Function add_function_signature_help has a Cognitive Complexity of 50 (exceeds 5 allowed). Consider refactoring.

Open

def add_function_signature_help(specification: dict) -> dict:
    """Add function signature help

    Simplify the function signatures for presentation to BEL Editor users
    """

• Read up
  Read up

Function enhance_function_signatures has a Cognitive Complexity of 40 (exceeds 5 allowed). Consider refactoring.

Open

def enhance_function_signatures(specification: Mapping[str, Any]) -> Mapping[str, Any]:
    """Enhance function signatures

    Add required and optional objects to signatures objects for semantic validation
    support.

• Read up
  Read up

File enhance.py has 258 lines of code (exceeds 250 allowed). Consider refactoring.

Open

"""Enhance the BEL Specification YAML file for easier use by BEL package"""
# Standard Library
import copy
import re
from typing import Any, List, Mapping

Avoid deeply nested control flow statements.

Open

                    if arg.get("optional", False) and arg.get("multiple", False) is False:
                        args_summary += "?"
                        if arg["type"] in ["NSArg"]:
                            text = f'Zero or one namespace argument of following type(s): {", ".join([val for val in arg["values"]])}'
                        elif arg["type"] == "StrArgNSArg":

Avoid deeply nested control flow statements.

Open

                    if arg["type"] in ["Function", "Modifier"]:
                        opt_args.extend(arg.get("values", []))
                    elif arg["type"] in ["StrArgNSArg", "NSArg", "StrArg"]:
                        opt_args.append(arg["type"])

Avoid deeply nested control flow statements.

Open

                    if arg.get("optional", False) and arg.get("multiple", False) is False:
                        args_summary += "?"
                        text = f'Zero or one of each function(s): {", ".join([val for val in arg["values"]])}'
                    elif arg.get("optional", False):
                        args_summary += "*"

Avoid deeply nested control flow statements.

Open

                    if arg["type"] in ["Function", "Modifier"]:
                        mult_args.extend(arg.get("values", []))
                    elif arg["type"] in ["NSArg"]:
                        # Complex and Composite signature has this
                        mult_args.extend(arg.get("values", []))

Avoid deeply nested control flow statements.

Open

                    if arg["type"] in ["Function", "Modifier"]:
                        pos_args.append(arg.get("values", []))
                    elif arg["type"] in ["StrArgNSArg", "NSArg", "StrArg"]:
                        pos_args.append(arg["type"])

Avoid deeply nested control flow statements.

Open

                    if arg["type"] in ["Function", "Modifier"]:
                        req_args.append(arg.get("values", []))
                    elif arg["type"] in ["StrArgNSArg", "NSArg", "StrArg"]:
                        req_args.append(arg["type"])

Function add_namespaces has a Cognitive Complexity of 6 (exceeds 5 allowed). Consider refactoring.

Open

def add_namespaces(specification):
    """Add namespace convenience keys, list, list_{short|long}, to_{short|long}"""

    for ns in specification["namespaces"]:
        specification["namespaces"][ns]["list"] = []

• Read up
  Read up