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Showing 14,752 of 14,752 total issues

Method saveFSKPortObject has 102 lines of code (exceeds 25 allowed). Consider refactoring.
Open

        public void saveFSKPortObject(FskPortObject portObject, final PortObjectZipOutputStream out,
                final ExecutionMonitor exec) throws IOException {

            // First FSK Object
            // model entry (file with model script)
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/src-1_7_2/de/bund/bfr/knime/fsklab/CombinedFskPortObject.java - About 4 hrs to fix

Method drawAxisLine has 102 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    @Override
    protected void drawAxisLine(Graphics2D g2, double cursor,
            Rectangle2D dataArea, RectangleEdge edge) {
        Line2D axisLine = null;
        if (edge == RectangleEdge.TOP) {
Severity: Major
Found in de.bund.bfr.knime.foodprocess.view/src/de/bund/bfr/knime/foodprocess/view/MyXAxis.java - About 4 hrs to fix

Function quadtree has 102 lines of code (exceeds 25 allowed). Consider refactoring.
Open

  d3.geom.quadtree = function(points, x1, y1, x2, y2) {
    var x = d3_svg_lineX, y = d3_svg_lineY, compat;
    if (compat = arguments.length) {
      x = d3_geom_quadtreeCompatX;
      y = d3_geom_quadtreeCompatY;
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/d3.js - About 4 hrs to fix

Function addMetaData has 102 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    function addMetaData(modelObject) 
    {
        
        /*
         * Accordion needs a header followed by a div. We add a paragraph per parameter.
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/js-src/de/bund/bfr/knime/pmm/js/modelplotter/pmm-plotter.js - About 4 hrs to fix

Function _process_options has 102 lines of code (exceeds 25 allowed). Consider refactoring.
Open

        _process_options: function(opts){
            // Store raw options for reference
            this._o = $.extend({}, this._o, opts);
            // Processed options
            var o = this.o = $.extend({}, this._o);
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/js-src/bootstrap-datepicker/1_6_4/debug/js/bootstrap-datepicker.js - About 4 hrs to fix

Similar blocks of code found in 2 locations. Consider refactoring.
Open

package de.bund.bfr.knime.pmm.common.pmmtablemodel;

import static org.junit.Assert.assertEquals;

import org.junit.Test;
Severity: Major
Found in de.bund.bfr.knime.pmm.common.tests/src/de/bund/bfr/knime/pmm/common/pmmtablemodel/Model1SchemaTest.java and 1 other location - About 4 hrs to fix
de.bund.bfr.knime.pmm.common.tests/src/de/bund/bfr/knime/pmm/common/pmmtablemodel/TimeSeriesSchemaTest.java on lines 1..44

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 254.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

package de.bund.bfr.knime.pmm.common.pmmtablemodel;

import static org.junit.Assert.assertEquals;

import org.junit.Test;
Severity: Major
Found in de.bund.bfr.knime.pmm.common.tests/src/de/bund/bfr/knime/pmm/common/pmmtablemodel/TimeSeriesSchemaTest.java and 1 other location - About 4 hrs to fix
de.bund.bfr.knime.pmm.common.tests/src/de/bund/bfr/knime/pmm/common/pmmtablemodel/Model1SchemaTest.java on lines 1..44

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 254.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

File SecondaryModelDialog.java has 336 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*******************************************************************************
 * Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/xlsmodelreader/SecondaryModelDialog.java - About 4 hrs to fix

Similar blocks of code found in 3 locations. Consider refactoring.
Open

  function tokenString(stream, state) {
    var next, end = false, escaped = false;
    while ((next = stream.next()) != null) {
      if (next === '"' && !escaped) {
        end = true;
Severity: Major
Found in de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/mllike/mllike.js and 2 other locations - About 4 hrs to fix
de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/mathematica/mathematica.js on lines 133..146
de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/yacas/yacas.js on lines 136..149

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 116.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 3 locations. Consider refactoring.
Open

  function tokenString(stream, state) {
    var next, end = false, escaped = false;
    while ((next = stream.next()) != null) {
      if (next === '"' && !escaped) {
        end = true;
Severity: Major
Found in de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/mathematica/mathematica.js and 2 other locations - About 4 hrs to fix
de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/mllike/mllike.js on lines 110..123
de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/yacas/yacas.js on lines 136..149

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 116.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 3 locations. Consider refactoring.
Open

  function tokenString(stream, state) {
    var next, end = false, escaped = false;
    while ((next = stream.next()) != null) {
      if (next === '"' && !escaped) {
        end = true;
Severity: Major
Found in de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/yacas/yacas.js and 2 other locations - About 4 hrs to fix
de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/mathematica/mathematica.js on lines 133..146
de.bund.bfr.knime.js/js-lib/codemirror-5.49.2/mode/mllike/mllike.js on lines 110..123

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 116.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

        validate() {

            let isValid;
            if (!this.mandatory) {
                isValid = true;
Severity: Major
Found in de.bund.bfr.knime.js/js-lib/bfr/fskutil_1.0.0.js and 1 other location - About 4 hrs to fix
de.bund.bfr.knime.fsklab.deprecatednodes/js-src/de/bund/bfr/knime/fsklab/1.7.2/editor/editor.js on lines 2217..2233

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 116.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

    validate() {

      let isValid;
      if (!this.mandatory) {
        isValid = true;
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/js-src/de/bund/bfr/knime/fsklab/1.7.2/editor/editor.js and 1 other location - About 4 hrs to fix
de.bund.bfr.knime.js/js-lib/bfr/fskutil_1.0.0.js on lines 691..707

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 116.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Method createChart has 101 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    public void createChart() throws ConvertException {
        List<String> selectedIDs = null;

        if (configPanel.isDisplayFocusedRow()) {
            selectedIDs = Arrays.asList(selectionPanel.getFocusedID());
Severity: Major
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/predictorview/PredictorViewNodeDialog.java - About 4 hrs to fix

File MyChartCreator.java has 335 lines of code (exceeds 250 allowed). Consider refactoring.
Open

/*******************************************************************************
 * Copyright (c) 2015 Federal Institute for Risk Assessment (BfR), Germany
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
Severity: Minor
Found in de.bund.bfr.knime.foodprocess.view/src/de/bund/bfr/knime/foodprocess/view/MyChartCreator.java - About 4 hrs to fix

Function constructor has 101 lines of code (exceeds 25 allowed). Consider refactoring.
Open

    constructor( metadata, img , state ,  modelScript, visScript , readme ) {
        super( metadata, img , modelScript, visScript, readme ) ;
        this._schema = schemas.predictiveModel;
        if(state){
            this.panels = this._createPanels();
Severity: Major
Found in de.bund.bfr.knime.js/src/js/app/app.schemas.js - About 4 hrs to fix

Function 25 has 101 lines of code (exceeds 25 allowed). Consider refactoring.
Open

},{}],25:[function(require,module,exports){
'use strict';
module.exports = function generate_if(it, $keyword, $ruleType) {
  var out = ' ';
  var $lvl = it.level;
Severity: Major
Found in de.bund.bfr.knime.fsklab.deprecatednodes/js-src/de/bund/bfr/knime/fsklab/nodes/joiner/emfbundle/ajv.min.js - About 4 hrs to fix

Study has 32 methods (exceeds 20 allowed). Consider refactoring.
Open

public interface Study extends EObject {
    /**
     * Returns the value of the '<em><b>Study Identifier</b></em>' attribute.
     * <!-- begin-user-doc -->
     * <p>
Severity: Minor
Found in de.bund.bfr.knime.fsklab.metadata.model/gen/metadata/Study.java - About 4 hrs to fix

GeneralInformation has 32 methods (exceeds 20 allowed). Consider refactoring.
Open

public interface GeneralInformation extends EObject {
    /**
     * Returns the value of the '<em><b>Name</b></em>' attribute.
     * <!-- begin-user-doc -->
     * <p>
Severity: Minor
Found in de.bund.bfr.knime.fsklab.metadata.model/gen/metadata/GeneralInformation.java - About 4 hrs to fix

SettingsHelper has 32 methods (exceeds 20 allowed). Consider refactoring.
Open

public class SettingsHelper {

    
    protected static final String CFGKEY_ADDEDCONDITIONS = "AddedConditions";
    protected static final String CFGKEY_ADDEDCONDITIONVALUES = "AddedConditionValues";
Severity: Minor
Found in de.bund.bfr.knime.pmm.nodes/src/de/bund/bfr/knime/pmm/microbialdataedit/SettingsHelper.java - About 4 hrs to fix
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