Sign upLogin

belbio/bel

View on GitHub
Star
bel/resources/namespace.py

Summary

Maintainability
C
1 day
Test Coverage

Function terms_iterator_for_arangodb has a Cognitive Complexity of 25 (exceeds 5 allowed). Consider refactoring.
Open

def terms_iterator_for_arangodb(f: IO, version: str):
    """Generator for loading namespace terms into arangodb"""

    species_list = settings.BEL_FILTER_SPECIES
Severity: Minor
Found in bel/resources/namespace.py - About 3 hrs to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

File namespace.py has 310 lines of code (exceeds 250 allowed). Consider refactoring.
Open

# Standard Library
import copy
import gzip
import json
import time
Severity: Minor
Found in bel/resources/namespace.py - About 3 hrs to fix

    Function terms_iterator_for_elasticsearch has a Cognitive Complexity of 15 (exceeds 5 allowed). Consider refactoring.
    Open

    def terms_iterator_for_elasticsearch(f: IO, index_name: str, metadata: dict):
    """Add index_name to term documents for bulk load"""

    species_list = settings.BEL_FILTER_SPECIES
    Severity: Minor
    Found in bel/resources/namespace.py - About 1 hr to fix

    Cognitive Complexity

    Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

    A method's cognitive complexity is based on a few simple rules:

    • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
    • Code is considered more complex for each "break in the linear flow of the code"
    • Code is considered more complex when "flow breaking structures are nested"

    Further reading

    Function load_terms has a Cognitive Complexity of 12 (exceeds 5 allowed). Consider refactoring.
    Open

    def load_terms(
    f: IO, metadata: dict, force: bool = False, resource_download_url: Optional[str] = None
):
    """Load terms into Elasticsearch and ArangoDB
    Severity: Minor
    Found in bel/resources/namespace.py - About 1 hr to fix

    Cognitive Complexity

    Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

    A method's cognitive complexity is based on a few simple rules:

    • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
    • Code is considered more complex for each "break in the linear flow of the code"
    • Code is considered more complex when "flow breaking structures are nested"

    Further reading

    There are no issues that match your filters.

    Category
    Status