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TimothyStiles/poly

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synthesis/fragment/fragment.go

Summary

Maintainability
A
0 mins
Test Coverage

Function optimizeOverhangIteration has a Cognitive Complexity of 24 (exceeds 20 allowed). Consider refactoring.
Wontfix

func optimizeOverhangIteration(sequence string, minFragmentSize int, maxFragmentSize int, existingFragments []string, existingOverhangs []string) ([]string, float64, error) {
    // If the sequence is smaller than maxFragment size, stop iteration.
    if len(sequence) < maxFragmentSize {
        existingFragments = append(existingFragments, sequence)
        return existingFragments, SetEfficiency(existingOverhangs), nil
Severity: Minor
Found in synthesis/fragment/fragment.go - About 55 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function NextOverhangs has a Cognitive Complexity of 23 (exceeds 20 allowed). Consider refactoring.
Wontfix

func NextOverhangs(currentOverhangs []string) ([]string, []float64) {
    currentOverhangMap := make(map[string]bool)
    for _, overhang := range currentOverhangs {
        currentOverhangMap[overhang] = true
    }
Severity: Minor
Found in synthesis/fragment/fragment.go - About 45 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function optimizeOverhangIteration has 5 arguments (exceeds 4 allowed). Consider refactoring.
Wontfix

func optimizeOverhangIteration(sequence string, minFragmentSize int, maxFragmentSize int, existingFragments []string, existingOverhangs []string) ([]string, float64, error) {
Severity: Minor
Found in synthesis/fragment/fragment.go - About 35 mins to fix

    Function optimizeOverhangIteration has 5 return statements (exceeds 4 allowed).
    Wontfix

    func optimizeOverhangIteration(sequence string, minFragmentSize int, maxFragmentSize int, existingFragments []string, existingOverhangs []string) ([]string, float64, error) {
    // If the sequence is smaller than maxFragment size, stop iteration.
    if len(sequence) < maxFragmentSize {
        existingFragments = append(existingFragments, sequence)
        return existingFragments, SetEfficiency(existingOverhangs), nil
    Severity: Major
    Found in synthesis/fragment/fragment.go - About 35 mins to fix

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