceeds 25 allowed). Consider refactoring.
Open

},{}],43:[function(require,module,exports){
'use strict';

var traverse = module.exports = function (schema, opts, cb) {
  // Legacy support for v0.3.1 and earlier.
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/js-src/de/bund/bfr/knime/fsklab/nodes/joiner/emfbundle/ajv.min.js - About 3 hrs to fix

Function template has 75 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    function template(string, options, otherOptions) {
      // Based on John Resig's `tmpl` implementation (http://ejohn.org/blog/javascript-micro-templating/)
      // and Laura Doktorova's doT.js (https://github.com/olado/doT).
      var settings = lodash.templateSettings;
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/js-src/de/bund/bfr/knime/fsklab/nodes/joiner/jointjs/lodash.min.js - About 3 hrs to fix

Similar blocks of code found in 2 locations. Consider refactoring.
Open

            child.to = {
                height: c_original.height * factor.to.y,
                width: c_original.width * factor.to.x,
                outerHeight: c_original.height * factor.to.y,
                outerWidth: c_original.width * factor.to.x
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js and 1 other location - About 3 hrs to fix
de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js on lines 16175..16180

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 95.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

       clear: function() {
          this.$input.data('datetimepicker').date = null;
          this.$input.find('.active').removeClass('active');
          if(!this.options.showbuttons) {
             this.$input.closest('form').submit();
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-lib/bootstrap-editable/1_5_1/debug/js/bootstrap-editable.js and 1 other location - About 3 hrs to fix
de.bund.bfr.knime.pmm.nodes/js-lib/bootstrap-editable/1_5_1/debug/js/bootstrap-editable.js on lines 6293..6299

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 95.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        if ( factor.from.x !== factor.to.x ) {
            props = props.concat( hProps );
            el.from = $.effects.setTransition( el, hProps, factor.from.x, el.from );
            el.to = $.effects.setTransition( el, hProps, factor.to.x, el.to );
        }
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js and 1 other location - About 3 hrs to fix
de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js on lines 16115..16119

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 95.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        if ( factor.from.y !== factor.to.y ) {
            props = props.concat( vProps );
            el.from = $.effects.setTransition( el, vProps, factor.from.y, el.from );
            el.to = $.effects.setTransition( el, vProps, factor.to.y, el.to );
        }
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js and 1 other location - About 3 hrs to fix
de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js on lines 16122..16126

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 95.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

            child.from = {
                height: c_original.height * factor.from.y,
                width: c_original.width * factor.from.x,
                outerHeight: c_original.outerHeight * factor.from.y,
                outerWidth: c_original.outerWidth * factor.from.x
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js and 1 other location - About 3 hrs to fix
de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js on lines 16181..16186

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 95.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        clear:  function() {
            this.$input.data('datepicker').date = null;
            this.$input.find('.active').removeClass('active');
            if(!this.options.showbuttons) {
                this.$input.closest('form').submit();
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-lib/bootstrap-editable/1_5_1/debug/js/bootstrap-editable.js and 1 other location - About 3 hrs to fix
de.bund.bfr.knime.pmm.nodes/js-lib/bootstrap-editable/1_5_1/debug/js/bootstrap-editable.js on lines 6627..6633

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 95.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Identical blocks of code found in 2 locations. Consider refactoring.
Open

    public OtherModelScope retrieveScope(Sheet sheet) {

        OtherModelScope scope = new OtherModelScope();
Severity: Major
Found in de.bund.bfr.knime.fsklab.metadata.model/src/metadata/SwaggerOtherModelSheetImporter.java and 1 other location - About 3 hrs to fix
de.bund.bfr.knime.fsklab.metadata.model/src/metadata/SwaggerDataModelSheetImporter.java on lines 239..280

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 188.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Identical blocks of code found in 2 locations. Consider refactoring.
Open

    public GenericModelScope retrieveScope(Sheet sheet) {
    
        GenericModelScope scope = new GenericModelScope();

        for (int numrow = SCOPE_PRODHAZPOP_ROW; numrow <= (SCOPE_PRODHAZPOP_ROW + 11); numrow++) {
Severity: Major
Found in de.bund.bfr.knime.fsklab.metadata.model/src/metadata/SwaggerDataModelSheetImporter.java and 1 other location - About 3 hrs to fix
de.bund.bfr.knime.fsklab.metadata.model/src/metadata/SwaggerOtherModelSheetImporter.java on lines 322..363

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 188.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

File SecondaryPredictorViewNodeDialog.java has 290 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*******************************************************************************
 * Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/secondarypredictorview/SecondaryPredictorViewNodeDialog.java - About 2 hrs to fix

Method tableMouseClicked has 74 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private void tableMouseClicked(MouseEvent e) {
        if (SwingUtilities.isLeftMouseButton(e)) {
            /*
             * int row = table.getSelectedRow(); int col =
             * table.getSelectedColumn();
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/manualmodelconf/ui/MMC_M.java - About 2 hrs to fix

Method parse has 74 lines of code (exceeds 25 allowed). Consider refactoring.
Open

        private static ManualSecondaryModel parse(KnimeTuple tuple, boolean isPMFX, String mdName, int mdNum,
                Metadata metadata, String notes) {

            final String modelExtension = isPMFX ? "pmf" : "sbml";
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/common/writer/WriterUtils.java - About 2 hrs to fix

Method execute has 74 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    protected BufferedDataTable[] execute(final BufferedDataTable[] inData, final ExecutionContext exec)
            throws Exception {
        KnimeSchema schema = null;
        ModelType modelType = null;
        List<KnimeTuple> tuples;
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/pmfwriter/PMFWriterNodeModel.java - About 2 hrs to fix

Method loadHashes has 74 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private void loadHashes() {        
        LinkedHashMap<Object, String> hashZeit = new LinkedHashMap<>();
        hashZeit.put("Sekunde", DBKernel.getLanguage().equals("en") ? "Second(s)" : "Sekunde(n) [s][sec]");                    
        hashZeit.put("Minute", DBKernel.getLanguage().equals("en") ? "Minute(s)" : "Minute(n)");                    
        hashZeit.put("Stunde", DBKernel.getLanguage().equals("en") ? "Hour(s)" : "Stunde(n)");
Severity: Major
Found in org.hsh.bfr.db/src/org/hsh/bfr/db/MyDBTablesNew.java - About 2 hrs to fix

Method execute has 74 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  @Override
  protected PortObject[] execute(final PortObject[] inData, final ExecutionContext exec)
      throws CombineArchiveException, REXPMismatchException, RException, InvalidPathException,
      IOException, NoInternetException {
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-prerakip/de/bund/bfr/knime/pmm/fskx/reader/FskxReaderNodeModel.java - About 2 hrs to fix
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