bio-miga/miga-web

<% root_name += "-" unless root_name == "" %>
<% medoids_file = File.expand_path("miga-project.medoids", root) %>
<% classif_file = File.expand_path("../miga-project.classif", root) %>
<% if File.exist? medoids_file %>
  <ul class="medoid-tree list-group">
  <% File.open(medoids_file, "r") do |f| %>
    <% i = 0 %>
    <% f.each_line do |ln| %>
      <% i += 1 %>
      <% sc_name = "#{root_name}#{i}" %>
      <% ln.chomp! %>
      <li class="list-group-item">
        <%= link_to(medoid_clade_url(project.id, metric, sc_name),
              :id => "link-#{metric}-#{root_name}#{i}",
              :remote => true, :"data-target" => "##{metric}-#{sc_name}",
              :"data-url" => medoid_clade_as_url(project.id,
                  metric, sc_name)) do %>
          <i class='glyphicon glyphicon-tree-deciduous'> </i>
          <%= metric %> clade <%= sc_name %>
        <% end %>
        <script>
          $('#link-<%= "#{metric}-#{sc_name}" %>').click(function(event) {
            var t = $($(this).data("target"));
            if(t.data('loaded')){
              t.toggle();
            }else{
              t.html("loading...");
          t.load($(this).data('url'));
              t.data('loaded', true);
            }
            event.preventDefault();
            event.stopPropagation();
          });
        </script>
    <span class="medoid">
      <%= link_to(
        "<i class='permalink glyphicon glyphicon-link'> </i>".html_safe,
        medoid_clade_url(project.id, metric, "#{root_name}#{i}"),
        title: "permalink") %>
      medoid: <%= link_to ln.unmiga_name,
        reference_dataset_url(project.id, ln) %>
    </span>
        <div id="<%= "#{metric}-#{root_name}#{i}" %>">
      <% if target =~ /^#{root_name}#{i}(-.+)?$/ %>
        <script>
              $('#<%= "#{metric}-#{root_name}#{i}" %>').data('loaded', true);
            </script>
            <%= render partial: "medoid_clade",
          locals: { project: project, result: result, metric: metric,
              target: target, root: "#{root}/miga-project.sc-#{i}",
              root_name: "#{root_name}#{i}" } %>
      <% end %>
    </div>
      </li>
    <% end %>
  <% end %>
  </ul>
<% elsif File.exist? classif_file %>
  <% lowest_class = root_name.split("-").last %>
  <% datasets = [] %>
  <% id = [] %>
  <% File.open(classif_file, "r") do |f| %>
    <% f.each_line do |ln| %>
      <% r = ln.chomp.split(/\t/) %>
      <% next unless r[1] == lowest_class %>
      <% datasets << r[0] %>
      <% id << r[3].to_f.round(2).to_s %>
    <% end %>
  <% end %>
  <div class="datasets list-group-item">
    <b><%= pluralize(datasets.size, "dataset") %>:</b>
    <%= datasets.map do |d| %>
      <% link_to(d.unmiga_name, reference_dataset_url(project.id, d)) +
        " <span class=medoid>(#{metric}: #{id.shift}%)</span>".html_safe %>
    <% end.to_sentence.html_safe %>
  </div>
<% end %>