Function execute has a Cognitive Complexity of 17 (exceeds 5 allowed). Consider refactoring.

Open

    protected function execute(InputInterface $input, OutputInterface $output)
    {
        $vcsOption = $input->getOption('vcs');
        $vcsOption = $vcsOption ? strtoupper($vcsOption) : '';
        if (! in_array($vcsOption, ['SVN', 'GIT', 'SRC'])) {

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Function php has a Cognitive Complexity of 16 (exceeds 5 allowed). Consider refactoring.

Open

function php()
{

    if (strtoupper(substr(PHP_OS, 0, 3)) === 'WIN') {
        $paths = `where php`;

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File Discovery.php has 252 lines of code (exceeds 250 allowed). Consider refactoring.

Open

<?php
// Copyright (c) 2016, Avan.Tech, et. al.
// Copyright (c) 2008, Luis Argerich, Garland Foster, Eduardo Polidor, et. al.
// All Rights Reserved. See copyright.txt for details and a complete list of authors.
// Licensed under the GNU LESSER GENERAL PUBLIC LICENSE. See license.txt for details.

File SetupCloneManagerCommand.php has 251 lines of code (exceeds 250 allowed). Consider refactoring.

Open

<?php

/**
 * @copyright (c) Copyright by authors of the Tiki Manager Project. All Rights Reserved.
 *     See copyright.txt for details and a complete list of authors.

Method setupDatabase has 50 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    public function setupDatabase(Database $database)
    {
        $tmp = tempnam($_ENV['TEMP_FOLDER'], 'dblocal');
        $dbFileContents = $this->generateDbFileContent($database);
        file_put_contents($tmp, $dbFileContents);

Method getSVNPath has 50 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    public function getSVNPath()
    {
        $host = $this->getHost();

        if (strtoupper(substr(PHP_OS, 0, 3)) === 'WIN') {

Method update has 50 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    public function update(string $targetFolder, string $branch, int $lag = 0)
    {
        $commitSHA = null;
        $fetchOptions = [];
        $time = time() - $lag * 60 * 60 * 24;

Method execute has 48 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    protected function execute(InputInterface $input, OutputInterface $output)
    {
        $instances = CommandHelper::getInstances('tiki');
        $instancesInfo = CommandHelper::getInstancesInfo($instances);
        $package = $input->getOption('package');

Method restoreFilesFromFolder has 48 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    protected function restoreFilesFromFolder(string $srcFolder)
    {
        $manifest = "{$srcFolder}/manifest.txt";
        $folders = $this->readManifest($manifest);

Function execute has a Cognitive Complexity of 15 (exceeds 5 allowed). Consider refactoring.

Open

    protected function execute(InputInterface $input, OutputInterface $output)
    {
        $instances = CommandHelper::getInstances('no-tiki');
        $instancesInfo = CommandHelper::getInstancesInfo($instances);

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Function getUpgradeVersion has a Cognitive Complexity of 15 (exceeds 5 allowed). Consider refactoring.

Open

    public function getUpgradeVersion(Instance $instance, bool $onlySupported, string $branch = null, Version $curVersion = null): ?Version
    {
        $curVersion = $curVersion ?: $instance->getLatestVersion();
        if ($instance->getApplication()) {
            $versions = $instance->getApplication()->getUpgradableVersions($curVersion, $onlySupported);

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Function prepareArgs has a Cognitive Complexity of 15 (exceeds 5 allowed). Consider refactoring.

Open

    public function prepareArgs($args)
    {
        $result = [];
        if (is_string($args)) {
            $args = preg_split('/  */', $args);

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Function getAvailableBranches has a Cognitive Complexity of 15 (exceeds 5 allowed). Consider refactoring.

Open

    public function getAvailableBranches()
    {
        $versions = [];
        $versionsTemp = [];

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Method loadEnvironmentVariablesContainingLogic has 47 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    private function loadEnvironmentVariablesContainingLogic()
    {
        $_ENV['TRIM_OS'] = strtoupper(substr(PHP_OS, 0, 3));

        if ($_ENV['TRIM_OS'] === 'WIN') {

Method execute has 46 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    protected function execute(InputInterface $input, OutputInterface $output)
    {
        $this->printManagerInfo();

        $this->io->title('New Instance Setup');

Method copyDirectories has 46 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    public function copyDirectories($targets, $backupDir)
    {
        $access = $this->getAccess();
        $backupDir = $backupDir ?: $this->backupDir;
        $result = [];

Method rsync has 44 lines of code (exceeds 25 allowed). Consider refactoring.

Open

    public function rsync($args = [])
    {
        $return_val = -1;
        if (empty($args['src']) || empty($args['dest'])) {
            return $return_val;

Function validateInstanceSelection has a Cognitive Complexity of 14 (exceeds 5 allowed). Consider refactoring.

Open

    public static function validateInstanceSelection($answer, $instances)
    {
        if (empty($answer)) {
            throw new \RuntimeException(
                'You must select an instance #ID'

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Function interact has a Cognitive Complexity of 14 (exceeds 5 allowed). Consider refactoring.

Open

    protected function interact(InputInterface $input, OutputInterface $output)
    {
        $instances = CommandHelper::getInstances('tiki');
        $instances = array_filter($instances, function ($instance) {
            return $instance->vcs_type == 'git';

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Function getLocalCheckouts has a Cognitive Complexity of 14 (exceeds 5 allowed). Consider refactoring.

Open

    public function getLocalCheckouts()
    {
        $access = $this->instance->getBestAccess('scripting');
        $access->chdir($this->instance->webroot);
        $command = $access->createCommand('find', ['.', '-type', 'd', '-name', '.git']);

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