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Showing 14,752 of 14,752 total issues

Function d3_time_interval has 46 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  function d3_time_interval(local, step, number) {
    function round(date) {
      var d0 = local(date), d1 = offset(d0, 1);
      return date - d0 < d1 - date ? d0 : d1;
    }
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/d3.js - About 1 hr to fix

Function _generatePosition has 46 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    _generatePosition: function(event) {

        var top, left,
            o = this.options,
            pageX = event.pageX,
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js - About 1 hr to fix

Function bridge has 46 lines of code (exceeds 25 allowed). Consider refactoring.
Open

$.widget.bridge = function( name, object ) {
    var fullName = object.prototype.widgetFullName || name;
    $.fn[ name ] = function( options ) {
        var isMethodCall = typeof options === "string",
            args = widget_slice.call( arguments, 1 ),
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js - About 1 hr to fix

Function _toggle has 46 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    _toggle: function( event, eventData ) {
        var that = this,
            toShow = eventData.newPanel,
            toHide = eventData.oldPanel;
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js - About 1 hr to fix

Function fold has 46 lines of code (exceeds 25 allowed). Consider refactoring.
Open

var effectFold = $.effects.effect.fold = function( o, done ) {

    // Create element
    var el = $( this ),
        props = [ "position", "top", "bottom", "left", "right", "height", "width" ],
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js - About 1 hr to fix

Function _createWrapper has 46 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    _createWrapper: function() {
        this.uiDialog = $("<div>")
            .addClass( "ui-dialog ui-widget ui-widget-content ui-corner-all ui-front " +
                this.options.dialogClass )
            .hide()
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/jquery-ui.js - About 1 hr to fix

Function parse$$1 has 46 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    parse: function parse$$1(components, options) {
        var mailtoComponents = components;
        var to = mailtoComponents.to = mailtoComponents.path ? mailtoComponents.path.split(",") : [];
        mailtoComponents.path = undefined;
        if (mailtoComponents.query) {
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/js-src/de/bund/bfr/knime/fsklab/nodes/joiner/emfbundle/ajv.min.js - About 1 hr to fix

Identical blocks of code found in 2 locations. Consider refactoring.
Open

      for (String packageName : portObject.packages) {
        String command = scriptHandler.getPackageVersionCommand(packageName);

        try {
          String packageVersion = scriptHandler.runScript(command, exec, true)[0];
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_9_0/de/bund/bfr/knime/fsklab/v1_9/writer/WriterNodeModel.java and 1 other location - About 1 hr to fix
de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/v2_0/writer/WriterNodeModel.java on lines 477..492

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 120.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Identical blocks of code found in 2 locations. Consider refactoring.
Open

  static {
    // model type strings
    modelTypeStrings = new LinkedHashMap<>();
    modelTypeStrings.put(ModelType.EXPERIMENTAL_DATA, "Experimental data");
    modelTypeStrings.put(ModelType.PRIMARY_MODEL_WDATA, "Primary model with data");
Severity: Major
Found in de.bund.bfr.knime.fsklab.nodes.common/src/de/bund/bfr/knime/fsklab/nodes/common/ui/MetaDataPane2.java and 1 other location - About 1 hr to fix
de.bund.bfr.knime.fsklab.nodes.common/src/de/bund/bfr/knime/fsklab/nodes/common/ui/MetaDataPane.java on lines 34..46

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 120.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Identical blocks of code found in 2 locations. Consider refactoring.
Open

  static {
    // model type strings
    modelTypeStrings = new LinkedHashMap<>();
    modelTypeStrings.put(ModelType.EXPERIMENTAL_DATA, "Experimental data");
    modelTypeStrings.put(ModelType.PRIMARY_MODEL_WDATA, "Primary model with data");
Severity: Major
Found in de.bund.bfr.knime.fsklab.nodes.common/src/de/bund/bfr/knime/fsklab/nodes/common/ui/MetaDataPane.java and 1 other location - About 1 hr to fix
de.bund.bfr.knime.fsklab.nodes.common/src/de/bund/bfr/knime/fsklab/nodes/common/ui/MetaDataPane2.java on lines 55..67

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 120.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Identical blocks of code found in 2 locations. Consider refactoring.
Open

                if (visible == null || (visible instanceof Boolean && (Boolean) visible)) {
                    takeIt = modelClass == null || modelClass.equals("All");
                    if (!takeIt) {
                        Object cls = DBKernel.getValue(conn, "Modellkatalog", "ID", modelID + "", "Klasse");
                        String mcls = DBKernel.myDBi.getHashMap("ModelType").get(cls);
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/modelcatalogreader/ModelCatalogReaderNodeModel.java and 1 other location - About 1 hr to fix
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/modelcatalogreader/ModelCatalogReaderNodeModel.java on lines 138..146

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 120.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Identical blocks of code found in 2 locations. Consider refactoring.
Open

      for (String packageName : portObject.packages) {
        String command = scriptHandler.getPackageVersionCommand(packageName);

        try {
          String packageVersion = scriptHandler.runScript(command, exec, true)[0];
Severity: Major
Found in de.bund.bfr.knime.fsklab.nodes/src/de/bund/bfr/knime/fsklab/v2_0/writer/WriterNodeModel.java and 1 other location - About 1 hr to fix
de.bund.bfr.knime.fsklab.deprecatednodes/src-1_9_0/de/bund/bfr/knime/fsklab/v1_9/writer/WriterNodeModel.java on lines 385..400

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 120.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Identical blocks of code found in 2 locations. Consider refactoring.
Open

                if (visible == null || (visible instanceof Boolean && (Boolean) visible)) {
                    takeIt = modelClass == null || modelClass.equals("All");
                    if (!takeIt) {
                        Object cls = DBKernel.getValue(conn, "Modellkatalog", "ID", modelID + "", "Klasse");
                        String mcls = DBKernel.myDBi.getHashMap("ModelType").get(cls);
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/modelcatalogreader/ModelCatalogReaderNodeModel.java and 1 other location - About 1 hr to fix
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/modelcatalogreader/ModelCatalogReaderNodeModel.java on lines 219..227

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 120.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

                        if (key != null && foreignDbIds.containsKey(key)) {
                            if (before) {
                                liDB.id = foreignDbIds.get(key); // schemaTuple.addValue(attr,
                                                                    // foreignDbIds.get(key));
                                fromToXmlDB.set(i, liDB);
Severity: Major
Found in de.bund.bfr.knime.pmm.common/src/de/bund/bfr/knime/pmm/common/CellIO.java and 1 other location - About 1 hr to fix
de.bund.bfr.knime.pmm.common/src/de/bund/bfr/knime/pmm/common/CellIO.java on lines 425..440

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 120.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        if (set.getSelectedID() != null
                && reader.getPlotables().get(set.getSelectedID()) != null) {
            Plotable plotable = reader.getPlotables().get(set.getSelectedID());

            configPanel.setParameters(plotable.getFunctionValue(),
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/fittedparameterview/FittedParameterViewNodeDialog.java and 1 other location - About 1 hr to fix
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/secondarypredictorview/SecondaryPredictorViewNodeDialog.java on lines 153..165

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 120.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

                        if (key != null && foreignDbIds.containsKey(key)) {
                            if (before) {
                                mx2DB.id = foreignDbIds.get(key); // schemaTuple.addValue(attr,
                                                                    // foreignDbIds.get(key));
                                fromToXmlDB.set(i, mx2DB);
Severity: Major
Found in de.bund.bfr.knime.pmm.common/src/de/bund/bfr/knime/pmm/common/CellIO.java and 1 other location - About 1 hr to fix
de.bund.bfr.knime.pmm.common/src/de/bund/bfr/knime/pmm/common/CellIO.java on lines 487..502

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 120.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        if (set.getSelectedID() != null
                && reader.getPlotables().get(set.getSelectedID()) != null) {
            Plotable plotable = reader.getPlotables().get(set.getSelectedID());

            configPanel.setParameters(plotable.getFunctionValue(),
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/secondarypredictorview/SecondaryPredictorViewNodeDialog.java and 1 other location - About 1 hr to fix
de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/fittedparameterview/FittedParameterViewNodeDialog.java on lines 114..126

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 120.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Method retrieveContact has 45 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private Contact retrieveContact(Row row, Map<String, Integer> columns) {

        String x = row.getCell(L).getStringCellValue();
        x= row.getCell(AA).getStringCellValue();
        x= row.getCell(AE).getStringCellValue();
Severity: Minor
Found in de.bund.bfr.knime.fsklab.metadata.model/src/metadata/SwaggerSheetImporter.java - About 1 hr to fix

Method retrieveContact has 45 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    public static Contact retrieveContact(Row row, Map<String, Integer> columns) {

        // Check mandatory properties and throw exception if missing
        if (row.getCell(columns.get("mail")).getCellTypeEnum() == CellType.BLANK) {
            throw new IllegalArgumentException("Missing mail");
Severity: Minor
Found in de.bund.bfr.knime.fsklab.metadata.model/src/metadata/swagger/ImporterUtils.java - About 1 hr to fix

Method retrieveContact has 45 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    private Contact retrieveContact(Row row, Map<String, Integer> columns) {

        String x = row.getCell(L).getStringCellValue();
        x= row.getCell(AA).getStringCellValue();
        x= row.getCell(AE).getStringCellValue();
Severity: Minor
Found in de.bund.bfr.knime.fsklab.metadata.model/src/metadata/SwaggerGenericSheetImporter.java - About 1 hr to fix
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