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Function create_body has 578 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    function create_body(different) {
        $.ajaxSetup({
            cache : true
        });
        document.createElement("body");
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/js-src/de/bund/bfr/knime/fsklab/nodes/joiner/joiner.js - About 2 days to fix

Method transformFormat has a Cognitive Complexity of 142 (exceeds 5 allowed). Consider refactoring.
Open

    private void transformFormat(HSSFWorkbook wb, HSSFWorkbook wbNew) {
        HSSFSheet transactionSheet = wb.getSheet("Transactions");
        HSSFSheet businessSheet = wb.getSheet("Business_List");
        int numRows = transactionSheet.getLastRowNum() + 1;
        HSSFSheet transactionSheetNew = wbNew.getSheet("NewTransactions");
Severity: Minor
Found in org.hsh.bfr.db/src/org/hsh/bfr/db/imports/custom/LieferkettenImporterEFSA.java - About 2 days to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method initComponents has 574 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    @SuppressWarnings({"serial"})
    private void initComponents() {
        // JFormDesigner - Component initialization - DO NOT MODIFY  //GEN-BEGIN:initComponents
        // Generated using JFormDesigner non-commercial license
        panel3 = new JPanel();
Severity: Major
Found in de.bund.bfr.knime.foodprocess/src/de/bund/bfr/knime/foodprocess/ui/FoodProcessUi.java - About 2 days to fix

Method readFskPortObject has a Cognitive Complexity of 141 (exceeds 5 allowed). Consider refactoring.
Open

  private FskPortObject readFskPortObject(CombineArchive archive, List<String> ListOfPaths,
      int readLevel, File currentWorkingDirectory) throws Exception {
    Map<String, URI> URIS = FSKML.getURIS(1, 0, 12);
    // each sub Model has it's own working directory to avoid resource conflict.
    // get current node's and workflow's context
Severity: Minor
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_7_2/de/bund/bfr/knime/fsklab/nodes/v1_7_2/reader/ReaderNodeModel.java - About 2 days to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method getChart has a Cognitive Complexity of 141 (exceeds 5 allowed). Consider refactoring.
Open

    public JFreeChart getChart(List<String> idsToPaint) {
        if (paramX == null || paramY == null) {
            return new JFreeChart(null, JFreeChart.DEFAULT_TITLE_FONT,
                    new XYPlot(), showLegend);
        }
Severity: Minor
Found in de.bund.bfr.knime.pmm.common/src/de/bund/bfr/knime/pmm/common/chart/ChartCreator.java - About 2 days to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

File RController.java has 1113 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*
 * ------------------------------------------------------------------ Copyright by KNIME GmbH,
 * Konstanz, Germany Website: http://www.knime.org; Email: contact@knime.org
 *
 * This program is free software; you can redistribute it and/or modify it under the terms of the
Severity: Major
Found in de.bund.bfr.knime.fsklab.r/src/de/bund/bfr/knime/fsklab/r/client/RController.java - About 2 days to fix

Similar blocks of code found in 2 locations. Consider refactoring.
Open

    get metaData() {

        // generalInformation
        this._metadata.generalInformation = this.panels.generalInformation.data;
        this._metadata.generalInformation.author = this.panels.author.data;
Severity: Major
Found in de.bund.bfr.knime.js/src/js/app/app.schemas.js and 1 other location - About 2 days to fix
de.bund.bfr.knime.js/js-lib/bfr/fskutil_1.0.0.js on lines 1201..1230

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 489.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        get metaData() {

            // generalInformation
            this.metadata.generalInformation = this.panels.generalInformation.data;
            this.metadata.generalInformation.author = this.panels.author.data;
Severity: Major
Found in de.bund.bfr.knime.js/js-lib/bfr/fskutil_1.0.0.js and 1 other location - About 2 days to fix
de.bund.bfr.knime.js/src/js/app/app.schemas.js on lines 474..503

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 489.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Method passesFilter has a Cognitive Complexity of 139 (exceeds 5 allowed). Consider refactoring.
Open

    public static boolean passesFilter(
        final String matrixString,
        final String agentString,
        final String literatureString,
        int matrixID, int agentID, int literatureID,
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/timeseriesreader/MdReaderUi.java - About 2 days to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        if (callbackType === 'undefined' || callbackType === 'function') {
            //Pull out the defined dependencies and pass the ordered
            //values to the callback.
            //Default to [require, exports, module] if no deps
            deps = !deps.length && callback.length ? ['require', 'exports', 'module'] : deps;
Severity: Major
Found in de.bund.bfr.knime.js/src/js/lib/select2.full.js and 1 other location - About 2 days to fix
de.bund.bfr.knime.pmm.nodes/js-lib/select2/4_0_3/debug/js/select2.js on lines 328..377

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 485.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        if (callbackType === 'undefined' || callbackType === 'function') {
            //Pull out the defined dependencies and pass the ordered
            //values to the callback.
            //Default to [require, exports, module] if no deps
            deps = !deps.length && callback.length ? ['require', 'exports', 'module'] : deps;
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-lib/select2/4_0_3/debug/js/select2.js and 1 other location - About 2 days to fix
de.bund.bfr.knime.js/src/js/lib/select2.full.js on lines 332..381

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 485.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

/*
 * An XML document type.
 * Localname: Agent
 * Namespace: http://www.bfr.bund.de/PCML-1_0
 * Java type: de.bund.bfr.pcml10.AgentDocument
Severity: Major
Found in de.bund.bfr.knime.foodprocess.pcml/lib/src/de/bund/bfr/pcml10/impl/AgentDocumentImpl.java and 1 other location - About 2 days to fix
de.bund.bfr.knime.foodprocess.pcml/lib/src/de/bund/bfr/pcml10/impl/MatrixDocumentImpl.java on lines 1..469

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 1355.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

/*
 * An XML document type.
 * Localname: Matrix
 * Namespace: http://www.bfr.bund.de/PCML-1_0
 * Java type: de.bund.bfr.pcml10.MatrixDocument
Severity: Major
Found in de.bund.bfr.knime.foodprocess.pcml/lib/src/de/bund/bfr/pcml10/impl/MatrixDocumentImpl.java and 1 other location - About 2 days to fix
de.bund.bfr.knime.foodprocess.pcml/lib/src/de/bund/bfr/pcml10/impl/AgentDocumentImpl.java on lines 1..469

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 1355.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Function TouchSpin has 558 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  $.fn.TouchSpin = function(options) {

    var defaults = {
      min: 0, // If null, there is no minimum enforced
      max: null, // If null, there is no maximum enforced
Severity: Major
Found in de.bund.bfr.knime.js/src/js/lib/bootstrap-touchspin.js - About 2 days to fix

File ModelPlotterNodeModel.java has 1083 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*******************************************************************************
 * Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify it under the terms of the
 * GNU General Public License as published by the Free Software Foundation, either version 3 of the
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/js/modelplotter/modern/ModelPlotterNodeModel.java - About 2 days to fix

Function 3 has 546 lines of code (exceeds 25 allowed). Consider refactoring.
Open

},{"./expressions":3,"./fractions":4,"./helper":5}],3:[function(require,module,exports){
var Fraction = require('./fractions');
var isInt = require('./helper').isInt;
var GREEK_LETTERS = require('./helper').GREEK_LETTERS;
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/algebra-0.2.6.min.js - About 2 days to fix

Function createVars has 545 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    function createVars(){
       _WebRepositoryVars = {
        header          : {
            brand           : {
                title           : _representation.title // false or ''
Severity: Major
Found in de.bund.bfr.knime.fsklab.nodes/js-src/de/bund/bfr/knime/fsklab/v2.0/fskdbview/fskdbview.js - About 2 days to fix

File XLSModelReaderNodeDialog.java has 1052 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*******************************************************************************
 * Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/xlsmodelreader/XLSModelReaderNodeDialog.java - About 2 days to fix

Similar blocks of code found in 2 locations. Consider refactoring.
Open

    token: function(stream, state) {
      var ctx = state.context;
      if (stream.sol()) {
        if (ctx.align == null) ctx.align = false;
        state.indented = stream.indentation();
Severity: Major
Found in de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/ecl/ecl.js and 1 other location - About 2 days to fix
de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/vhdl/vhdl.js on lines 146..173

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 458.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

    token: function(stream, state) {
      var ctx = state.context;
      if (stream.sol()) {
        if (ctx.align == null) ctx.align = false;
        state.indented = stream.indentation();
Severity: Major
Found in de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/vhdl/vhdl.js and 1 other location - About 2 days to fix
de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/ecl/ecl.js on lines 161..188

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 458.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

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